| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN007J20 | Sequence | 568 | 007541 (7) | ref|XP_004516683.1| | 1e-66 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | |||||
| JMFN015A22 | Sequence | 625 | 007541 (7) | ref|XP_004516683.1| | 4e-72 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | |||||
| JMFN029O11 | Sequence | 623 | 007541 (7) | ref|XP_004516683.1| | 2e-70 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | |||||
| JMFN034J18 | Sequence | 582 | 007541 (7) | ref|XP_004516683.1| | 6e-67 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | |||||
| JMFN037L21 | Sequence | 522 | 007541 (7) | ref|XP_004516683.1| | 1e-66 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | |||||
| JMSF035L18 | Sequence | 566 | 007541 (7) | ref|XP_004516683.1| | 5e-67 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] | 514 | 007541 (7) | ref|XP_004516683.1| | 3e-67 | PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] |
This contig is upended
. : . : . : . : . : . :
JMFN015A22- GAGAGAGAACTAGTCTGGGXXXXXXXXXXXXXXXXXXXXAAAGAGAATACTGTAT
____________________________________________________________
consensus GAGAGAGAACTAGTCTGGGNNNNNNNNNNNNNNNNNNNNAAAGAGAATACTGTAT
. : . : . : . : . : . :
JMFN015A22- CTGAAAACTAAGTCTGGGAACTGGGAGGTTAAACAGGTATCTTGAATGAACATAAGGAAC
____________________________________________________________
consensus CTGAAAACTAAGTCTGGGAACTGGGAGGTTAAACAGGTATCTTGAATGAACATAAGGAAC
. : . : . : . : . : . :
JMFN015A22- GGGAAAACAAAAATAGCACTCCATACTAGACAGGTTGTTATAACAGAGATGTTTTTCATT
JMFN037L21- AACAGAGATGTTTTTCATT
JMSF035L18+ TAACAGAGATGTTTTTCATT
____________________________________________________________
consensus GGGAAAACAAAAATAGCACTCCATACTAGACAGGTTGTTATAACAGAGATGTTTTTCATT
. : . : . : . : . : . :
JMFN015A22- GAACAATGCCAAAATAGATTAGAAAATTTTGCAAACAATGACATTTTCATTTTTCTTGAG
JMFN037L21- GAACAATGCCAAAATAGATTAGAAAATTTTGCAAACAATGACATTTTCATTTTTCTTGAG
rJMSF035L18- AAATTTTGCAAACAATGACATTTTCATTTTTCTTGAG
JMSF035L18+ GAACAATGCCAAAATAGATTAGAAAATTTTGCAAACAATGACATTTTCATTTTTCTTGAG
____________________________________________________________
consensus GAACAATGCCAAAATAGATTAGAAAATTTTGCAAACAATGACATTTTCATTTTTCTTGAG
. : . : . : . : . : . :
JMFN015A22- AAATACAAAAACATCACTGCCAGCAGAAATTTCGCCATCCATTGCCTGTCTTACTGATCG
JMFN037L21- AAATACAAAAACATCACTGCCAGCAGAAATTTCGCCATCCATTGCCTGTCTTACTGATCG
rJMSF035L18- AAATACAAAAACATCACTGCCAGCAGAAATTTCGCCATCCATTGCCTGTCTTACTGATCG
JMFN007J20+ TCTTACTGATCG
JMSF035L18+ AAATACAAAAACATCACTGCCAGCAGAAATTTCGCCATCCATTGCCTGTCTTACTGATCG
JMFN034J18+ TCTTACTGATCG
____________________________________________________________
consensus AAATACAAAAACATCACTGCCAGCAGAAATTTCGCCATCCATTGCCTGTCTTACTGATCG
. : . : . : . : . : . :
JMFN015A22- CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
JMFN037L21- CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
rJMSF035L18- CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
JMFN007J20+ CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
JMSF035L18+ CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
JMFN029O11+ CATGCTCTTAATAATATCCGAATCACCCGGGTCAATAATGCTGAGGCAGCACACT
JMFN034J18+ CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
____________________________________________________________
consensus CTCGGCATGCTCTTAATGATATCAGAATCGCCAGGATCTATAATGCTGAGGCAGCATACC
. : . : . : . : . : . :
JMFN015A22- CGGTAATATTTACCACAAGCAGTCCCAAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
JMFN037L21- CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
rJMSF035L18- CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
JMFN007J20+ CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
JMSF035L18+ CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
JMFN029O11+ CTGAAATATTTACCACATGCAGTCCCCAAATCCACGTTGTTTCCATTGTAGTGGTGAACT
JMFN034J18+ CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
____________________________________________________________
consensus CGGTAATATTTACCACAAGCAGTCCCCAAATCTACGTTGTTTCCATTGTAGTGGTGAACA
. : . : . : . : . : . :
JMFN015A22- CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
JMFN037L21- CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
rJMSF035L18- CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
JMFN007J20+ CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
JMSF035L18+ CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
JMFN029O11+ CCAACCTTTGCCAACATAGCATAGTACTCTATCTCAGACTTCCTGAGGGGAGGGCAGTTG
JMFN034J18+ CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
____________________________________________________________
consensus CCAACCTTCGCCAACATAGCATAGTACTCTATTTCCGACTTCCTGAGTGGAGGACAGTTG
. : . : . : . : . : . :
JMFN015A22- TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
JMFN037L21- TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
rJMSF035L18- TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
JMFN007J20+ TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
JMSF035L18+ TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
JMFN029O11+ TTGGAAATGATAATCAATTTCCCTTTGGAACTTCTGAGGGACTTGAGAACGGTCTTGTAT
JMFN034J18+ TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
____________________________________________________________
consensus TTGGCAATGATAATCAATTTCCCTTTCGAGCTTCTGAGGGACTTGAGGACGGTTTTGTAT
. : . : . : . : . : . :
JMFN015A22- CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
JMFN037L21- CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
rJMSF035L18- CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
JMFN007J20+ CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
JMSF035L18+ CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
JMFN029O11+ CCCAGTGTGTACTTGCCGCTCTTCATGACCAGAGCTAGCCTATTGTTAATACTCTCATGA
JMFN034J18+ CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
____________________________________________________________
consensus CCCAATGTGTATTTTCCACTCTTCATAACAAGAGCTAACCTATTGTTAATGCTCTCATGA
. : . : . : . : . : . :
JMFN015A22- GTCTTCTTGGTCTTCTTGGCTGCAACCATG
JMFN037L21- GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
rJMSF035L18- GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
JMFN007J20+ GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
JMSF035L18+ GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
JMFN029O11+ GTCTTCTTGGTCTTCTTGGCTGCAACCATGGT
JMFN034J18+ GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
____________________________________________________________
consensus GTCTTCTTGGTCTTCTTGGCTGCAACCATGGTGGCGCTTTGGCTAGGACCGGCGATTGGA
. : . : . : . : . : . :
JMFN037L21- ACACTGCAATGCACTCCTGAAAC
rJMSF035L18- ACACTGCAATGCACTCCTGAAACCGAGCGAGCCGATTGCGGCGGAGAGGCGACCCT
JMFN007J20+ ACACTGCAATGCACTCCTGAAACCGAGCGAG
JMSF035L18+ ACACTGCAATGCACTCCTGAAACCGAGCGAGCCGATTGCGGCGGAGAGGCGACCCT
JMFN034J18+ ACACTGCAATGCACTCCTGAAACCGAGCGAGCCGATTGCGGCGGAGAGGCGACCCTGAAA
____________________________________________________________
consensus ACACTGCAATGCACTCCTGAAACCGAGCGAGCCGATTGCGGCGGAGAGGCGACCCTGAAA