clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF001N06 | Sequence | 452 | 011854 (11) | ref|XP_006342632.1| | 8e-46 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] | 659 | 007515 (8) | ref|XP_009604890.1| | 4e-59 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] |
JMFF003C19 | Sequence | 661 | 007515 (8) | ref|XP_009604890.1| | 8e-60 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] | |||||
JMFF009B10 | Sequence | 160 | 007515 (8) | ||||||||
JMFF012M19 | Sequence | 439 | 011854 (11) | ref|XP_006342632.1| | 9e-44 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] | 733 | 007515 (8) | ref|XP_009604890.1| | 1e-69 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] |
JMFN012K01 | Sequence | 569 | 007515 (8) | ref|XP_004252763.1| | 6e-39 | PREDICTED: subtilisin-like protease [Solanum lycopersicum] | |||||
JMSF005B18 | Sequence | 239 | 000411 (4) | 420 | 007515 (8) | ref|XP_004252763.1| | 1e-22 | PREDICTED: subtilisin-like protease [Solanum lycopersicum] | |||
JMSF026A11 | Sequence | 660 | 011854 (11) | ref|XP_011069659.1| | 2e-83 | PREDICTED: subtilisin-like protease [Sesamum indicum] | 802 | 007515 (8) | ref|XP_009604890.1| | 1e-77 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] |
JMSF040K03 | Sequence | 690 | 011854 (11) | ref|XP_011069659.1| | 5e-101 | PREDICTED: subtilisin-like protease [Sesamum indicum] | 870 | 007515 (8) | ref|XP_009604890.1| | 4e-98 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF040K03+ TATCCGGGACATCNAT
____________________________________________________________
consensus TATCCGGGACATCNAT
. : . : . : . : . : . :
rJMSF040K03+ GGCGTGCCCGCACGCCACNGGAGTCGCCGCGCTTCTAAAAGCGGCGCACCCGGACTGGAG
____________________________________________________________
consensus GGCGTGCCCGCACGCCACNGGAGTCGCCGCGCTTCTAAAAGCGGCGCACCCGGACTGGAG
. : . : . : . : . : . :
rJMSF040K03+ CCCGGCGGCCATCCGGTCCGCCATGATGACAACCGCCGACGCCACGGACAACACCGCCGC
rJMSF026A11+ GTCCGCCATGATGACAACCGCNGACGCCACGGACAACACCGCCGC
____________________________________________________________
consensus CCCGGCGGCCATCCGGTCCGCCATGATGACAACCGCCGACGCCACGGACAACACCGCCGC
. : . : . : . : . : . :
rJMSF040K03+ CCCGATTCTAGACATCGGTTTCGACAATGCCGCCGCCTCTCCTCTGGCCATGGGAGCCGG
rJMSF026A11+ CCCGATTCAAGACATCGGTTTCGACAATGCCGCCGCCTCTCCTCTGGCCATGGGAGCCGG
rJMFF012M19+ TGGCCATGGGAGCCGG
____________________________________________________________
consensus CCCGATTCTAGACATCGGTTTCGACAATGCCGCCGCCTCTCCTCTGGCCATGGGAGCCGG
. : . : . : . : . : . :
rJMSF040K03+ CCATATCAATCCAAACAGGGCGCTCGACCCCGGCCTCATATACGATGTGAGCTCACAAGA
rJMFF003C19+ CTCGACCCCGGCCTCATATANGATGTGAGCTCACAAGA
rJMFF001N06+ CCCGGCNTCATATACGATGTGAGCTCACAAGA
rJMSF026A11+ CCATATCAATCCAAACAGGGCGCTCGACCCCGGCCTCATATACGATGTGAGCTCACAAGA
rJMFF012M19+ CCATATCAATCCAAACAGGGCGCTCGACCCCGGCCTCATATACGATGTGAGCTCACAAGA
____________________________________________________________
consensus CCATATCAATCCAAACAGGGCGCTCGACCCCGGCCTCATATACGATGTGAGCTCACAAGA
. : . : . : . : . : . :
rJMSF040K03+ TTACATCAACCTTATATGCGCTCTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
rJMFF003C19+ TTACATCAACCTTATATGCGCTGTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
rJMFF001N06+ TTACATCAACCTTATATGCGCTCTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
rJMSF026A11+ TTACATCAACCTTATATGCGCTCTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
rJMFF012M19+ TTACATCAACCTTATATGCGCTCTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
____________________________________________________________
consensus TTACATCAACCTTATATGCGCTCTGAAATTCACGCCAAATCATACCCAGACCATCATAAG
. : . : . : . : . : . :
rJMSF040K03+ AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
rJMFF003C19+ AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
rJMFF001N06+ AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
rJMSF026A11+ AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
rJMFF012M19+ AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
JMFN012K01- TTGGACCTCAACTACCCATCATTCATCGC
____________________________________________________________
consensus AACATCATCGTACAACTGCTCAAACCCGTCATTGGACCTCAACTACCCATCATTCATCGC
. : . : . : . : . : . :
rJMSF040K03+ CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
rJMFF003C19+ CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
rJMFF001N06+ CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
rJMSF026A11+ CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
rJMFF012M19+ CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
JMFN012K01- CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
____________________________________________________________
consensus CTTCTTCCCCGCTAACGCCACCCTGTCTGATCCCAACAGAGTCCAAGAATTCCACCGGAC
. : . : . : . : . : . :
rJMSF040K03+ ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
rJMFF003C19+ ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
rJMSF005B18+ TCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
rJMFF001N06+ ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
rJMSF026A11+ ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
rJMFF012M19+ ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
JMFN012K01- ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
____________________________________________________________
consensus ACTTACTAATCTCGGAGATGGGATATCTACCTATTCTGCAAAGCTGACGCCAATCGGCAA
. : . : . : . : . : . :
rJMSF040K03+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
rJMFF003C19+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
rJMSF005B18+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
rJMFF001N06+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
rJMSF026A11+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
rJMFF012M19+ CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
JMFN012K01- CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
____________________________________________________________
consensus CGTTAACGTAACCGTTGTGCCTGACAAACTGGTTTTCACCAAAAAGTCCGACAAGCAAAG
. : . : . : . : . : . :
rJMSF040K03+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
rJMFF003C19+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
rJMSF005B18+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
rJMFF001N06+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
rJMSF026A11+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
rJMFF012M19+ CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
JMFN012K01- CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
____________________________________________________________
consensus CTACAAGTTAAGGATTGAAGCTCCATCAACAATGGGTGATTTCTTGGTTTTTGGGTCTCT
. : . : . : . : . : . :
rJMSF040K03+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
rJMFF003C19+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
rJMSF005B18+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
rJMFF001N06+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
rJMSF026A11+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
rJMFF012M19+ CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
JMFN012K01- CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
____________________________________________________________
consensus CACCTGGGTGGAGAATGCAGGTAAACATGTCGTCAGAAGTCCCATTGTGGCCACAACCTT
. : . : . : . : . : . :
rJMSF040K03+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
rJMFF003C19+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
rJMSF005B18+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
rJMFF009B10+ CGATTAAACAANATTTGACTACTGTTCATTTACACAGTAACTAGTACTNTC
rJMFF001N06+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
rJMSF026A11+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
rJMFF012M19+ AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
JMFN012K01- AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
____________________________________________________________
consensus AACGTTGGACGATTAAACAACATTTGACTACTCTTCATTTACACAGTAACTAGTACTCTC
. : . : . : . : . : . :
rJMSF040K03+ ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMFF003C19+ ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMSF005B18+ ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMFF009B10+ ANTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMFF001N06+ ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMSF026A11+ ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
rJMFF012M19+ ATTAATAATAATGTTTGTTTTCTGTCATTTG-TTTTTTCTTAACATTTTCCTTAATTAGG
JMFN012K01- ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
____________________________________________________________
consensus ATTAATAATAATGTTTGTTTTCTGTCATTTGTTTTTTTCTTAACATTTTCCTTAATTAGG
. : . : . : . : . : . :
rJMSF040K03+ TTAACTCTTTTCCTTGTTTCAA
rJMFF003C19+ TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
rJMSF005B18+ TTAACTCTTTTCCTTGTTNCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
rJMFF009B10+ TTAACTCT
rJMFF001N06+ TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
rJMSF026A11+ TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
rJMFF012M19+ TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
JMFN012K01- TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
____________________________________________________________
consensus TTAACTCTTTTCCTTGTTTCAAGCAAGGTAAGCAATAGAGATAACTTCAAAAGGAAACAT
. : . : . : . : . : . :
rJMFF003C19+ ATTTCCGTTACTTGTATTGTTTA
rJMSF005B18+ ATNTCCGTTAC
rJMFF001N06+ ATTTCCGTTACT
rJMSF026A11+ ATTTCCGTTACTTGTATTGTTTAA
rJMFF012M19+ ATTTCCGTTACTTGTATTGTTTAACATGTATGTGCATTAATGTAATAAAAAAAAAA
JMFN012K01- ATTTCCGTTACTTGTATTGTTTAACATGTATGTGCATTAATGTAATAAATAAAAAAATTG
____________________________________________________________
consensus ATTTCCGTTACTTGTATTGTTTAACATGTATGTGCATTAATGTAATAAATAAAAAAATTG