Contig 007509:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF026H18+                                                                     TT
                      ____________________________________________________________
consensus                                                                       TT
 
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JMFF026H18+           TTTTTTTTCTTTTTTTTTAATGATAATAAGAATAATATTAATAACAATAGTAATGAACAA
JMFN013K08+                             AATGATAATAAGAATAATATTAATACCAATAGTAATGAACAA
                      ____________________________________________________________
consensus             TTTTTTTTCTTTTTTTTTAATGATAATAAGAATAATATTAATACCAATAGTAATGAACAA
 
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JMFF026H18+           CCATGAGTCAACAACAAATCAACGCAGATAATGTAATGTAATATGTCCTCAATCTCAATC
JMFN013K08+           CCATGAGTCAACAACAAATCAACGCAGATAATGTAATGTAATATGTCCTCAATCTCAATC
JMFN028B05+                                                            CAATCTCAATC
JMFN028H18+                           AATCAACGCAGATAATGTAATGTAATATGTCCTCAATCTCAATC
JMFN008A12+                                                        TCCTCAATCTCAATC
                      ____________________________________________________________
consensus             CCATGAGTCAACAACAAATCAACGCAGATAATGTAATGTAATATGTCCTCAATCTCAATC
 
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JMFF026H18+           GCCACCACCGATAAACACCGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAAAA
JMFN013K08+           GCCACCACCGATAAACACCGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAAAA
JMFN028B05+           GCCACCACCGATAANCACCGCCGCCGT-AAAACGCGGAGCAATAAACCCGAAAGTAAAAA
JMFN028H18+           GCCACCACCGATAAACACCGCCGCCGTCAAAACGCGGAGCAATAAACGCGAAAGTAAAAA
JMFN005H10+                             CGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAANA
JMFN003D22+                                                              AAGTAAAAA
JMFN025H09+                                                             AAAGTAAAAA
JMFN045J17+                             CGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAAAA
JMFS037A12+                                   CGTCAAAACGCGGAGCAATAAACCCGAAAGTAAAAA
JMFS134F01+                                  CCGTCAAAACGCGGAGCAATAAACCCGAAAGTAAAAA
JMFN008A12+           GCCACCACCGATAAACACCGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAAAA
                      ____________________________________________________________
consensus             GCCACCACCGATAAACACCGCCGCCGTCAAAACGCGGAGCAATAAACACGAAAGTAAAAA
 
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JMFF026H18+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN013K08+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN028B05+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN028H18+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN005H10+           ATAAAAAATATATANCTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN003D22+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN025H09+           ATAAAAAATATATAGCTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN001G08+                                                   ACTCCGGTGAGAATGTGACC
JMFN045J17+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFS037A12+           ATAAAAAATATATANCTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFS134F01+           ATAAAAAATATATANCTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
JMFN008A12+           ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
                      ____________________________________________________________
consensus             ATAAAAAATATATAACTAAGTAAAATTCCTAAATCATCCAACTCCGGTGAGAATGTGACC
 
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JMFF026H18+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN013K08+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN028B05+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN028H18+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN005H10+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN003D22+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN025H09+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN001G08+           GANAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN045J17+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFS037A12+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFS134F01+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
JMFN008A12+           GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
                      ____________________________________________________________
consensus             GAAAACTCAGTCAACTCGCAGATCGGAGAATTTAGAACAGCAGTGAGGCGGCGAAGAACG
 
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JMFF026H18+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN013K08+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN028B05+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN028H18+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN005H10+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN003D22+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN025H09+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN001G08+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN045J17+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFS037A12+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFS134F01+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
JMFN008A12+           CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
                      ____________________________________________________________
consensus             CCACAGCGGCGGATCCGGCCAGGGCGACTCTGTTCAAAGCGGCGGCGCTGGGAGGAGAGG
 
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JMFF026H18+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAG                      
JMFN013K08+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN028B05+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN028H18+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN005H10+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN003D22+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN025H09+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN001G08+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN045J17+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFS037A12+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFS134F01+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
JMFN008A12+           CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
                      ____________________________________________________________
consensus             CAGGAGACGAGCCGGGAGCCGAAGCGCCAGGAGGAGAGGCGATGGAGGTAGGAGTAGCAG
 
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JMFN013K08+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN028B05+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN028H18+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN005H10+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN003D22+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN025H09+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN001G08+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN045J17+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFS037A12+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFS134F01+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
JMFN008A12+           GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
                      ____________________________________________________________
consensus             GAGCGCCGGCGGGAGACGAGGCGTCAGTTGGAAGAGCCGGTGGAGAAGACAGCGGTGAGT
 
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JMFN013K08+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN028B05+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN028H18+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN005H10+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN003D22+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN025H09+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN001G08+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN045J17+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFS037A12+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFS134F01+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
JMFN008A12+           CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
                      ____________________________________________________________
consensus             CGGTAGGGGGGGAAGCGGTCGGAGCCTGAGTAGGAGCGGCGACGGGAGTCGCAGTAGGCG
 
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JMFN013K08+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAA                         
JMFN028B05+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN028H18+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN005H10+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN003D22+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN025H09+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN001G08+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN045J17+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFS037A12+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFS134F01+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
JMFN008A12+           TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
                      ____________________________________________________________
consensus             TCGCAACCGACTTCGGAGGAGATGCAACCGGAGAAGGAGATTTCTTCGGCGAAGCAGCCG
 
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JMFN028B05+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN028H18+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN005H10+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN003D22+           GCGAGGCTCCCGGAGCTTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN025H09+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN001G08+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN045J17+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFS037A12+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFS134F01+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
JMFN008A12+           GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
                      ____________________________________________________________
consensus             GCGAGGCTCCCGGAGCCTGAGCCAAAGCTGATCCGGCGACCAAAGCGAAAATCATGGCAA
 
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JMFN028B05+           AAATCACCCG                                                  
JMFN028H18+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTG                   
JMFN005H10+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFN003D22+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFN025H09+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFN001G08+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFN045J17+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFS037A12+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFS134F01+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
JMFN008A12+           AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
                      ____________________________________________________________
consensus             AAATCACCCGTGAGCAAGCCATCTTTCTCCTTTTCTCGCTGTAGACCCAAACACTGGAAG
 
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JMFN005H10+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAA                     
JMFN003D22+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAAA               
JMFN025H09+           GAAATATAGATACAGATAATTG                                      
JMFN001G08+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAA                
JMFN045J17+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAAA               
JMFS037A12+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAA                     
JMFS134F01+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAAA               
JMFN008A12+           GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAAATGCAGCCTGCAGCCC
                      ____________________________________________________________
consensus             GAAATATAGATACAGATAATTGTATGTATATCTTCAGAAACAAAATGCAGCCTGCAGCCC