Contig 007530:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037N10Sequence624007530 (2)ref|XP_002325383.2|2e-63hypothetical protein POPTR_0019s04080g [Populus trichocarpa] gb|EEE99764.2| hypo790020224gb|KHN14799.1|8e-94hypothetical protein glysoja_020972 [Glycine soja]
JMFN019K09Sequence630007530 (2)ref|XP_006577326.1|62.4PREDICTED: uncharacterized protein LOC100805566 [Glycine max] gb|KHN35330.1| hyp

Alignment

This contig is upended


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JMFF037N10+                                              TTTTTCCCAAAGTCGTAAAGAGACT
                      ____________________________________________________________
consensus                                                TTTTTCCCAAAGTCGTAAAGAGACT
 
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JMFF037N10+           TGGCCCTCAACACATCGTGCACCGTGCTCCGCCGTATCGGCACCGTGCCTTTGGGGCAGC
                      ____________________________________________________________
consensus             TGGCCCTCAACACATCGTGCACCGTGCTCCGCCGTATCGGCACCGTGCCTTTGGGGCAGC
 
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JMFF037N10+           GCAGCCCGTTCCGGTGCCACAGCTGCGGCACGCCGCCGCCGCCGCTACTATTCTTCATCG
                      ____________________________________________________________
consensus             GCAGCCCGTTCCGGTGCCACAGCTGCGGCACGCCGCCGCCGCCGCTACTATTCTTCATCG
 
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JMFF037N10+           TCTCATCTCTCACCGCATCCTCTTTCACCGTTTTCATCCTCGGCATTTCCGGCGGATCTC
                      ____________________________________________________________
consensus             TCTCATCTCTCACCGCATCCTCTTTCACCGTTTTCATCCTCGGCATTTCCGGCGGATCTC
 
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JMFF037N10+           TCTGGATCTTGTGATTCTTGAGAAGAGGATGATCTAGAGCTGGCTGTTTTCTTTTATGAA
                      ____________________________________________________________
consensus             TCTGGATCTTGTGATTCTTGAGAAGAGGATGATCTAGAGCTGGCTGTTTTCTTTTATGAA
 
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JMFF037N10+           CACAATCAATGATATCTCCATCTGGGCTCTGAATGGTGAGAACTGGGGGTTTGTTGATCT
JMFN019K09+                                         GAATGGTGAGAACTGNGGGTTTGTTGATCT
                      ____________________________________________________________
consensus             CACAATCAATGATATCTCCATCTGGGCTCTGAATGGTGAGAACTGGGGGTTTGTTGATCT
 
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JMFF037N10+           TGTCAAGATGCTTCTCAATCCTATCAAGCCTTAAGCTGCTGACATGTCTGTATCTTGTGT
JMFN019K09+           TGTCAAGATGCTTCTCAATCCTATCAAGCCTTAAGCTGCTGACATGTCTGTATCTTGTGT
                      ____________________________________________________________
consensus             TGTCAAGATGCTTCTCAATCCTATCAAGCCTTAAGCTGCTGACATGTCTGTATCTTGTGT
 
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JMFF037N10+           AGTTGAAGGTTTGGGTCTCAACAGCCTGAGACCTTTGCCAGAAGAACCAAAGAAAAAATG
JMFN019K09+           AGTTGAAGGTTTGGGTCTCAACAGCCTGAGACCTTTGCCAGAAGAACCAAAGAAAAAATG
                      ____________________________________________________________
consensus             AGTTGAAGGTTTGGGTCTCAACAGCCTGAGACCTTTGCCAGAAGAACCAAAGAAAAAATG
 
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JMFF037N10+           GCACCAGAAAAACAGAAGAAGAAGATCTTCTTCTTCTTCCAAAAATGACCATTTCATTCA
JMFN019K09+           GCACCAGAAAAACAGAAGAAGAAGATCTTCTTCTTCTTCCAAAAATGACCATTTCATTCA
                      ____________________________________________________________
consensus             GCACCAGAAAAACAGAAGAAGAAGATCTTCTTCTTCTTCCAAAAATGACCATTTCATTCA
 
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JMFF037N10+           TTGCCATAACAAAAGAATAAGAATTTCTTTAAGCCCAGAAAGAAAGGAGATCAAAAAAGG
JMFN019K09+           TTGCCATAACAAAAGAATAAGAATTTCTTTAAGCCCAGAAAGAAAGGAGATCAAAAAAGG
                      ____________________________________________________________
consensus             TTGCCATAACAAAAGAATAAGAATTTCTTTAAGCCCAGAAAGAAAGGAGATCAAAAAAGG
 
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JMFF037N10+           GTCTGAAAGAAAGCAAACTAGAAACCCATTAAGAGATGGAATTCCCAACTGCTAACCAC 
JMFN019K09+           GTCTGAAAGAAAGCAAACTAGAAACCCATTAAGAGATGGAATTCCCAACTGCTAACCACA
                      ____________________________________________________________
consensus             GTCTGAAAGAAAGCAAACTAGAAACCCATTAAGAGATGGAATTCCCAACTGCTAACCACA
 
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JMFN019K09+           AATTAAAGCTGAAAGCTCCCCGGCCTTAATATCGATCACCAACTAACGAACAGGGAATTG
                      ____________________________________________________________
consensus             AATTAAAGCTGAAAGCTCCCCGGCCTTAATATCGATCACCAACTAACGAACAGGGAATTG
 
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JMFN019K09+           AAATTGAAGAAAATCCAGAAAATGACTTTTGTATTTAATATATATATATATATAGTGATT
                      ____________________________________________________________
consensus             AAATTGAAGAAAATCCAGAAAATGACTTTTGTATTTAATATATATATATATATAGTGATT
 
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JMFN019K09+           TAAGTGTTGACAGAAATGAATGAAGAGAGGTGGGTGAAGCAGAATTAAGAAGGAGGAAAT
                      ____________________________________________________________
consensus             TAAGTGTTGACAGAAATGAATGAAGAGAGGTGGGTGAAGCAGAATTAAGAAGGAGGAAAT
 
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JMFN019K09+           GAATGAAGAACAGTAACTAGATAGCTAGCACAAAACCCCAAACATCTGCAGCTTCATCAT
                      ____________________________________________________________
consensus             GAATGAAGAACAGTAACTAGATAGCTAGCACAAAACCCCAAACATCTGCAGCTTCATCAT
 
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JMFN019K09+           GATTGATATTATATATCACCATCTCTGCATGGAATTTATATCCAAATATATATATTTATA
                      ____________________________________________________________
consensus             GATTGATATTATATATCACCATCTCTGCATGGAATTTATATCCAAATATATATATTTATA