Contig 007532:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026I08Sequence492018438ref|XP_011095192.1|4e-07PREDICTED: probable protein phosphatase 2C 38 [Sesamum indicum]782007532 (2)ref|XP_004249804.1|5e-94PREDICTED: probable protein phosphatase 2C 38 isoform X2 [Solanum lycopersicum]
JMFN020M04Sequence598007532 (2)ref|XP_009801002.1|2e-40PREDICTED: probable protein phosphatase 2C 38 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF026I08+                                                         TAATATTGAAGCC
                      ____________________________________________________________
consensus                                                            TAATATTGAAGCC
 
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rJMFF026I08+          GTGAGAGATGAGCTTCGCTCATTGCATCCCCACGACTCGCAAATTGTGGTTCGAAAGCAC
                      ____________________________________________________________
consensus             GTGAGAGATGAGCTTCGCTCATTGCATCCCCACGACTCGCAAATTGTGGTTCGAAAGCAC
 
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rJMFF026I08+          AATGTTTGGCGTGTGAAGGGTCTTATACAGGTCTCGAGGTCCATTGGTGATGCCTACCTT
                      ____________________________________________________________
consensus             AATGTTTGGCGTGTGAAGGGTCTTATACAGGTCTCGAGGTCCATTGGTGATGCCTACCTT
 
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rJMFF026I08+          AAGAAGGCGGAATTCAACCGAGCACCACTATTGGCAAAATTTAGGTTATCTGAACCCTTC
                      ____________________________________________________________
consensus             AAGAAGGCGGAATTCAACCGAGCACCACTATTGGCAAAATTTAGGTTATCTGAACCCTTC
 
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rJMFF026I08+          TCCAACCCGATCCTTAGTCCCGAACCATCCATTTCTATCCACAAACTCAGCTCCAACGAC
                      ____________________________________________________________
consensus             TCCAACCCGATCCTTAGTCCCGAACCATCCATTTCTATCCACAAACTCAGCTCCAACGAC
 
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rJMFF026I08+          CAATTCCTCATATTTGCTTCGGATGGTCTGTGGGAGCACCTTAGCAACCAGGAAGCAGCT
JMFN020M04+             ATTCCTCATATTTGCTTCGGATGGTCTGTGGGAGCACCTTAGCAACCAGGAAGCAGCT
                      ____________________________________________________________
consensus             CAATTCCTCATATTTGCTTCGGATGGTCTGTGGGAGCACCTTAGCAACCAGGAAGCAGCT
 
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rJMFF026I08+          GACATCGTTCACAGTTCCCCTCGTAATGGAATTGCTAGAAGACTTATCAAAGCAGCACTT
JMFN020M04+           GACATCGTTCACAGTTCCCCTCGTAATGGAATTGCTAGAAGACTTATCAAAGCAGCACTT
                      ____________________________________________________________
consensus             GACATCGTTCACAGTTCCCCTCGTAATGGAATTGCTAGAAGACTTATCAAAGCAGCACTT
 
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rJMFF026I08+          CACGTGGCAGCCAAGAAAAGAGAAATGCGGTACTCGGACCTGAAGAAGATCGAAAGAGGC
JMFN020M04+           CACGTGGCAGCCAAGAAAAGAGAAATGCGGTACTCGGACCTGAAGAAGATCGAAAGAGGC
                      ____________________________________________________________
consensus             CACGTGGCAGCCAAGAAAAGAGAAATGCGGTACTCGGACCTGAAGAAGATCGAAAGAGGC
 
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rJMFF026I08+          GTGAGGAGGCATTTCCACGACGACATTACAGTTGTGGTGCTGTTTTTAGATCCCGGTTCC
JMFN020M04+           GTGAGGAGGCATTTCCACGACGACATTACAGTTGTGGTGCTGTTTTTAGATCCCGGTTCC
                      ____________________________________________________________
consensus             GTGAGGAGGCATTTCCACGACGACATTACAGTTGTGGTGCTGTTTTTAGATCCCGGTTCC
 
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rJMFF026I08+          ACGAGTCGAAGCTCCTCGCATATTTCCACCCTTTCAATTAGAGCGGGTGGAGGCATACCT
JMFN020M04+           ACGAGTCGAAGCTCCTCGCATATTTCCACCCTTTCAATTAGAGCGGGTGGAGGCATACCT
                      ____________________________________________________________
consensus             ACGAGTCGAAGCTCCTCGCATATTTCCACCCTTTCAATTAGAGCGGGTGGAGGCATACCT
 
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rJMFF026I08+          CCTTATCCAACGCAGTAATCTTCAGCATAAATGTTGTACTGTATGATGCAGTTTATCTTA
JMFN020M04+           CCTTATCCAACGCAGTAATCTTCAGCATAAATGTTGTACTGTATGATGCAGTTTATCTTA
                      ____________________________________________________________
consensus             CCTTATCCAACGCAGTAATCTTCAGCATAAATGTTGTACTGTATGATGCAGTTTATCTTA
 
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rJMFF026I08+          CTGCATAGACAACAAGAAAAAGTCTTTCTATTCTTTGTATCCTTTTCAGGTTAGAAGGAG
JMFN020M04+           CTGCATAGACAACAAGAAAAAGTCTTTCTATTCTTTGTATCCTTTTCAGGTTAGAAGGAG
                      ____________________________________________________________
consensus             CTGCATAGACAACAAGAAAAAGTCTTTCTATTCTTTGTATCCTTTTCAGGTTAGAAGGAG
 
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rJMFF026I08+          ATAGTAGAATCCATTTCACAGTAAGTGGAAACTGATCTTCTCTAGATTCAAAGTCGAGAA
JMFN020M04+           ATAGTAGAATCCATTTCACAGTAAGTGGAAACTGATCTTCTCTAGATTCAAAGTCGAGAA
                      ____________________________________________________________
consensus             ATAGTAGAATCCATTTCACAGTAAGTGGAAACTGATCTTCTCTAGATTCAAAGTCGAGAA
 
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rJMFF026I08+          TTATTATTATTATTATCGGCATGTATATATGAAATGTTCTGCATTTCCT           
JMFN020M04+           TTATTATTATTATTATCGGCATGTATATATGAAATGTTCTGCATTTCCTTTAAATAAAAA
                      ____________________________________________________________
consensus             TTATTATTATTATTATCGGCATGTATATATGAAATGTTCTGCATTTCCTTTAAATAAAAA
 
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JMFN020M04+           GTGGATGCTTCTAACTTGCATXXXXXXXXXXXXXXXXXXXXXXXCTCGAGACGAGTTCTC
                      ____________________________________________________________
consensus             GTGGATGCTTCTAACTTGCATNNNNNNNNNNNNNNNNNNNNNNNCTCGAGACGAGTTCTC