Contig 007528:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052M07+                                                             TTTAAGTAAA
                      ____________________________________________________________
consensus                                                               TTTAAGTAAA
 
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rJMSF052M07-                                   CGAGTTCGATTCTTGCCAACATTCTCTCCTGTTAG
JMSF052M07+           ACATAATTCTCATATTAAAAAATCACGAGTTCGATTCTTGCCAACATTCTCTCCTGTTAG
                      ____________________________________________________________
consensus             ACATAATTCTCATATTAAAAAATCACGAGTTCGATTCTTGCCAACATTCTCTCCTGTTAG
 
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rJMSF052M07-          ACAGGATCTTCCTATCTGATTACACAGAAACGAAATTTACCCGATACAATGGTATATATA
rJMSF005G12-                                                                TATATN
JMSF052M07+           ACAGGATCTTCCTATCTGATTACACAGAAACGAAATTTACCCGATACAATGGTATATATA
JMFN018K10+                          CTGATTACACAGAAACGAANTTTACCCGATACAATGGTATATATA
                      ____________________________________________________________
consensus             ACAGGATCTTCCTATCTGATTACACAGAAACGAAATTTACCCGATACAATGGTATATATA
 
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rJMSF052M07-          CTCAGAATATATATAGAACACAACAACCAACAAAATAAGTAGTAAGGAATTGAGTGCACA
rJMSF005G12-          CTCGGAATATATATAGAACACANCAACCGANAAAATAAGTAGTAAGGANTTGAGTGCACN
JMSF052M07+           CTCAGAATATATATAGAACACAACAACCAACAAAATAAGTAGTAAGGAATTGAGTGCACA
JMFN018K10+           CTCAGAATATATATAGAACACAACAACCAACAAAATAAGTAGTAAGGAATTGAGTGCACA
                      ____________________________________________________________
consensus             CTCAGAATATATATAGAACACAACAACCAACAAAATAAGTAGTAAGGAATTGAGTGCACA
 
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rJMSF052M07-          AGGAATACACCTGCATGCCACCAAACCTCATTTCAGCATGGTGCTGTTTACTAACCCTAC
rJMSF005G12-          AGGAATACACCTGCATGCCACCAAACCTCATTTCANCATGGTGCTGTTTACTAACCCTAC
JMSF052M07+           AGGAATACACCTGCATGCCACCAAACCTCATTTCAGCATGGTGCTGTTTACTAACCCTAC
JMFN018K10+           AGGAATACACCTGCATGCCACCAAACCTCATTTCAGCATGGTGCTGTTTACTAACCCTAC
                      ____________________________________________________________
consensus             AGGAATACACCTGCATGCCACCAAACCTCATTTCAGCATGGTGCTGTTTACTAACCCTAC
 
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rJMSF052M07-          ATACATTCTTGTCATATAATCTATCTCTTCTGTACATTCCTCTATGCTTCATGGCATCAC
rJMSF005G12-          ATACATTCTTGTCATATAATCTATCTCTTCTGNACNTTCCTCTATGCTNCATGGCNTCAC
JMSF052M07+           ATACATTCTTGTCATATAATCTATCTCTTCTGTACATTCCTCTATGCTTCATGGCATCAC
JMFN018K10+           ATACATTCTTGTCATATAATCTATCTCTTCTGTACATTCCTCTATGCTTCATGGCATCAC
                      ____________________________________________________________
consensus             ATACATTCTTGTCATATAATCTATCTCTTCTGTACATTCCTCTATGCTTCATGGCATCAC
 
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rJMSF052M07-          ATAATCAAAGAAAACAAAAAATAAAATAAAATTTGCATACTGACAAGTGAAGATGTTGGA
JMSF052M07+           ATAATCAAAGAAAACAAAAAATAAAATAAAATTTGCATACTGACAAGTGAAGATGTTGGA
JMFN018K10+           ATAATCAAAGAAAACAAAAAATAAAATAAAATTTGCATACTGACAAGTGAAGATGTTGAA
                      ____________________________________________________________
consensus             ATAATCAAAGAAAACAAAAAATAAAATAAAATTTGCATACTGACAAGTGAAGATGTTGGA
 
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rJMSF052M07-          GCTTCTTGATCTTCAAGCTGTGCTTCTCAGGAATGCTTTTTATCTCTGAGAAAGAATGGT
JMSF052M07+           GCTTCTTGATCTTCAAGCTGTGCTTCTCAGGAATGCTTTTTATCTCTGAGAAAGAATGGT
JMFN018K10+           GCTTCTTGATCTTCAAGCTGTGCTTCTCAGGAATGCTTTTTATCTCTGAGAAAGAATGGT
                      ____________________________________________________________
consensus             GCTTCTTGATCTTCAAGCTGTGCTTCTCAGGAATGCTTTTTATCTCTGAGAAAGAATGGT
 
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rJMSF052M07-          CGGTCCAAACACAGAATCAAAGAGAAAGACTCGAGGTAGCCCCCCGGCGAAGTTATAGTC
JMSF052M07+           CGGTCCAAACACAGAATCAAAGAGAAAGACTCGAGGTAGCCCCCCGGCGAAGTTATAGTC
JMFN018K10+           CGGTCCAAACACAGAATCAAAGAGAAAGACTCGAGGTAGCCCCCCGGCGAAGTTATAGTC
                      ____________________________________________________________
consensus             CGGTCCAAACACAGAATCAAAGAGAAAGACTCGAGGTAGCCCCCCGGCGAAGTTATAGTC
 
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rJMSF052M07-          TTAAGCTTTTTGAAGGGCACGGGCAGAAAGACCATGCAGAAGACGAACGAACCCCAAGAA
JMSF052M07+           TTAAGCTTTTTGAAGGGCACGGGCAGAAAGACCATGCAGAAGACGAACGAACCCCAAGAA
JMFN018K10+           TTAAGCTTTTTGAAGGGCACGGGCAGAAAGACCATGCAGAAGACGAACGAACCCCAAGAA
                      ____________________________________________________________
consensus             TTAAGCTTTTTGAAGGGCACGGGCAGAAAGACCATGCAGAAGACGAACGAACCCCAAGAA
 
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rJMSF052M07-          ACTGAGCTTTCCATCC                                            
JMSF052M07+           ACTGAGCTTTCCATCC                                            
JMFN018K10+           ACTGAGCTTTCCATCCGAGTGTCTGATCCAGTCCTGCAGAACTACGTGAACTGGAACCGA
                      ____________________________________________________________
consensus             ACTGAGCTTTCCATCCGAGTGTCTGATCCAGTCCTGCAGAACTACGTGAACTGGAACCGA
 
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JMFN018K10+           AGGGCTCAGGCCGAGCTCCTGTATATATATATATATATATATATATATATATATATAGAA
                      ____________________________________________________________
consensus             AGGGCTCAGGCCGAGCTCCTGTATATATATATATATATATATATATATATATATATAGAA