| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012M11 | Sequence | 564 | 007524 (11) | ref|XP_006450257.1| | 7e-80 | hypothetical protein CICLE_v10009603mg [Citrus clementina] gb|ESR63497.1| hypoth | 670 | 007524 (11) | gb|KJB55130.1| | 4e-75 | hypothetical protein B456_009G064600 [Gossypium raimondii] |
| JMFF024D12 | Sequence | 516 | 007524 (11) | ref|XP_006357073.1| | 4e-77 | PREDICTED: ER membrane protein complex subunit 4-like [Solanum tuberosum] | 711 | 007524 (11) | gb|KJB55130.1| | 6e-87 | hypothetical protein B456_009G064600 [Gossypium raimondii] |
| JMFF024F02 | Sequence | 522 | 007524 (11) | ref|XP_006450257.1| | 2e-65 | hypothetical protein CICLE_v10009603mg [Citrus clementina] gb|ESR63497.1| hypoth | 611 | 007524 (11) | gb|KJB55130.1| | 4e-76 | hypothetical protein B456_009G064600 [Gossypium raimondii] |
| JMFF044L10 | Sequence | 594 | 007524 (11) | ref|XP_006357073.1| | 2e-95 | PREDICTED: ER membrane protein complex subunit 4-like [Solanum tuberosum] | 558 | 007524 (11) | ref|XP_004291626.1| | 6e-39 | PREDICTED: ER membrane protein complex subunit 4-like [Fragaria vesca subsp. ve |
| JMFN013A02 | Sequence | 622 | 007524 (11) | ref|XP_006357073.1| | 2e-93 | PREDICTED: ER membrane protein complex subunit 4-like [Solanum tuberosum] | |||||
| JMFN016O08 | Sequence | 619 | 007524 (11) | ref|XP_004291626.1| | 2e-41 | PREDICTED: ER membrane protein complex subunit 4-like [Fragaria vesca subsp. ve | |||||
| JMSF033P20 | Sequence | 640 | 015795 | ref|XP_009598253.1| | 4e-106 | PREDICTED: nudix hydrolase 9 isoform X3 [Nicotiana tomentosiformis] | 690 | 007524 (11) | gb|KJB55130.1| | 1e-78 | hypothetical protein B456_009G064600 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMFF012M11- ATCACCACCATTGCTTTACGACGGAGA
JMFF024D12- ATCACCACCATTGCTTTACGACGGAGA
JMFF024F02- ATCACCACCATTGCTTTACGACGGAGA
JMFF044L10- AATTGAGACAAGACGAGATCGACGACATCACCACCATTGCTTTACGACGGAGA
JMFN013A02- CTTTACGACGGAGA
rJMFF024D12+ ATCACCACCATTGCTTTACGACGGAGA
____________________________________________________________
consensus AATTGAGACAAGACGAGATCGACGACATCACCACCATTGCTTTACGACGGAGA
. : . : . : . : . : . :
JMFF012M11- TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCAGATGGNCCGTCGACTTCACCGACA
JMFF024D12- TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCA-ATGGGCCGTCGACTTCACCGACA
JMFF024F02- TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCA-ATGGGCCGTCGACTTCACCGACA
JMFF044L10- TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCAGATGGGCCGTCGACTTCACCGACA
JMFN013A02- TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCATATGGGCCGTCGACTTCACCGACA
rJMFF024D12+ TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCA-ATGGGCCGTCGACTTCACCGACA
rJMSF033P20+ CA
____________________________________________________________
consensus TGGAGAAGGGAAAAGCAGTGATGGGTATGGGCCGCA-ATGGGCCGTCGACTTCACCGACA
. : . : . : . : . : . :
JMFF012M11- ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
JMFF024D12- ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
JMFF024F02- ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
JMFF044L10- ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
JMFN013A02- ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
rJMFF024D12+ ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
rJMFF024F02+ CTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
rJMSF033P20+ ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
rJMFF012M11+ CGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
____________________________________________________________
consensus ATTCAACCTCCCCTTCCTCTCGCGACATCCCCGACCCTCCTGGCTTCACTCGCGCTTCTC
. : . : . : . : . : . :
JMFF012M11- AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAANAACGCCGAATCTAATTGGAAAT
JMFF024D12- AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
JMFF024F02- AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
JMFF044L10- AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
JMFN013A02- AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
rJMFF024D12+ AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
rJMFF024F02+ AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
rJMSF033P20+ AAGATCAGGACGATTTAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
rJMFF012M11+ AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
____________________________________________________________
consensus AAGATCAGGACGATTCAACAGTGAGTCGTGAGAAGAAGAACGCCGAATCTAATTGGAAAT
. : . : . : . : . : . :
JMFF012M11- CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
JMFF024D12- CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
JMFF024F02- CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
JMFF044L10- CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
JMFN013A02- CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
rJMFF024D12+ CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
rJMFF024F02+ CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
rJMSF033P20+ CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
rJMFF012M11+ CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
JMFN016O08+ ATTTGATGATGATGGGCTTTA
____________________________________________________________
consensus CTCAGAAAGCATGGGAAGTGGCACAAGCACCTTTCAAGAATTTGATGATGATGGGCTTTA
. : . : . : . : . : . :
JMFF012M11- TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
JMFF024D12- TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
JMFF024F02- TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
JMFF044L10- TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
JMFN013A02- TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
rJMFF024D12+ TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
rJMFF024F02+ TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
rJMSF033P20+ TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
rJMFF012M11+ TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
rJMFF044L10+ AGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
JMFN016O08+ TGATGTGGATGGCTGNAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
____________________________________________________________
consensus TGATGTGGATGGCTGGAAGCACAGTTCATTTATTTAGCATTGGGATCACATTTTCTGCTC
. : . : . : . : . : . :
JMFF012M11- TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
JMFF024D12- TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
JMFF024F02- TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
JMFF044L10- TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
JMFN013A02- TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
rJMFF024D12+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
rJMFF024F02+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
rJMSF033P20+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
rJMFF012M11+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
rJMFF044L10+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
JMFN016O08+ TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
____________________________________________________________
consensus TTTGGCAGCCCATAAGTGCTCTCCAAGGTGTTGGGAAAGTTTTTGAGCCTTACAAGGATA
. : . : . : . : . : . :
JMFF012M11- GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
JMFF024D12- GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
JMFF024F02- GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
JMFF044L10- GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
JMFN013A02- GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
rJMFF024D12+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
rJMFF024F02+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
rJMSF033P20+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
rJMFF012M11+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
rJMFF044L10+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
JMFN016O08+ GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
____________________________________________________________
consensus GTAAAGTGGATCTCCTGGGGCCAAAATTACTATTCATTGCCTTAAATTTGGCTGGTTTAG
. : . : . : . : . : . :
JMFF012M11- NGATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
JMFF024D12- -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
JMFF024F02- -GATTGGGCATCTGGAAGCTTAATACCTTGGGGTCTTCTTCCAAGTCATCCATCTGACTG
JMFF044L10- -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
JMFN013A02- -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
rJMFF024D12+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
rJMFF024F02+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
rJMSF033P20+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
rJMFF012M11+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
rJMFF044L10+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
JMFN016O08+ -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
____________________________________________________________
consensus -GATTGGGCATCTGGAAGCTTAATACCTT-GGGTCTTCTTCCAAGTCATCCATCTGACTG
. : . : . : . : . : . :
JMFF012M11- GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGA
JMFF024D12- GGTCTCTTCCTT
JMFF024F02- GGTCTCTTCCTTGCCAC
JMFF044L10- GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
JMFN013A02- GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
rJMFF024D12+ GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
rJMFF024F02+ GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
rJMSF033P20+ GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
rJMFF012M11+ GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
rJMFF044L10+ GGTTTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTTTGGTGGGGGTATGCCTCGATA
JMFN016O08+ GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
____________________________________________________________
consensus GGTCTCTTCCTTGCCACCTGCCCAGGAGGTTGAGTATTCTGGTGGGGGTATGCCTCGATA
. : . : . : . : . : . :
JMFF044L10- TTA
JMFN013A02- TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
rJMFF024D12+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
rJMFF024F02+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
rJMSF033P20+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
rJMFF012M11+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
rJMFF044L10+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
JMFN016O08+ TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
____________________________________________________________
consensus TTAAGACTCTGCCAGACAAGTTGCAGGTCAGAGATTTGGTTGTTAGGGCAGAGAATTTGC
. : . : . : . : . : . :
JMFN013A02- AGCCCTTCTC
rJMFF024D12+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
rJMFF024F02+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
rJMSF033P20+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
rJMFF012M11+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
rJMFF044L10+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
JMFN016O08+ AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
____________________________________________________________
consensus AGCCCTTCTCAAGTGACATTATACATTCTCTGGTTGTACTAGTACTCAAGAAAAGAGTTT
. : . : . : . : . : . :
rJMFF024D12+ CATTTTGGAGTGCTTGTATTTGTAGAC
rJMFF024F02+ CATTTTGGAGTGCTTGTATTTGTAGACTC
rJMSF033P20+ CATTTTGGAGTGCTTGTATTTGTAGACTCTTCAATAGTTTTGGGATTTATTTATGGAACT
rJMFF012M11+ CATTTTGGAGTGCTTGTATTTGTAGACTCTTCAATAGTTTTGGGATTTATTTATGGAACT
rJMFF044L10+ CATTTTGGAGTGCTTGTATTTGTAGACTCTTCAATAGTTTTGGGATTTATTTATGGAACT
JMFN016O08+ CATTTTGGAGTGCTTGTATTTGTAGACTCTTCAATAGTTTTGGGATTTATTTATGGAACT
____________________________________________________________
consensus CATTTTGGAGTGCTTGTATTTGTAGACTCTTCAATAGTTTTGGGATTTATTTATGGAACT
. : . : . : . : . : . :
rJMSF033P20+ TTGTTAACGGATTATAAGCTTTACGATCAT
rJMFF012M11+ TTGTTAACGGATTATAAGCTTTACGATCAT
rJMFF044L10+ TTGTTAACGGATTATAAGCTTTACGATCATCATGAAGGTTATAACTTTGATC
JMFN016O08+ TTGTTAACGGATTATAAGCTTTACGATCATCATGAAGGTTATAACTTTGATCAAACTACG
____________________________________________________________
consensus TTGTTAACGGATTATAAGCTTTACGATCATCATGAAGGTTATAACTTTGATCAAACTACG
. : . : . : . : . : . :
JMFN016O08+ AAATCCAAACAATTCTCGTATGTXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
____________________________________________________________
consensus AAATCCAAACAATTCTCGTATGTNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC