| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009F20 | Sequence | 443 | 007540 (5) | ref|XP_011077495.1| | 2e-30 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu | 422 | 007540 (5) | ref|XP_011077495.1| | 1e-30 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu |
| JMFN034I11 | Sequence | 556 | 007540 (5) | ref|XP_011077495.1| | 6e-30 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu | |||||
| JMSF027D07 | Sequence | 629 | 002135 (5) | ref|XP_009783102.1| | 1e-17 | PREDICTED: polyadenylate-binding protein-interacting protein 7 [Nicotiana sylve | 561 | 007540 (5) | ref|XP_011077495.1| | 4e-30 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu |
| JMSF028D07 | Sequence | 355 | 007540 (5) | gb|KHG23652.1| | 4e-29 | hypothetical protein F383_01425 [Gossypium arboreum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF027D07+ GGACGATAAGCCCAAATCTGATACCGGATAAAAGCGATCTGCAAGGAGGG
JMFN034I11- CGATCTGCAAGGAGGG
____________________________________________________________
consensus GGACGATAAGCCCAAATCTGATACCGGATAAAAGCGATCTGCAAGGAGGG
. : . : . : . : . : . :
JMFF009F20- GAGAGAGAAGAAGAAGAAGAAGAAGAAAAATGGCGTTGGTGTGGTTGGAAGCT
rJMSF027D07+ AGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAAAATGGCGTTGGTGTGGTTGGAAGCT
rJMFF009F20+ GAGAGAGAAGAAGAAGAAGAAGAAGAAAAATGGCGTTGGTGTGGTTGGAAGCT
JMFN034I11- AGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAAAATGGCGTTGGTGTGGTTGGAAGCT
____________________________________________________________
consensus AGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAAAATGGCGTTGGTGTGGTTGGAAGCT
. : . : . : . : . : . :
JMFF009F20- GCACTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
rJMSF027D07+ GCACTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
rJMSF028D07+ CTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
rJMFF009F20+ GCACTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
JMFN034I11- GCACTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
____________________________________________________________
consensus GCACTGCCTTTGGGGATTATCGCCGGCATGCTCTGCGTCGCCGGAAATATTCAGTACTTC
. : . : . : . : . : . :
JMFF009F20- GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
rJMSF027D07+ GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
rJMSF028D07+ GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
rJMFF009F20+ GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
JMFN034I11- GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
____________________________________________________________
consensus GTCCACAAGGCATATCATGGCCGGCCGAAGCATATCGGAAACGACGTTTGGGACGTAGCT
. : . : . : . : . : . :
JMFF009F20- ATGGAAAGGCGGGACAAGAAGCTTGTTGAGATGCTTTCAGCTCCTCCTCCTTCTGATTAG
rJMSF027D07+ ATGGAAAGGCGGGACAAGAAGCTTGTTGAGATGCTTTCAGCTCCTCCTCCTTCTGATTAG
rJMSF028D07+ ANGGAAAGGCGGGACAAGAAGCTTGTTGAGANGCTTTCAGCTCCTCCTCGTTCTGATTAG
rJMFF009F20+ ATGGAAAGGCGGGACAAGAAGCTTGTTGAGATGCTTTCAGCTCCTCCTCCTTCTGATTAG
JMFN034I11- ATGGAAAGGCGGGACAAGAAGCTTGTTGAGATGCTTTCAGCTCCTCCTCCTTCTGATTAG
____________________________________________________________
consensus ATGGAAAGGCGGGACAAGAAGCTTGTTGAGATGCTTTCAGCTCCTCCTCCTTCTGATTAG
. : . : . : . : . : . :
JMFF009F20- ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGACGAATAAGATATTTTCAAA
rJMSF027D07+ ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGACGAATAAGATATTTTCAAA
rJMSF028D07+ ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGNCGAATAAGATNTTTTCAAA
rJMFF009F20+ ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGACGAATAAGATATTTTCAAA
JMFN034I11- ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGACGAATAAGATATTTTCAAA
____________________________________________________________
consensus ATCCCTTCGCCTTTCTGATCCCCCTTTCAACAGGCTGAAGACGAATAAGATATTTTCAAA
. : . : . : . : . : . :
JMFF009F20- ATTGTTGTCAGTTGCTGAAGTTGTAATTGAAGTTGCAGAGGCATGTATTCTTGGTTTCTT
rJMSF027D07+ ATTGTTGTCAGTTGCTGAAGTTGTAATTGAAGTTGCAGAGGCATGTATTCTTGGTTTCTT
rJMSF028D07+ ATTGTTGTCAGTTGNTNAAGTAGTAATT
rJMFF009F20+ ATTGTTGTCAGTTGCTGAAGTTGTAATTGAAGTTGCAGAGGCATGTATTCTTGGTTTCTT
JMFN034I11- ATTGTTGTCAGTTGCTGAAGTTGTAATTGAAGTTGCAGAGGCATGTATTCTTGGTTTCTT
____________________________________________________________
consensus ATTGTTGTCAGTTGCTGAAGTTGTAATTGAAGTTGCAGAGGCATGTATTCTTGGTTTCTT
. : . : . : . : . : . :
JMFF009F20- ATTTTACTTTCAAAGATGGCGTGAACATGGTGCAATATTACTTTTTATCTGGAAAAAATG
rJMSF027D07+ ATTTTACTTTCAAAGATGGCGTGAACATGGTGCAATATTACTTTTTATCTGGAAAAAATG
rJMFF009F20+ ATTTTACTTTCAAAGATGGCGTGAACATGGTGCAATATTACTTTTTATCTNGAAAAAA
JMFN034I11- ATTTTACTTTCAAAGATGGCGTGAACATGGTGCAATATTACTTTTTATCTGGAAAAAATG
____________________________________________________________
consensus ATTTTACTTTCAAAGATGGCGTGAACATGGTGCAATATTACTTTTTATCTGGAAAAAATG
. : . : . : . : . : . :
JMFF009F20- TCAGAAGGATGTTTCAAATTA
rJMSF027D07+ TCAGAAGGATGTTTCAAATTATGGTCAAAATTTCACTGGATCTTCTATTTTAGCCTCTTC
JMFN034I11- TCAGAAGGATGTTTCAAATTATGGTCAAAATTTCACTGGATCTTCTATTTTAGCCTCTTC
____________________________________________________________
consensus TCAGAAGGATGTTTCAAATTATGGTCAAAATTTCACTGGATCTTCTATTTTAGCCTCTTC
. : . : . : . : . : . :
rJMSF027D07+ AGATAGTGATGTCGTATGCTTTCTTGACGAG
JMFN034I11- AGATAGTGATGTCGTATGCTTTCTTGACGAGTTAATATCCAATATAGTCCTCGATTATAG
____________________________________________________________
consensus AGATAGTGATGTCGTATGCTTTCTTGACGAGTTAATATCCAATATAGTCCTCGATTATAG