Contig 007512:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009M09Sequence625007512 (2)ref|XP_009793527.1|6e-126PREDICTED: stem-specific protein TSJT1 [Nicotiana sylvestris]
JMFN033J12Sequence628007512 (2)ref|XP_009793527.1|9e-127PREDICTED: stem-specific protein TSJT1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN033J12+ ATCAGCCCAGTTAGCTTCACTTCCAACT
JMFN009M09+ AGCCCAGTTAGCTTCACTTCCAACT
                      ____________________________________________________________
consensus ATCAGCCCAGTTAGCTTCACTTCCAACT
 
. : . : . : . : . : . :
JMFN033J12+ CGAGGGATGCTGTTAACCCTTGAATACAGATCCACTTTGAAGTTAGCGCCGCATATTACA
JMFN009M09+ CGAGGGATGCTGTTAACCCTTGAATACAGATCCACTTTGAAGTTAGCGCCGCATATTACA
                      ____________________________________________________________
consensus CGAGGGATGCTGTTAACCCTTGAATACAGATCCACTTTGAAGTTAGCGCCGCATATTACA
 
. : . : . : . : . : . :
JMFN033J12+ CCTTCACTATCAACCCTCGGCATAGCTCTCATCTTCTTCATTGGATGCTCGAAGCTCATT
JMFN009M09+ CCTTCACTATCAACCCTCGGCATAGCTCTCATCTTCTTCATTGGATGCTCGAAGCTCATT
                      ____________________________________________________________
consensus CCTTCACTATCAACCCTCGGCATAGCTCTCATCTTCTTCATTGGATGCTCGAAGCTCATT
 
. : . : . : . : . : . :
JMFN033J12+ AGCCCTTTTTCACTGTGGAACATGCACCCTGCAGGGAAGGCTGCAAATGACTTGGCGCAG
JMFN009M09+ AGCCCTTTTTCACTGTGGAACATGCACCCTGCAGGGAAGGCTGCAAATGACTTGGCGCAG
                      ____________________________________________________________
consensus AGCCCTTTTTCACTGTGGAACATGCACCCTGCAGGGAAGGCTGCAAATGACTTGGCGCAG
 
. : . : . : . : . : . :
JMFN033J12+ CCTGCTTTGATGACCTCTATATCATCACAAATCACCACCGATCCATCTGCGCCAATTCCC
JMFN009M09+ CCTGCTTTGATGACCTCTATATCATCACAAATCACCACCGATCCATCTGCGCCAATTCCC
                      ____________________________________________________________
consensus CCTGCTTTGATGACCTCTATATCATCACAAATCACCACCGATCCATCTGCGCCAATTCCC
 
. : . : . : . : . : . :
JMFN033J12+ CAATACAGCTTCACCCCGCCGTCACAACCCAGGGCGACAAACACGGTTCCTGTCTTGCTG
JMFN009M09+ CAATACAGCTTCACCCCGCCGTCACAACCCAGGGCGACAAACACGGTTCCTGTCTTGCTG
                      ____________________________________________________________
consensus CAATACAGCTTCACCCCGCCGTCACAACCCAGGGCGACAAACACGGTTCCTGTCTTGCTG
 
. : . : . : . : . : . :
JMFN033J12+ TCATAAATGACAAACGCAAAACTTCCTTCAAGATCCTTCACAACTTGATCAGCCGGATAT
JMFN009M09+ TCATAAATGACAAACGCAAAACTTCCTTCAAGATCCTTCACAACTTGATCAGCCGGATAT
                      ____________________________________________________________
consensus TCATAAATGACAAACGCAAAACTTCCTTCAAGATCCTTCACAACTTGATCAGCCGGATAT
 
. : . : . : . : . : . :
JMFN033J12+ GGACCACGGTCGCGAAGTGTCCTGTAGGCCTCAATAACTAGCATGGCCTCGTTGCTGGTT
JMFN009M09+ GGACCACGGTCGCGAAGTGTCCTGTAGGCCTCAATAACTAGCATGGCCTCGTTGCTGGTT
                      ____________________________________________________________
consensus GGACCACGGTCGCGAAGTGTCCTGTAGGCCTCAATAACTAGCATGGCCTCGTTGCTGGTT
 
. : . : . : . : . : . :
JMFN033J12+ TTCGACAGCCCGTACTGCTTTATTTGGGAACACAGGTTGTTCAGGCTCCCCAAAAACAGG
JMFN009M09+ TTCGACAGCCCGTACTGCTTTATTTGGGAACACAGGTTGTTCAGGCTCCCCAAAAACAGG
                      ____________________________________________________________
consensus TTCGACAGCCCGTACTGCTTTATTTGGGAACACAGGTTGTTCAGGCTCCCCAAAAACAGG
 
. : . : . : . : . : . :
JMFN033J12+ CAGTATATGTCATCGTACCCACAAAACATCCTTGGGGTTTGGTGGAAGAAAGAAGAGGCG
JMFN009M09+ CAGTATATGTCATCGTACCCACAAAACATCCTTGGGGTTTGGTGGAAGAAAGAAGAGGCG
                      ____________________________________________________________
consensus CAGTATATGTCATCGTACCCACAAAACATCCTTGGGGTTTGGTGGAAGAAAGAAGAGGCG
 
. : . : . : . : . : . :
JMFN033J12+ TGGGGTGGCACATGAACATAAGCAAGAACGGCGGCATCTTCAAAGCTGACACAGCAAGCG
JMFN009M09+ TGGGGTGGCACATGAACATAAGCAAGAACGGCGGCATCTTCAAAGCTGACACAGCAAGCG
                      ____________________________________________________________
consensus TGGGGTGGCACATGAACATAAGCAAGAACGGCGGCATCTTCAAAGCTGACACAGCAAGCG