Contig 007523:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013H01Sequence615007523 (4)
JMFN016J08Sequence612007523 (4)
JMFN029N03Sequence618007523 (4)
JMFS128C04Sequence452007523 (4)

Alignment

This contig is upended


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JMFS128C04+                       GCGCGTAAATCTTATTATTATTATTATTTCTTTGTAGTCGCACGTGCA
                      ____________________________________________________________
consensus                         GCGCGTAAATCTTATTATTATTATTATTTCTTTGTAGTCGCACGTGCA
 
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JMFS128C04+           AAAATTACAACTATTGGGGATGTTCTTAGGTGTCTAACACAAAATAACAGAACATATTTC
JMFN013H01+                                                           AGAACATATTTC
JMFN029N03+                                                           AGAACATATTTC
JMFN016J08+                                                           AGAACATATTTC
                      ____________________________________________________________
consensus             AAAATTACAACTATTGGGGATGTTCTTAGGTGTCTAACACAAAATAACAGAACATATTTC
 
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JMFS128C04+           CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
JMFN013H01+           CTCCGTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGTTGCAACAAT
JMFN029N03+           CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
JMFN016J08+           CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
                      ____________________________________________________________
consensus             CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
 
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JMFS128C04+           AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
JMFN013H01+           AGCACCTGCACTAACCCTCAAACTCCTTCCCACACTGGAGTCATCTTCAGTTGGGGCAGG
JMFN029N03+           AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
JMFN016J08+           AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
                      ____________________________________________________________
consensus             AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
 
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JMFS128C04+           TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
JMFN013H01+           TGATGCGGCAGGCGTAATAATATTTGGTGGCAGTGGTGGTGACAACATCTTCCTAGGGCT
JMFN029N03+           TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
JMFN016J08+           TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
                      ____________________________________________________________
consensus             TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
 
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JMFS128C04+           AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
JMFN013H01+           AGGTGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGGGGATTAGTGCTCGGGCTAGT
JMFN029N03+           AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
JMFN016J08+           AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
                      ____________________________________________________________
consensus             AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
 
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JMFS128C04+           AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
JMFN013H01+           AGGGGCTCCGCCCTTCGGGCTAGTAGGGGCTGCGCCGTTCGGGCTAGCAGGGGGGGTGCT
JMFN029N03+           AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
JMFN016J08+           AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
                      ____________________________________________________________
consensus             AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
 
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JMFS128C04+           TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGC                  
JMFN013H01+           GGTTGGGGTAGCAGGTGGGGCATTGGTTGGGGTCGGGTTAGCTGGCGGGGCATTGGTCGG
JMFN029N03+           TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
JMFN016J08+           TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
                      ____________________________________________________________
consensus             TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
 
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JMFN013H01+           GCTGGAAGGAGATGGAACTGGAGAAGTTGCAAGAACCGAATTTGTTTTTGCAGAGTTGTG
JMFN029N03+           GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
JMFN016J08+           GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
                      ____________________________________________________________
consensus             GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
 
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JMFN013H01+           ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
JMFN029N03+           ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
JMFN016J08+           ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
                      ____________________________________________________________
consensus             ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
 
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JMFN013H01+           AAGGATGACGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTTGCTTTTA
JMFN029N03+           AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
JMFN016J08+           AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
                      ____________________________________________________________
consensus             AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
 
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JMFN013H01+           TTTTCTGTTGTTTTGTTT                                          
JMFN029N03+           TTTTCTGTTGTTTTGTTTCGG                                       
JMFN016J08+           TTTTCTGTTGTTTTGTTTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXGTTTTTGCTTTTG
                      ____________________________________________________________
consensus             TTTTCTGTTGTTTTGTTTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTGCTTTTG