| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012K18 | Sequence | 602 | 010182 (5) | ref|NP_001234609.1| | 2e-46 | prephenate aminotransferase [Solanum lycopersicum] gb|ADQ00383.1| prephenate ami | 751 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 2e-90 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMFF012L01 | Sequence | 465 | 010182 (5) | ref|XP_011090466.1| | 9e-11 | PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-preph | 711 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 4e-79 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMFF029H07 | Sequence | 373 | 010182 (5) | 770 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 1e-94 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr | |||
| JMFF035I14 | Sequence | 601 | 010182 (5) | ref|NP_001234609.1| | 2e-41 | prephenate aminotransferase [Solanum lycopersicum] gb|ADQ00383.1| prephenate ami | 706 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 2e-78 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMFN006P08 | Sequence | 538 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 5e-57 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr | |||||
| JMSF043K16 | Sequence | 760 | 010182 (5) | ref|XP_009619635.1| | 1e-82 | PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-preph | 734 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 1e-90 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
This contig is upended
. : . : . : . : . : . :
rJMFF029H07+ CAAGCTTT
____________________________________________________________
consensus CAAGCTTT
. : . : . : . : . : . :
rJMFF029H07+ GCATCTTTGCCTGGAATGTGGGAGAGGACTCTCACCGTAAATGGATTTTCTAAGGCCTTT
rJMSF043K16+ GGAATGTGGGAGAGGACTCTCACCGTAAATGGATTTTCTAAGGCCTTT
rJMFF012L01+ AGGCCTTT
rJMFF035I14+ TTT
rJMFF012K18+ GGAATGTGGGAGAGGACTCTCACCGTAAATGGATTTTCTAAGGCCTTT
____________________________________________________________
consensus GCATCTTTGCCTGGAATGTGGGAGAGGACTCTCACCGTAAATGGATTTTCTAAGGCCTTT
. : . : . : . : . : . :
rJMFF029H07+ GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
rJMSF043K16+ GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
rJMFF012L01+ GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
rJMFF035I14+ GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
rJMFF012K18+ GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
____________________________________________________________
consensus GCAATGACTGGTTGGAGACTCGGGTATATTGCCGGTCCTAAACATTTCGTTGCTGCATGC
. : . : . : . : . : . :
rJMFF029H07+ AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
rJMSF043K16+ AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
rJMFF012L01+ AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
rJMFF035I14+ AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
rJMFF012K18+ AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
____________________________________________________________
consensus AATAAAATTCAGAGCCAGTCCACTTCGGGTGCCAGCAGTATTTCACAAAAAGCGGGCGTT
. : . : . : . : . : . :
rJMFF029H07+ GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
rJMSF043K16+ GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
rJMFF012L01+ GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
rJMFF035I14+ GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
rJMFF012K18+ GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
____________________________________________________________
consensus GCTGCTTTAGGGCTGGGGTACGCTGGTGGAGAAGCAGTTGCAACGATGGTAAAGGCCTTC
. : . : . : . : . : . :
rJMFF029H07+ CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
rJMSF043K16+ CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
rJMFF012L01+ CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
rJMFF035I14+ CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
rJMFF012K18+ CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
JMFN006P08- TGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
____________________________________________________________
consensus CGTGAGCGACGTGATTTTCTGGTCAAAAGCTTCGGGGAAATGGAAGGCGTCAAGATTTCA
. : . : . : . : . : . :
rJMFF029H07+ GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
rJMSF043K16+ GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
rJMFF012L01+ GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
rJMFF035I14+ GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
rJMFF012K18+ GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
JMFN006P08- GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
____________________________________________________________
consensus GAACCTCAGGGAGCCTTCTATCTGTTTATTGACTTCAGCTCTTACTATGGAGTAGAGGTA
. : . : . : . : . : . :
rJMFF029H07+ GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
rJMSF043K16+ GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
rJMFF012L01+ GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
rJMFF035I14+ GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
rJMFF012K18+ GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
JMFN006P08- GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
____________________________________________________________
consensus GCTGGATTTGGTGCTGTGACTGATTCAGAGTCGCTATGTCGGTATTTGCTGGATAAAGCT
. : . : . : . : . : . :
rJMFF029H07+ CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
rJMSF043K16+ CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
rJMFF012L01+ CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
rJMFF035I14+ CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
rJMFF012K18+ CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
JMFN006P08- CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
____________________________________________________________
consensus CAAGTTGCTCTGGTGCCCGGTGATGCTTTTGGCGATGATACCTGTATCCGAATCTCGTAT
. : . : . : . : . : . :
rJMFF029H07+ GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
rJMSF043K16+ GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
rJMFF012L01+ GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
rJMFF035I14+ GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
rJMFF012K18+ GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
JMFN006P08- GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
____________________________________________________________
consensus GCAGCATCTCTCTCGACATTGCAGGCAGCAGTCGAAAGAATCAGGAAGGCGTTGCTCACT
. : . : . : . : . : . :
rJMFF029H07+ ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
rJMSF043K16+ ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
rJMFF012L01+ ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
rJMFF035I14+ ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
rJMFF012K18+ ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
JMFN006P08- ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
____________________________________________________________
consensus ATCAGGCCAGTTGTACCTGTTTGATGATGAATCTCTTCGTCTTCCCCGCATTTTGTGTGT
. : . : . : . : . : . :
rJMFF029H07+ TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
rJMSF043K16+ TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
rJMFF012L01+ TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
rJMFF035I14+ TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
rJMFF012K18+ TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
JMFN006P08- TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
____________________________________________________________
consensus TGGACAATTGTCATGAAAGCCAGATTTTGTTGTAACTTCAGAATCTGAGCCCTGTCTGTC
. : . : . : . : . : . :
rJMFF029H07+ TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
rJMSF043K16+ TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
rJMFF012L01+ TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
rJMFF035I14+ TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
rJMFF012K18+ TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
JMFN006P08- TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
____________________________________________________________
consensus TGCTTGTTGTATGCTTGCTTTCTTATGGTTACTAGTTTCTGAGCTTTCTGTACCCAGATT
. : . : . : . : . : . :
rJMFF029H07+ GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAA
rJMSF043K16+ GCAGAAATATGATATGATGAAATAAG
rJMFF012L01+ GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAAT
rJMFF035I14+ GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAAT
rJMFF012K18+ GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAAT
JMFN006P08- GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAATTTCTAATCAAGGTTATC
____________________________________________________________
consensus GCAGAAATATGATATGATGAAATAAGTTGATTTGCTAATAAATTTCTAATCAAGGTTATC