| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015F02 | Sequence | 566 | 007518 (7) | ref|NP_001281103.1| | 2e-97 | uncharacterized protein LOC100272335 [Zea mays] gb|ACN33388.1| unknown [Zea mays | |||||
| JMFF028G14 | Sequence | 535 | 007518 (7) | ref|XP_009396018.1| | 5e-88 | PREDICTED: 60S ribosomal protein L10a-1-like [Musa acuminata subsp. malaccensis | 728 | 007518 (7) | emb|CDP15411.1| | 2e-86 | unnamed protein product [Coffea canephora] |
| JMFN013G03 | Sequence | 624 | 007518 (7) | ref|XP_003543429.1| | 1e-113 | PREDICTED: 60S ribosomal protein L10a-1 [Glycine max] gb|ACU16844.1| unknown [Gl | |||||
| JMSF012E17 | Sequence | 470 | 007518 (7) | ref|XP_009396018.1| | 4e-74 | PREDICTED: 60S ribosomal protein L10a-1-like [Musa acuminata subsp. malaccensis | 775 | 007518 (7) | ref|XP_009623816.1| | 2e-104 | PREDICTED: 60S ribosomal protein L10a-1-like isoform X1 [Nicotiana tomentosifor |
| JMSF026B05 | Sequence | 669 | 009356 (2) | ref|XP_009618680.1| | 3e-89 | PREDICTED: protein EI24 homolog isoform X1 [Nicotiana tomentosiformis] | 785 | 007518 (7) | ref|XP_009395645.1| | 5e-87 | PREDICTED: 60S ribosomal protein L10a-1-like [Musa acuminata subsp. malaccensis |
This contig is upended
. : . : . : . : . : . :
rJMSF026B05- AAAATATTCTCAAGACATTACTACAGTACGCAAACAAGGAT
____________________________________________________________
consensus AAAATATTCTCAAGACATTACTACAGTACGCAAACAAGGAT
. : . : . : . : . : . :
rJMFF028G14- GTGTGCAGGATTAAGTATGTTGTAGTAAAATGGTATCTAATCCACTCGTCC
rJMSF026B05- TAGATAAAAGTGTGCAGGATTAAGTATGTTGTAGTAAAATGGTATCTAATCCACTCGTCC
rJMSF012E17- GTTGTAGTAAAATGGTATCTAATCCACTCGTCC
____________________________________________________________
consensus TAGATAAAAGTGTGCAGGATTAAGTATGTTGTAGTAAAATGGTATCTAATCCACTCGTCC
. : . : . : . : . : . :
rJMFF028G14- TACACTCTTCAAAAATGAAATCAAAGAGAGACTGATATCAAAAATCTCAACAAATCCAAA
rJMSF026B05- TACACTCTTCAAAAATGAAATCAAAGAGAGACTGATATCAAAAATCTCAACAAATCCAAA
rJMSF012E17- TACACTCTTCAAAAATGAAATCAAAGAGAGACTGATATCAAAAATCTCAACAAATCCAAA
____________________________________________________________
consensus TACACTCTTCAAAAATGAAATCAAAGAGAGACTGATATCAAAAATCTCAACAAATCCAAA
. : . : . : . : . : . :
rJMFF028G14- TACCCAGTGATAAGCCTTGAACAATAACAGGGAAATCCACGAGGACATCGAAACAAAAAT
rJMSF026B05- TACCCAGTGATAAGCCTTGAACAATAACAGGGAAATCCACGAGGACATCGAAACAAAAAT
rJMSF012E17- TACCCAGTGATAAGCCTTGAACAATAACAGGGAAATCCACGAGGACATCGAAACAAAAAT
____________________________________________________________
consensus TACCCAGTGATAAGCCTTGAACAATAACAGGGAAATCCACGAGGACATCGAAACAAAAAT
. : . : . : . : . : . :
rJMFF028G14- GGTTCTAGACAATGGCAGAGTACAAGACTGATTGTGCAATGTCTACCTATAGAGCTTAAA
rJMSF026B05- GGTTCTAGACAATGGCAGAGTACAAGACTGATTGTGCAATGTCTACCTATAGAGCTTAAA
rJMSF012E17- GGTTCTAGACAATGGCAGAGTACAAGACTGATTGTGCAATGTCTACCTATAGAGCTTAAA
____________________________________________________________
consensus GGTTCTAGACAATGGCAGAGTACAAGACTGATTGTGCAATGTCTACCTATAGAGCTTAAA
. : . : . : . : . : . :
rJMFF028G14- TAAAGAATACAAAAGACACAATTCCAAGTTAAAAGACCCGAATAGGCCTTCCCATTGTTG
rJMSF026B05- TAAAGAATACAAAAGACACAATTCCAAGTTAAAAGACCCGAATAGGCCTTCCCATTGTTG
rJMSF012E17- TAAAGAATACAAAAGACACAATTCCAAGTTAAAAGACCCGAATAGGCCTTCCCATTGTTG
____________________________________________________________
consensus TAAAGAATACAAAAGACACAATTCCAAGTTAAAAGACCCGAATAGGCCTTCCCATTGTTG
. : . : . : . : . : . :
rJMFF028G14- TCTTGAGATATAGGCACCTCACATTCTGCCAGTTCTTTTTCAGCAATGATACCAGAAAGT
rJMSF026B05- TCTTGAGATATAGGCACCTCACATTCTGCCAGTTCTTTTTCAGCAATGATACCAGAAAGT
rJMSF012E17- TCTTGAGATATAGGCACCTCACATTCTGCCAGTTCTTTTTCAGCAATGATACCAGAAAGT
JMFN013G03+ TTTTCAGCAATGATACCAGAAAGT
____________________________________________________________
consensus TCTTGAGATATAGGCACCTCACATTCTGCCAGTTCTTTTTCAGCAATGATACCAGAAAGT
. : . : . : . : . : . :
rJMFF028G14- TCACGCTCATTTGAACATTCTGGAAGATCTGCTTTTCCTCCATGGCAACATTACCAACAG
rJMSF026B05- TCACGCTCATTTGAACATTCTGGAAGATCTGCTTTTCCTCCATGGCAACATTACCAACAG
rJMSF012E17- TCACGCTCATTTGAACATTCTGGAAGATCTGCTTTTCCTCCATGGCAACATTACCAACAG
rJMCP015F02+ CATTACCAACAG
JMFN013G03+ TCACGCTCATTTGAACATTCTGGAAGATCTGCTTTTCCTCCATGGCAACATTACCAACAG
____________________________________________________________
consensus TCACGCTCATTTGAACATTCTGGAAGATCTGCTTTTCCTCCATGGCAACATTACCAACAG
. : . : . : . : . : . :
rJMFF028G14- CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
rJMSF026B05- CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
rJMSF012E17- CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
rJMCP015F02+ CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
JMFF028G14+ TAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
JMFN013G03+ CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
____________________________________________________________
consensus CAACACCCATACAGAGGACCTTCTTAAGCTGAAATTTTACAGTAGCCTTTGTTTCATTAA
. : . : . : . : . : . :
rJMFF028G14- CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
rJMSF026B05- CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
rJMSF012E17- CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
rJMCP015F02+ CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
JMSF012E17+ GTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
JMFF028G14+ CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
JMFN013G03+ CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
____________________________________________________________
consensus CCTTCGTCTCCAAGGACTCCTGATGTGTCACCAAGGTTGGGAACTTGCCTGCCTTGTTAA
. : . : . : . : . : . :
rJMFF028G14- GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
rJMSF026B05- GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
rJMSF012E17- GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
rJMCP015F02+ GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
JMSF012E17+ GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
JMFF028G14+ GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
JMFN013G03+ GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
____________________________________________________________
consensus GACCAGGGCCCAAGAGACGAGGGATCTGTTTAATTACAGCTTCAGATGCCAAGAAAGCAT
. : . : . : . : . : . :
rJMFF028G14- GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
rJMSF026B05- GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
rJMSF012E17- GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
rJMCP015F02+ GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
JMSF012E17+ GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
JMFF028G14+ GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
JMFN013G03+ GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
____________________________________________________________
consensus GGTACTTCTTTGCAAGCTTCTTCACCAGCTTCTTGTTTTTGTTGAGCTTCTTTAACCCCT
. : . : . : . : . : . :
rJMFF028G14- CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
rJMSF026B05- CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
rJMSF012E17- CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
rJMCP015F02+ CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
JMSF012E17+ CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
JMFF028G14+ CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
JMFN013G03+ CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
____________________________________________________________
consensus CAACATCCATATACTCCATGCCAATTTTTTCAGCCTCCTCCACATGCTGAGCATCACCAA
. : . : . : . : . : . :
rJMFF028G14- GCATGCATACTTTCATC
rJMSF026B05- GCATGCATACTTTCATCTTAGGGC
rJMSF012E17- GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
rJMCP015F02+ GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
JMSF012E17+ GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
JMFF028G14+ GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
JMFN013G03+ GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
____________________________________________________________
consensus GCATGCATACTTTCATCTTAGGGCGTGGAATGTGAGGCAATTTGACTGAACCACTGAAAC
. : . : . : . : . : . :
rJMSF012E17- GCTTGTCCTTCTGGGGATCATA
rJMCP015F02+ GCTTGTCCTTCTGGGGATCATAGTTCTTCAGCCCAATTTGAAGCTCAATGGTCTCAGTGA
JMSF012E17+ GCTTGTCCTTCTGGGGATCATAGTTCTTCAGCCCAATTTGAAGCTCAATGGTCTCAGTGA
JMFF028G14+ GCTTGTCCTTCTGGGGATCATAGTTCTTCAGCCCAATTTGAAGCTCAATGGTCTCAGTGA
JMFN013G03+ GCTTGTCCTTCTGGGGATCATAGTTCTTCAGCCCAATTTGAAGCTCAATGGTCTCAGTGA
____________________________________________________________
consensus GCTTGTCCTTCTGGGGATCATAGTTCTTCAGCCCAATTTGAAGCTCAATGGTCTCAGTGA
. : . : . : . : . : . :
rJMCP015F02+ ACTTGCGGTTCTTCTCCTTAGAATCCCCCATTAATTGGGAGATTGCTTCCCTCACGGCAT
JMSF012E17+ ACTTGCGGTTCTTCTCCTTAGAATCCCCCATTAATTGGGAGATTGCTTCCCTCACGGCAT
JMFF028G14+ ACTTGCGGTTCTTCTCCTTAGAATCCCCCATTAATTGGGAGATTGCTTCCCTCACGGCAT
JMFN013G03+ ACTTGCGGTTCTTCTCCTTAGAATCCCCCATTAATTGGGAGATTGCTTCCCTCACGGCAT
____________________________________________________________
consensus ACTTGCGGTTCTTCTCCTTAGAATCCCCCATTAATTGGGAGATTGCTTCCCTCACGGCAT
. : . : . : . : . : . :
rJMCP015F02+ CACTTTGCAACTTGCTCATGGCG
JMSF012E17+ CACTTTGCAACTTGCTCATGGCG
JMFF028G14+ CACTTTGCAACTTGCTCATGGCG
JMFN013G03+ CACTTTGCAACTTGCTCATGGCGAAAGATTTTTCTTTCCCTTCAAAATATCTGAATCGGA
____________________________________________________________
consensus CACTTTGCAACTTGCTCATGGCGAAAGATTTTTCTTTCCCTTCAAAATATCTGAATCGGA