clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF010O17 | Sequence | 148 | 008829 (11) | 741 | 007513 (12) | emb|CDP00228.1| | 2e-106 | unnamed protein product [Coffea canephora] | |||
JMFF026O21 | Sequence | 506 | 008829 (11) | ref|XP_006357209.1| | 191 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 732 | 007513 (12) | emb|CDP00228.1| | 9e-94 | unnamed protein product [Coffea canephora] |
JMFF033L08 | Sequence | 464 | 008829 (11) | ref|XP_006357209.1| | 212 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 764 | 007513 (12) | emb|CDP00228.1| | 9e-84 | unnamed protein product [Coffea canephora] |
JMFF034A19 | Sequence | 520 | 008829 (11) | ref|XP_006357209.1| | 182 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 697 | 007513 (12) | emb|CDP00228.1| | 4e-139 | unnamed protein product [Coffea canephora] |
JMFF035I22 | Sequence | 583 | 008829 (11) | ref|XP_006357209.1| | 186 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 749 | 007513 (12) | emb|CDP00228.1| | 2e-105 | unnamed protein product [Coffea canephora] |
JMFF040A10 | Sequence | 530 | 008829 (11) | gb|KJB61188.1| | 2e-42 | hypothetical protein B456_009G345200 [Gossypium raimondii] | 749 | 007513 (12) | emb|CDP00228.1| | 3e-81 | unnamed protein product [Coffea canephora] |
JMFF040K22 | Sequence | 562 | 008829 (11) | ref|XP_006357209.1| | 273 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 751 | 007513 (12) | emb|CDP00228.1| | 2e-82 | unnamed protein product [Coffea canephora] |
JMFF045B12 | Sequence | 483 | 008829 (11) | ref|XP_006357209.1| | 177 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 578 | 007513 (12) | emb|CDP00228.1| | 5e-66 | unnamed protein product [Coffea canephora] |
JMFN010B04 | Sequence | 519 | 007513 (12) | emb|CDP00228.1| | 2e-46 | unnamed protein product [Coffea canephora] | |||||
JMSF010I11 | Sequence | 373 | 008829 (11) | gb|KJB61189.1| | 2e-18 | hypothetical protein B456_009G345200 [Gossypium raimondii] | 803 | 007513 (12) | emb|CDP00228.1| | 4e-107 | unnamed protein product [Coffea canephora] |
JMSF018B13 | Sequence | 514 | 008829 (11) | ref|XP_006357209.1| | 193 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 802 | 007513 (12) | emb|CDP00228.1| | 1e-95 | unnamed protein product [Coffea canephora] |
JMSF027B10 | Sequence | 403 | 024191 | 723 | 007513 (12) | emb|CDP00228.1| | 2e-106 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF034A19+ CCCGAAGTGC
____________________________________________________________
consensus CCCGAAGTGC
. : . : . : . : . : . :
rJMFF034A19+ GGGCTAGATTTAATTCTACTGCAGCATGGGAATATGTTCGAGGAATGTTGGGGAAACCAT
rJMSF010I11+ GGGAANCCAT
rJMSF018B13+ GGGAAACCAT
____________________________________________________________
consensus GGGCTAGATTTAATTCTACTGCAGCATGGGAATATGTTCGAGGAATGTTGGGGAAACCAT
. : . : . : . : . : . :
rJMFF034A19+ ATGGTTACCATAATATGATTTTTAGTTGGATTGACACGATATCTGATAACTATCCT-CCC
rJMSF010I11+ ATGGTTACCATAATATGATTTTTAGTNGGATTGACACGATATCTGATAACTATCCTCCCC
rJMSF018B13+ ATGGTTACCATAATATGA-TTTTAGTTGGATTGACACGATATCTGATAACTATCCT-CCC
rJMFF033L08+ CCC
____________________________________________________________
consensus ATGGTTACCATAATATGATTTTTAGTTGGATTGACACGATATCTGATAACTATCCT-CCC
. : . : . : . : . : . :
rJMFF034A19+ CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMSF010I11+ CCCGTTGATGCTCACTTGGTGATTTCTGTCANGTCTATGTGGACGAGAATGCAGCCAAC-
rJMSF018B13+ CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMFF040A10+ GGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAACT
rJMFF040K22+ TTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMFF026O21+ CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMFF010O17+ CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMFF033L08+ CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMSF027B10+ GATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
rJMFF035I22+ GATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
____________________________________________________________
consensus CCCGTTGATGCTCACTTGGTGATTTCTGTCATGTCTATGTGGACGAGAATGCAGCCAAC-
. : . : . : . : . : . :
rJMFF034A19+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMSF010I11+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMSF018B13+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMFF040A10+ TTATGCTGCAAAATATGTGGAATGAAGCATTGAACAAGAGGGCTCGGCACAGAGGGGCCT
rJMFF040K22+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGAGGGGCCT
rJMFF026O21+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMFF010O17+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMFF033L08+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMSF027B10+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
rJMFF035I22+ TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
____________________________________________________________
consensus TTATGCTGC-AAATATGTGGAATGAAGCATTGAACAAGA-GGCTCGGCACAGA-GGGCCT
. : . : . : . : . : . :
rJMFF034A19+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMSF010I11+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMSF018B13+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF040A10+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF040K22+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF026O21+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF010O17+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF033L08+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGACGGCGGGTTAACCTTCGACCAATTGC
rJMSF027B10+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
rJMFF035I22+ AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
____________________________________________________________
consensus AGATTTATATGAAATTCTTGCTGAGACCGAAAGAC-GCGGGTTAACCTTCGACCAATTGC
. : . : . : . : . : . :
rJMFF034A19+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMSF010I11+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMSF018B13+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF040A10+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF040K22+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF026O21+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF010O17+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF033L08+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF045B12+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMSF027B10+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
rJMFF035I22+ TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
____________________________________________________________
consensus TTACCATTCCAGAACAGGATGAATGGGTGTATAGTGATGGGAAATCAACAACCTGTGTTG
. : . : . : . : . : . :
rJMFF034A19+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMSF010I11+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMSF018B13+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF040A10+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF040K22+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF026O21+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF010O17+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF033L08+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF045B12+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMSF027B10+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
rJMFF035I22+ CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
JMFN010B04- AGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
____________________________________________________________
consensus CCTTTATTCTGGCAATGTATAAGGAATCTGGAGTCTTTGGTTCTCTAGCTGAATCCATTC
. : . : . : . : . : . :
rJMFF034A19+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMSF010I11+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMSF018B13+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF040A10+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF040K22+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF026O21+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF010O17+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF033L08+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF045B12+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMSF027B10+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
rJMFF035I22+ AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
JMFN010B04- AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
____________________________________________________________
consensus AAGTAACCGAGTTCACTATTAGAGATGCCTACATGCTCAAAATTTACGAGAATAACCAGA
. : . : . : . : . : . :
rJMFF034A19+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMSF010I11+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMSF018B13+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF040A10+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF040K22+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF026O21+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF010O17+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF033L08+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF045B12+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMSF027B10+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
rJMFF035I22+ CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
JMFN010B04- CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
____________________________________________________________
consensus CACGCCTTCCGAGCTGGTGTAACAGCGGGAACGACAAGCTCCCCTTCTGCCAGATCGTTG
. : . : . : . : . : . :
rJMFF034A19+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMSF010I11+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMSF018B13+ GCGAGTATCGGATGGAACT-CCATGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF040A10+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF040K22+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF026O21+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACA--AATG
rJMFF010O17+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF033L08+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF045B12+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATGGGAGCCATATGCCAACATGAATG
rJMSF027B10+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
rJMFF035I22+ GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
JMFN010B04- GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
____________________________________________________________
consensus GCGAGTATCGGATGGAACTCCCAGGGTACAACACATTGGAGCCATATGCCAACATGAATG
. : . : . : . : . : . :
rJMFF034A19+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMSF010I11+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMSF018B13+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF040A10+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF040K22+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF026O21+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF010O17+ AGAATTGCCCTTCTTTACCCCCAAGCTATGGGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF033L08+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF045B12+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMSF027B10+ AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
rJMFF035I22+ GGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
JMFN010B04- AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
____________________________________________________________
consensus AGAATTGCCCTTCTTTACCCCCAAGCTATGAGAGGCCTATCCATTGCTAAATGTAATAAT
. : . : . : . : . : . :
rJMFF034A19+ GTATGTTTGTAAAAGACTACGTTAGACAACCTA
rJMSF010I11+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMSF018B13+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF040A10+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF040K22+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF026O21+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF010O17+ GTATGTTTGTAGAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF033L08+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF045B12+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMSF027B10+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
rJMFF035I22+ GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
JMFN010B04- GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
____________________________________________________________
consensus GTATGTTTGTAAAAGACTACGTTAGACAACCTATGTATGTGAGGCTTTCATCTTGGACCA
. : . : . : . : . : . :
rJMSF010I11+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTAC--ATGTAGTGT
rJMSF018B13+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF040A10+ GGTTTCCCTCTTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF040K22+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF026O21+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF010O17+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF033L08+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF045B12+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMSF027B10+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
rJMFF035I22+ GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
JMFN010B04- GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
____________________________________________________________
consensus GGTTTCCCTCGTTTGATTTCATGCTAATCCGTAATTTCAATCTATGTACATATGTAGTGT
. : . : . : . : . : . :
rJMSF010I11+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATT
rJMSF018B13+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATT
rJMFF040A10+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF040K22+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF026O21+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF010O17+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF033L08+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF045B12+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACA
rJMSF027B10+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
rJMFF035I22+ GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
JMFN010B04- GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
____________________________________________________________
consensus GTAATATACAATGTATGTATTATCAACAGCTTATGGCAAATTGTTCTATTTGTAAGACAG
. : . : . : . : . : . :
rJMFF040A10+ ATGGTGAATGCTGTTGGTCTTATAAATAAA
rJMFF040K22+ ATGGTGAATGCTGTTGGTCTTATAAATAAATGGATAGAC
rJMFF026O21+ ATGGTGAATGCTGTTGGTC
rJMFF010O17+ ATGGTGAATGCTGTTGGTCTTATAAA
rJMFF033L08+ ATGGTGAATGCTGTTGGTCTTATAAATAAATGGATAGAC
rJMSF027B10+ ATGGTGAATGCTGT
rJMFF035I22+ ATGGTGAATGCTGTTGGTCTTATAAATAAATGGATAGAC
JMFN010B04- ATGGTGAATGCTGTTGGTCTTATAAATAAATGGATAGACCCTTGCAATTTGTGAGTGTGT
____________________________________________________________
consensus ATGGTGAATGCTGTTGGTCTTATAAATAAATGGATAGACCCTTGCAATTTGTGAGTGTGT