Contig 007505:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004N11Sequence595007505 (3)gb|ABK94904.1|6e-76unknown [Populus trichocarpa]
JMFN031F04Sequence512007505 (3)emb|CAC39165.1|3e-56vacuolar-type H+-pyrophosphatase [Solanum lycopersicum]
JMFS066H03Sequence496007505 (3)emb|CAC39165.1|5e-53vacuolar-type H+-pyrophosphatase [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS066H03+                GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
JMFN031F04+                GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
JMFN004N11+                GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
                      ____________________________________________________________
consensus                  GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
 
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JMFS066H03+           TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
JMFN031F04+           TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
JMFN004N11+           TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
                      ____________________________________________________________
consensus             TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
 
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JMFS066H03+           CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
JMFN031F04+           CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
JMFN004N11+           CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
                      ____________________________________________________________
consensus             CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
 
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JMFS066H03+           CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
JMFN031F04+           CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
JMFN004N11+           CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
                      ____________________________________________________________
consensus             CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
 
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JMFS066H03+           AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
JMFN031F04+           AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
JMFN004N11+           AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
                      ____________________________________________________________
consensus             AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
 
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JMFS066H03+           TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
JMFN031F04+           TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
JMFN004N11+           TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
                      ____________________________________________________________
consensus             TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
 
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JMFS066H03+           CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
JMFN031F04+           CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
JMFN004N11+           CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
                      ____________________________________________________________
consensus             CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
 
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JMFS066H03+           GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
JMFN031F04+           GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
JMFN004N11+           GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
                      ____________________________________________________________
consensus             GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
 
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JMFS066H03+           GAGATAGCAATCTGGACACCA                                       
JMFN031F04+           GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAG                       
JMFN004N11+           GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAGCAAGAACACCCGACAAGGTTTCA
                      ____________________________________________________________
consensus             GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAGCAAGAACACCCGACAAGGTTTCA
 
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JMFN004N11+           ACACCAAAGAAAATTCCAACAATTAGTGGAGTGAGCATGACAAGAGCACCAGGGGGAATC
                      ____________________________________________________________
consensus             ACACCAAAGAAAATTCCAACAATTAGTGGAGTGAGCATGACAAGAGCACCAGGGGGAATC