Contig 007525:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017D02Sequence620007525 (6)ref|XP_011014751.1|2e-51PREDICTED: basic blue protein [Populus euphratica]
JMFN018L24Sequence605007525 (6)ref|XP_011014751.1|2e-51PREDICTED: basic blue protein [Populus euphratica]
JMFN028P22Sequence590007525 (6)ref|XP_011014751.1|2e-51PREDICTED: basic blue protein [Populus euphratica]
JMFS068H09Sequence633007525 (6)ref|XP_011014751.1|6e-51PREDICTED: basic blue protein [Populus euphratica]
JMSF015H11Sequence511007525 (6)ref|XP_011014751.1|6e-52PREDICTED: basic blue protein [Populus euphratica]708007525 (6)ref|XP_011014751.1|6e-51PREDICTED: basic blue protein [Populus euphratica]

Alignment

This contig is upended


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rJMSF015H11-                                                    AAGCACTGGCAAATAAAG
                      ____________________________________________________________
consensus                                                       AAGCACTGGCAAATAAAG
 
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JMFS068H09+                                                   AGTAGANAGTAGAANCCACA
rJMSF015H11-          TACTCAGTATTTTATAAGCACGAACCATATTAAGACTACTAGTAGAAAGTAGAAACCACA
                      ____________________________________________________________
consensus             TACTCAGTATTTTATAAGCACGAACCATATTAAGACTACTAGTAGAAAGTAGAAACCACA
 
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JMFS068H09+           CAGTAGAAATAGCTAAACCAATGGACTTGGCACTAGTTATATATGCATAAGCTTAGACAA
JMFN018L24+                     AGCTAAACCAATGGACTTGGCACTAGTTATATATGCATAAGCTTAGACAA
JMFN028P22+                     AGCTAAACCAATGGACTTGGCACTAGTTATATATGCATAAGCTTAGACAA
rJMSF015H11-          CAGTAGAAATAGCTAAACCAATGGACTTGGCACTAGTTATATATGCATAAGCTTAGACAA
JMFN017D02+                                                   ATATGCATAAGCTTAGACAA
                      ____________________________________________________________
consensus             CAGTAGAAATAGCTAAACCAATGGACTTGGCACTAGTTATATATGCATAAGCTTAGACAA
 
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JMFS068H09+           GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
JMFN018L24+           GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
JMFN028P22+           GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
rJMSF015H11-          GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
JMSF015H11+                                                                      A
JMFN017D02+           GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
                      ____________________________________________________________
consensus             GCCACGCACAGTTCCTTAAATTAGCAACAACGTAATACTGCATTTATTTATGCGTTTTAA
 
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JMFS068H09+           TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
JMFN018L24+           TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
JMFN028P22+           TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
rJMSF015H11-          TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
JMSF015H11+           TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
JMFN017D02+           TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
                      ____________________________________________________________
consensus             TTAACTATATATATCATCATCGCCTTGCGTAAACCATACATATGTGTCCCCGAAAATCAT
 
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JMFS068H09+           GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
JMFN018L24+           GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
JMFN028P22+           GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
rJMSF015H11-          GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
JMSF015H11+           GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
JMFN017D02+           GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
                      ____________________________________________________________
consensus             GGATTTCGTCAAACAGCGGTGATAGCGATCTTCATTCCGGACTCGCAGTGGCCTGGGAAA
 
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JMFS068H09+           CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
JMFN018L24+           CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
JMFN028P22+           CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
rJMSF015H11-          CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
JMSF015H11+           CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
JMFN017D02+           CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
                      ____________________________________________________________
consensus             CTGCAGATGAAGAAATTCTGTCCCTTCACCAGCTTGATCCTGTCTTTCCCGGTCTGATAC
 
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JMFS068H09+           GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
JMFN018L24+           GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
JMFN028P22+           GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
rJMSF015H11-          GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
JMSF015H11+           GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
JMFN017D02+           GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
                      ____________________________________________________________
consensus             GTCTTGGCGCCGCGCGGCGGACGGCAGCTGTTGTAGCCTGCACGGTTCACGGCCACCACG
 
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JMFS068H09+           TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
JMFN018L24+           TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
JMFN028P22+           TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
rJMSF015H11-          TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
JMSF015H11+           TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
JMFN017D02+           TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
                      ____________________________________________________________
consensus             TTGTGGTAGCTGGAGCCGTAGTTGAACGCGAGCACATCGCCGGCTCTGAAGCGTTTTCCT
 
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JMFS068H09+           TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGAGGGTGTAAACGGCG
JMFN018L24+           TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
JMFN028P22+           TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
rJMSF015H11-          TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
JMSF015H11+           TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
JMFN017D02+           TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
                      ____________________________________________________________
consensus             TTGGGCCAGCTGTCGACGTTAAAGGTCCAGCCGCCGGAACCACCGACGGTGTAAACGGCG
 
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JMFS068H09+           GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
JMFN018L24+           GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
JMFN028P22+           GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
rJMSF015H11-          GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
JMSF015H11+           GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
JMFN017D02+           GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
                      ____________________________________________________________
consensus             GCCTGAGCCACCTCGGAGTGAAGCAGAAGCACGCACAGCACAACCGCCGCGCACACCATC
 
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JMFS068H09+           ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
JMFN018L24+           ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
JMFN028P22+           ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCA     
rJMSF015H11-          ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
JMSF015H11+           ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
JMFN017D02+           ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
                      ____________________________________________________________
consensus             ACTGCACTGCCTCTTCCCATCCTATCCTGCTGGGAGCTGAGCTAAGAGAGAACCAGAGAA
 
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JMFS068H09+           AATTATTATGGAA                                               
JMFN018L24+           AATTATTATGGAAAA                                             
rJMSF015H11-          AATTATTATGGAAAACAGATCGAGATGG                                
JMSF015H11+           AATTATTATGGAAAACAGATCGAGATGG                                
JMFN017D02+           AATTATTATGGAAAACAGATCGAGATGGCAGACTGTGTAAGGTGTTAGGAGCATTTATAG
                      ____________________________________________________________
consensus             AATTATTATGGAAAACAGATCGAGATGGCAGACTGTGTAAGGTGTTAGGAGCATTTATAG