Contig 007505:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004N11Sequence595007505 (3)gb|ABK94904.1|6e-76unknown [Populus trichocarpa]
JMFN031F04Sequence512007505 (3)emb|CAC39165.1|3e-56vacuolar-type H+-pyrophosphatase [Solanum lycopersicum]
JMFS066H03Sequence496007505 (3)emb|CAC39165.1|5e-53vacuolar-type H+-pyrophosphatase [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS066H03+ GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
JMFN031F04+ GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
JMFN004N11+ GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
                      ____________________________________________________________
consensus GAATGGTAAAGAATGTAAAGGATTCCTTCCCCTAAGTGTTCCATAGTTTTGGCCA
 
. : . : . : . : . : . :
JMFS066H03+ TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
JMFN031F04+ TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
JMFN004N11+ TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
                      ____________________________________________________________
consensus TAAACCAATCAGCTCATACAAATTACAAAACGCGAGAAAAAATTGTGTCCGTGAACCCTC
 
. : . : . : . : . : . :
JMFS066H03+ CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
JMFN031F04+ CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
JMFN004N11+ CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
                      ____________________________________________________________
consensus CTCCTAGTACAACAAAATGTGGTGTGACAAAGTTAAAAGATGCAGGAGGCAAAAGGATGA
 
. : . : . : . : . : . :
JMFS066H03+ CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
JMFN031F04+ CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
JMFN004N11+ CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
                      ____________________________________________________________
consensus CTAACAGTTTCTGGTATGACAACACATGAGATTGGTGTGCTTGATTAGAATATCTTGAAG
 
. : . : . : . : . : . :
JMFS066H03+ AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
JMFN031F04+ AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
JMFN004N11+ AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
                      ____________________________________________________________
consensus AGCAGACCACCATGTGCGGCAAAGAAGGGAGCGAACACGAGTGATTCAACAGCCATGAGC
 
. : . : . : . : . : . :
JMFS066H03+ TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
JMFN031F04+ TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
JMFN004N11+ TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
                      ____________________________________________________________
consensus TTGATGAGAATGTTGAGCGACGGTCCAGATGTGTCCTTGAGAGGATCGCCAACAGTGTCA
 
. : . : . : . : . : . :
JMFS066H03+ CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
JMFN031F04+ CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
JMFN004N11+ CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
                      ____________________________________________________________
consensus CCAATCACAGCAGCCTTGTGTGCATCAGATCCCTTGGGCCCTAGTGTTCTGGCATGTTCT
 
. : . : . : . : . : . :
JMFS066H03+ GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
JMFN031F04+ GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
JMFN004N11+ GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
                      ____________________________________________________________
consensus GAAGCCCCAGCCTCAATATATTTCTTGGCATTATCCCAGGCACCACCAGTGTTGGATGCA
 
. : . : . : . : . : . :
JMFS066H03+ GAGATAGCAATCTGGACACCA
JMFN031F04+ GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAG
JMFN004N11+ GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAGCAAGAACACCCGACAAGGTTTCA
                      ____________________________________________________________
consensus GAGATAGCAATCTGGACACCAGAGACAAGGGATCCAGCAAGAACACCCGACAAGGTTTCA
 
. : . : . : . : . : . :
JMFN004N11+ ACACCAAAGAAAATTCCAACAATTAGTGGAGTGAGCATGACAAGAGCACCAGGGGGAATC
                      ____________________________________________________________
consensus ACACCAAAGAAAATTCCAACAATTAGTGGAGTGAGCATGACAAGAGCACCAGGGGGAATC