Contig 007517:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044C20+                                                     AAAGAGAATTAACACCCT
JMFN012N11+                                             GAAGACAGAAAGAGAATTAACACCCT
                      ____________________________________________________________
consensus                                               GAAGACAGAAAGAGAATTAACACCCT
 
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JMFN044C20+           TTATTTCTTACAATTACTACTGCAACGATCAAGAATTAAAATACCCGTTTCTTAAGTACG
JMFN012N11+           TTATTTCTTACAATTACTACTGCAACGATCAAGAATTAAAATACCCGTTTCTTAAGTACG
                      ____________________________________________________________
consensus             TTATTTCTTACAATTACTACTGCAACGATCAAGAATTAAAATACCCGTTTCTTAAGTACG
 
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JMFN044C20+           AGTATGATTGATCGTCACTTGATATTATTAATTAAATACACATGACAATTAAGTTGGAAC
JMFN012N11+           AGTATGATTGATCGTCACTTGATATTATTAATTAAATACACATGACAATTAAGTTGGAAC
                      ____________________________________________________________
consensus             AGTATGATTGATCGTCACTTGATATTATTAATTAAATACACATGACAATTAAGTTGGAAC
 
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JMFN044C20+           ATCATTAATTGTCGTGCATGGTGAGGCTTAATTAACACCGTACGTAGTACGTCCGACCGC
JMFN012N11+           ATCATTAATTGTCGTGCATGGTGAGGCTTAATTAACACCGTACGTAGTACGTCCGACCGC
                      ____________________________________________________________
consensus             ATCATTAATTGTCGTGCATGGTGAGGCTTAATTAACACCGTACGTAGTACGTCCGACCGC
 
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JMFN044C20+           CGGCCGGTTACTTCAATTCTTTGTTAGATTTACCGTCGTCCGTCATTCTTGACTTGAATC
JMFN012N11+           CGGCCGGTTACTTCAATTCTTTGTTAGATTTACCGTCGTCCGTCATTCTTGACTTGAATC
                      ____________________________________________________________
consensus             CGGCCGGTTACTTCAATTCTTTGTTAGATTTACCGTCGTCCGTCATTCTTGACTTGAATC
 
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JMFN044C20+           TCTATTCCTTCCTTGTATTCTGCACCTTTTCCATCCTCTTCTTTCTTGGAGTCTTTGTAC
JMFN012N11+           TCTATTCCTTCCTTGTATTCTGCACCTTTTCCATCCTCTTCTTTCTTGGAGTCTTTGTAC
JMFN013B20+                                                                     AC
                      ____________________________________________________________
consensus             TCTATTCCTTCCTTGTATTCTGCACCTTTTCCATCCTCTTCTTTCTTGGAGTCTTTGTAC
 
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JMFN044C20+           ATGCAGTACAGAACGATTTGGGCTAGTCCGAACAGGAATCCCAGGATGTTTGGAAATGCA
JMFN012N11+           ATGCAGTACAGAACGATTTGGGCTAGTCCGAACAGGAATCCCAGGATGTTTGGAAATGCA
JMFN013B20+           ATGCAGTACAGAACGATTT-GGCTAGTCCGAACAGGAATCCCAGGATG-TTGGAAATGCA
                      ____________________________________________________________
consensus             ATGCAGTACAGAACGATTTGGGCTAGTCCGAACAGGAATCCCAGGATGTTTGGAAATGCA
 
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JMFN044C20+           ATGTAATAATCCTTGGAGAAAAGTCCGTAGAAAAACCAAGCTGTAGCGCAGAATACAAGG
JMFN012N11+           ATGTAATAATCCTTGGAGAAAAGTCCGTAGAAAAACCAAGCTGTAGCGCAGAATACAAGG
JMFN013B20+           ATGTAATAATCCTTGGAGAAAAGTCCGTAGAAAAACCAAGCTGTAGCGCAGAATACAAGG
                      ____________________________________________________________
consensus             ATGTAATAATCCTTGGAGAAAAGTCCGTAGAAAAACCAAGCTGTAGCGCAGAATACAAGG
 
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JMFN044C20+           CAGACGGAGAGAGTGAGCGGCATGAACTGCGTGTTC                        
JMFN012N11+           CAGACGGAGAGAGTGAGCGGCATGAACTGCGTGTTCCTTGTTCTTATCACTTGTCTCATG
JMFN013B20+           CAGACGGAGAGAGTGAGCGGCATGAACTGCGTGTTCCTTGTTCTTATCACTTGTCTCATG
                      ____________________________________________________________
consensus             CAGACGGAGAGAGTGAGCGGCATGAACTGCGTGTTCCTTGTTCTTATCACTTGTCTCATG
 
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JMFN012N11+           ATGCTCAAGGGGGCAGCGAAGACGGCAACGTTAATAACGGCACATGTCCATCCCACAAGG
JMFN013B20+           ATGCTCAAGGGGGCAGCGAAGACGGCAACGTTAATAACGGCACATGTCCATCCCACAAGG
                      ____________________________________________________________
consensus             ATGCTCAAGGGGGCAGCGAAGACGGCAACGTTAATAACGGCACATGTCCATCCCACAAGG
 
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JMFN012N11+           GCAATTCTTTTTGACCCGTTTACCAGAAACAAAGAGACTATAATCACCGCCCCG      
JMFN013B20+           GCAATTCTTTTTGACCCGTTTACCAGAAACAAAGAGACTATAATCACCGCCCCGAAAAAC
                      ____________________________________________________________
consensus             GCAATTCTTTTTGACCCGTTTACCAGAAACAAAGAGACTATAATCACCGCCCCGAAAAAC
 
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JMFN013B20+           AAAATGTCCAGCAACAGTAGCTTTATAGTAAAGATCTTATCTTTTTTGTTGGCATAAAAC
                      ____________________________________________________________
consensus             AAAATGTCCAGCAACAGTAGCTTTATAGTAAAGATCTTATCTTTTTTGTTGGCATAAAAC
 
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JMFN013B20+           AAGTACATTGAGATAAAAACCAATTCAATGGCACAACCAAAGCCATTGATGCAGACGATT
                      ____________________________________________________________
consensus             AAGTACATTGAGATAAAAACCAATTCAATGGCACAACCAAAGCCATTGATGCAGACGATT
 
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JMFN013B20+           AGATATGCGTTGGTCTTGATAACAGCATAGTACAACAGCAATTCTGCACTGAAAAGTGCA
                      ____________________________________________________________
consensus             AGATATGCGTTGGTCTTGATAACAGCATAGTACAACAGCAATTCTGCACTGAAAAGTGCA
 
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JMFN013B20+           ACAACGTATGGTATGGATTGGTACCCATCAGATGATTTCCTTTTGTAAATCTTGTAGAAG
                      ____________________________________________________________
consensus             ACAACGTATGGTATGGATTGGTACCCATCAGATGATTTCCTTTTGTAAATCTTGTAGAAG
 
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JMFN013B20+           GTTGGTATCGGTGCTAGGAAAACAAAAAATGACACAATGTTACCGAGGAGACCAAAGAGG
                      ____________________________________________________________
consensus             GTTGGTATCGGTGCTAGGAAAACAAAAAATGACACAATGTTACCGAGGAGACCAAAGAGG
 
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JMFN013B20+           AGGGCCAAGTGTTGAACACTTAGCAGTGCCATTTTAACCTTTCTTGCAGGTGAAGCTCTT
                      ____________________________________________________________
consensus             AGGGCCAAGTGTTGAACACTTAGCAGTGCCATTTTAACCTTTCTTGCAGGTGAAGCTCTT