clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002D10 | Sequence | 586 | 000621 (10) | ref|XP_009790112.1| | 9e-74 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | 756 | 007538 (8) | ref|XP_009790112.1| | 3e-123 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMFF010B05 | Sequence | 576 | 000621 (10) | ref|XP_009790112.1| | 7e-59 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | 790 | 007538 (8) | ref|XP_009790112.1| | 2e-136 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMFF017B02 | Sequence | 582 | 000621 (10) | ref|XP_009790112.1| | 4e-60 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | 771 | 007538 (8) | ref|XP_009790112.1| | 9e-126 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMFF040F11 | Sequence | 526 | 000621 (10) | ref|XP_009790112.1| | 3e-58 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | 122 | 007538 (8) | ref|XP_009790112.1| | 2e-13 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMFF048B13 | Sequence | 268 | 000621 (10) | ref|XP_009593287.1| | 2e-07 | PREDICTED: aldehyde dehydrogenase [Nicotiana tomentosiformis] | 376 | 007538 (8) | ref|XP_009790112.1| | 7e-41 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMFN032P23 | Sequence | 516 | 007538 (8) | ref|XP_009790112.1| | 2e-63 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | |||||
JMSF004K23 | Sequence | 384 | 000621 (10) | ref|XP_009790112.1| | 2e-25 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] | 361 | 007538 (8) | ref|XP_009790112.1| | 6e-17 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
JMSF008E19 | Sequence | 452 | 000621 (10) | ref|XP_004242034.1| | 2e-28 | PREDICTED: aldehyde dehydrogenase family 3 member H1 [Solanum lycopersicum] | 746 | 007538 (8) | ref|XP_009790112.1| | 2e-128 | PREDICTED: aldehyde dehydrogenase [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF010B05+ TTATTGCAGNCAAGTGGGGCTG
____________________________________________________________
consensus TTATTGCAGNCAAGTGGGGCTG
. : . : . : . : . : . :
rJMSF008E19+ TGTATTGCCCCTGATTACATCATTACTACAAAAGAGAATGCACT
rJMFF010B05+ CANCAGTGGACAAGCTTGTATTGCCCCTGATTACATCATTACTACAAAAGAGAATGCACT
rJMFF017B02+ TGTATTGCCCGTGATTACATCATTACTACAAAAGAGAATGCACT
rJMFF002D10+ TTACATCATTACTACAAAAGAGAATGCACT
____________________________________________________________
consensus CANCAGTGGACAAGCTTGTATTGCCCCTGATTACATCATTACTACAAAAGAGAATGCACT
. : . : . : . : . : . :
rJMSF008E19+ ACAGTTGCTTGATGCCATGAAAGTAGAACTAGATAAATTCTATGGAAAGGACCCATTATG
rJMFF010B05+ ACAGTTGCTTGATGCCATGAAAGTAGAACTAGATAAATTCTATGGAAAGGACCCATTATG
rJMFF017B02+ ACAGTTGCTTGATGCCATGAAAGTAGAACTAGATAAATTCTATGGAAAGGACCCATTATG
rJMFF002D10+ ACAGTTGCTTGATGCCATGAAAGTAGAACTAGATAAATTCTATGGAAAGGACCCATTATG
____________________________________________________________
consensus ACAGTTGCTTGATGCCATGAAAGTAGAACTAGATAAATTCTATGGAAAGGACCCATTATG
. : . : . : . : . : . :
rJMSF008E19+ TTCAAAAGATCTGTCTCGCATTGTAAATTCCAATCACTTCTCCCGCTTAACAAAGTTACT
rJMFF010B05+ TTCAAAAGATCTGTCTCGCATTGTAAATTCCAATCACTTCTCCCGCTTAACAAAGTTACT
rJMFF017B02+ TTCAAAAGATCTGTCTCGCATTGTAAATTCCAATCACTTCTCCCGCTTAACAAAGTTACT
rJMFF002D10+ TTCAAAAGATCTGTCTCGCATTGTAAATTCCAATCACTTCTCCCGCTTAACAAAGTTACT
____________________________________________________________
consensus TTCAAAAGATCTGTCTCGCATTGTAAATTCCAATCACTTCTCCCGCTTAACAAAGTTACT
. : . : . : . : . : . :
rJMSF008E19+ AGATGATGATAAGGTTTCAGGTAAGATAGTCCATGGAGGTGAACGAGATGAAAAGAGACT
rJMFF010B05+ AGATGATGATAAGGTTTCAGGTAAGATAGTCCATGGAGGTGAACGAGATGAAAAGAGACT
rJMFF017B02+ AGATGATGATAAGGTTTCAGGTAAGATAGTCCATGGAGGTGAACGAGATGAAAAGAGACT
rJMFF002D10+ AGATGATGATAAGGTTTCAGGTAAGATAGTCCATGGAGGTGAACGAGATGAAAAGAGACT
____________________________________________________________
consensus AGATGATGATAAGGTTTCAGGTAAGATAGTCCATGGAGGTGAACGAGATGAAAAGAGACT
. : . : . : . : . : . :
rJMSF008E19+ AAAGATTGCTCCTACCATTTTGATGGATGTGCCAGAAGACGCCCTAATCATGAAAGAGGA
rJMFF010B05+ AAAGATTGCTCCTACCATTTTGATGGATGTGCCAGAAGACGCCCTAATCATGAAAGAGGA
rJMFF017B02+ AAAGATTGCTCCTACCATTTTGATGGATGTGCCAGAAGACGCCCTAATCATGAAAGAGGA
rJMFF002D10+ AAAGATTGCTCCTACCATTTTGATGGATGTGCCAGAAGACGCCCTAATCATGAAAGAGGA
____________________________________________________________
consensus AAAGATTGCTCCTACCATTTTGATGGATGTGCCAGAAGACGCCCTAATCATGAAAGAGGA
. : . : . : . : . : . :
rJMSF008E19+ AATATTTGGTCCTCTACTTCCTATTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
rJMFF010B05+ AATATTTGGTCCTCTACTTCCTATTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
rJMFF017B02+ AATATTTGGTCCTCTACTTCCTATTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
rJMFF002D10+ AATATTTGGTCCTCTACTTCCTATTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
JMFN032P23- TTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
____________________________________________________________
consensus AATATTTGGTCCTCTACTTCCTATTCTCACAGTCAATAAAGTGGAGGACGGTATAAAAAT
. : . : . : . : . : . :
rJMSF004K23+ GCAGCATATCTGTTCNCAAGCAGCANAAACCNGGA
rJMSF008E19+ CATTAACGCTAGAGACAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAAAAACTGGA
rJMFF010B05+ CATTAACGCTAGAGACAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAAAAACTGGA
rJMFF017B02+ CATTAACGCTAGAGACAAGCCACTTGCAGCANTTCTGTTCACAAGCAACAAAAAACTGGA
rJMFF002D10+ CATTAACGCTAGAGACAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAAAAACTGGA
JMFN032P23- CATTAACGCTAGAGACAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAAAAACTGGA
____________________________________________________________
consensus CATTAACGCTAGAGACAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAAAAACTGGA
. : . : . : . : . : . :
rJMSF004K23+ GCAGGAGTGTGTTACNAATTTNTCAGCTGGGGGCTTNGCTTATTAATGACACAGCTTTGC
rJMSF008E19+ GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
rJMFF010B05+ GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
rJMFF017B02+ GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
rJMFF002D10+ GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
rJMFF048B13+ AAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
JMFN032P23- GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
____________________________________________________________
consensus GCAGGAGTTTGTTACAAATTTATCAGCTGGGGGCTT-GCTTATTAATGACACAGCTTTGC
. : . : . : . : . : . :
rJMSF004K23+ ATGTTGCAGTCCACACGNTGCCGNTNGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
rJMFF040F11+ GCCGTTTGGNGGAGTAGGAGAAAGNGGAACAGGTTCATACC
rJMSF008E19+ ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
rJMFF010B05+ ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
rJMFF017B02+ ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
rJMFF002D10+ ATGTTGCAGTCCACACGCTGCCGTTTGCAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
rJMFF048B13+ ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
JMFN032P23- ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
____________________________________________________________
consensus ATGTTGCAGTCCACACGCTGCCGTTTGGAGGAGTAGGAGAAAGCGGAACAGGTTCATACC
. : . : . : . : . : . :
rJMSF004K23+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACANGANGGCAGTCNTGAAACGTAGTTTTG
rJMFF040F11+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACNNGAAGGCAGTCNTGAAACGTAGTTTTG
rJMSF008E19+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
rJMFF010B05+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
rJMFF017B02+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
rJMFF002D10+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
rJMFF048B13+ ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
JMFN032P23- ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
____________________________________________________________
consensus ATGGCAAATTCTCGTTTGAAGCTTTCAGCCACAAGAAGGCAGTCCTGAAACGTAGTTTTG
. : . : . : . : . : . :
rJMSF004K23+ GTGNAGATTNGGGTGCAAGATACCCNCCCTATACACNTAAGAAGGCACNACTTCTGAGAG
rJMFF040F11+ GTGGAGATTNGGGTNCAAGAT
rJMSF008E19+ GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
rJMFF010B05+ GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
rJMFF017B02+ GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
rJMFF002D10+ GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
rJMFF048B13+ GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
JMFN032P23- GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
____________________________________________________________
consensus GTGGAGATTTGGGTGCAAGATACCCACCCTATACACCTAAGAAGGCACGACTTCTGAGAG
. : . : . : . : . : . :
rJMSF004K23+ CACTAATGAGTNGAAATCTGATTTTCATAATTCGCGCANTACNTNGCTTGTAAATATATG
rJMSF008E19+ CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
rJMFF010B05+ CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
rJMFF017B02+ CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
rJMFF002D10+ CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
rJMFF048B13+ CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
JMFN032P23- CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
____________________________________________________________
consensus CACTAATGAGTGGAAATCTGATTTTCATAATTCGCGCATTACTTGGCTTGTAAATATATG
. : . : . : . : . : . :
rJMSF004K23+ TTGTNTATATTTGGGACCCCCAAATT
rJMSF008E19+ TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAAT
rJMFF010B05+ TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGT
rJMFF017B02+ TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGTTTGTCCATATT
rJMFF002D10+ TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGTTTGTCCATATT
rJMFF048B13+ TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGTTTGTCCATATT
JMFN032P23- TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGTTTGTCCATATT
____________________________________________________________
consensus TTGTTTATATTTGGGACCCCCAAATTGTTGAAACTTGAATAATTGTTGTTTGTCCATATT
. : . : . : . : . : . :
rJMFF017B02+ GTGATAT
rJMFF002D10+ GTGATAT
rJMFF048B13+ GTGATATTGTTGAATGCATGTGAACTTAAGAC
JMFN032P23- GTGATATTGTTGAATGCATGTGAACTTAAGACATTGAAAGTTTAGTGGTATATTTGATTT
____________________________________________________________
consensus GTGATATTGTTGAATGCATGTGAACTTAAGACATTGAAAGTTTAGTGGTATATTTGATTT