Contig 007516:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012N04Sequence624007516 (2)ref|XP_006347222.1|2e-77PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Solanum tuberosum]
JMSF012K21Sequence183007516 (2)emb|CDP06989.1|4e-31unnamed protein product [Coffea canephora]704004418 (2)ref|XP_009632033.1|3e-75PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 [Ni

Alignment

This contig is upended


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JMFN012N04- GTGATCTACAGCTTCTTCTTCGTT
                      ____________________________________________________________
consensus GTGATCTACAGCTTCTTCTTCGTT
 
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JMFN012N04- AGGAAAATCATAGCTCACATGGTCACGTTCTTCTTCTACTGTGTCGTTCTTCCCTTGACC
                      ____________________________________________________________
consensus AGGAAAATCATAGCTCACATGGTCACGTTCTTCTTCTACTGTGTCGTTCTTCCCTTGACC
 
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JMSF012K21+ GAAGTTGAAGTCCCAAAGTGGGGAGCCATCTACATTCCTTGCATCATC
JMFN012N04- ATTTTGGTGCCCGAAGTCGAAGTCCCAAAGTGGGGAGCAATTTACATTCCATGCATCATC
                      ____________________________________________________________
consensus ATTTTGGTGCCCGAAGTTGAAGTCCCAAAGTGGGGAGCCATTTACATTCCTTGCATCATC
 
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JMSF012K21+ ACAGCCCTCAACTCGGTTGGCACCCCGAGGTCAATCCATTTGCTGTTNTACTGGATCCTG
JMFN012N04- ACCACTCTCAACTCTGTTGGCACACCCAGGTCGATTCATTTGTTATTTTACTGGATTCTG
                      ____________________________________________________________
consensus ACCGCTCTCAACTCTGTTGGCACCCCGAGGTCGATTCATTTGTTGTTTTACTGGATTCTG
 
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JMSF012K21+ TTTGAGAATGTGATGTCCTTCCACCGAACCAAGGC
JMFN012N04- TTCGAGAATGTGATGTCCTTCCACCGAACCAAGGCCACCTTCATCGGGCTGCTTGAATTC
                      ____________________________________________________________
consensus TTTGAGAATGTGATGTCCTTCCACCGAACCAAGGCCACCTTCATCGGGCTGCTTGAATTC
 
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JMFN012N04- AGAAGAGCCAACGAGTGGGTTGTCACCGAAAAACTGGGAGATGCTCTCAAGAACAAATCA
                      ____________________________________________________________
consensus AGAAGAGCCAACGAGTGGGTTGTCACCGAAAAACTGGGAGATGCTCTCAAGAACAAATCA
 
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JMFN012N04- ACCGCCAAACCCGTAGCCAGGAAGACAAAGTCATTCTTCGGAGACAGGTAAACCATCCGC
                      ____________________________________________________________
consensus ACCGCCAAACCCGTAGCCAGGAAGACAAAGTCATTCTTCGGAGACAGGTAAACCATCCGC
 
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JMFN012N04- CTTAAACCCTCACAACATATCATATGAGATTCCTTGCTTGCTTTTCCCTGGATGCCCATC
                      ____________________________________________________________
consensus CTTAAACCCTCACAACATATCATATGAGATTCCTTGCTTGCTTTTCCCTGGATGCCCATC
 
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JMFN012N04- CAACATCCTAGTTACACTTACTATGTCTTAGGATCCTGCCACAAGAGTTGGGGTTCGCCG
                      ____________________________________________________________
consensus CAACATCCTAGTTACACTTACTATGTCTTAGGATCCTGCCACAAGAGTTGGGGTTCGCCG
 
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JMFN012N04- TCTTCCTCTTCTTCTGCGGCTGCTACGATTTCCTGTACGGGAAGAACCAGTACTTCATAT
                      ____________________________________________________________
consensus TCTTCCTCTTCTTCTGCGGCTGCTACGATTTCCTGTACGGGAAGAACCAGTACTTCATAT
 
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JMFN012N04- ACCTCTTCCTGCAAGTCATAACCTTCACCATTGCCGGATTTGGCTACATCGGCACCATAG
                      ____________________________________________________________
consensus ACCTCTTCCTGCAAGTCATAACCTTCACCATTGCCGGATTTGGCTACATCGGCACCATAG