| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008J20 | Sequence | 538 | 007500 (6) | ref|XP_007046247.1| | 3e-33 | Uncharacterized protein TCM_011817 [Theobroma cacao] gb|EOY02079.1| Uncharacteri | 616 | 007500 (6) | ref|XP_004238939.1| | 160 | PREDICTED: uncharacterized protein LOC101257561 [Solanum lycopersicum] |
| JMFF051P18 | Sequence | 586 | 007500 (6) | ref|XP_006362563.1| | 136 | PREDICTED: uncharacterized protein LOC102593092 [Solanum tuberosum] | 448 | 007500 (6) | ref|XP_004238939.1| | 114 | PREDICTED: uncharacterized protein LOC101257561 [Solanum lycopersicum] |
| JMFN005B19 | Sequence | 608 | 007500 (6) | ref|XP_009804742.1| | 165 | PREDICTED: uncharacterized protein LOC104249916 [Nicotiana sylvestris] | |||||
| JMFN020H23 | Sequence | 571 | 007500 (6) | ref|XP_004238939.1| | 171 | PREDICTED: uncharacterized protein LOC101257561 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF051P18- GGCTAAAACCATCCCTTTTAAGCATCGGTATTTTCAATTTTTTT
rJMFF008J20- ATTTTTTT
____________________________________________________________
consensus GGCTAAAACCATCCCTTTTAAGCATCGGTATTTTCAATTTTTTT
. : . : . : . : . : . :
rJMFF051P18- TTTCCAGTGATTTAAGTATACTCCTTTTCTCCGCTACGGATTTAATAAAATAAAATAAAA
rJMFF008J20- TTTCCAGTGATTTAAGTATACTCCTTTTCTCCGCTACGGATTTAATAAAATAAAATAAAA
JMFN020H23+ AATAAAATAAAATAAAA
____________________________________________________________
consensus TTTCCAGTGATTTAAGTATACTCCTTTTCTCCGCTACGGATTTAATAAAATAAAATAAAA
. : . : . : . : . : . :
rJMFF051P18- TAATAATAAAAGGGAGAAAAAAAAAGATTTACATTGTCTATTGCCTATCTAAACTTCTAA
rJMFF008J20- TAATAATAAAAGGGAGAAAAAAAAAGATTTACATTGTCTATTGCCTATCTAAACTTCTAA
JMFN020H23+ TAATAATAAAAGGGAGAAAAAAAAAGATTTACATTGTCTATTGCCTATCTAAACTTCTAA
____________________________________________________________
consensus TAATAATAAAAGGGAGAAAAAAAAAGATTTACATTGTCTATTGCCTATCTAAACTTCTAA
. : . : . : . : . : . :
rJMFF051P18- TTTGCCGGTAAGGTCTCGGGTCTCCACAGATAATCACCCGACCCGAAAGCAAGATCCGAA
rJMFF008J20- TTTGCCGGTAAGGTCTCGGGTCTCCACAGATAATCACCCGACCCGAAAGCAANATCCGAA
JMFN020H23+ TTTGCCGGTAAGGTCTCGGGTCTCCACAGATAATCACCCGACCCGAAAGCAAGATCCGAA
JMFN005B19+ AATCACCCGACCCGAAAGCAAGATCCGAA
____________________________________________________________
consensus TTTGCCGGTAAGGTCTCGGGTCTCCACAGATAATCACCCGACCCGAAAGCAAGATCCGAA
. : . : . : . : . : . :
rJMFF051P18- TGGTCAAATAACCCATCCAGCGCAGCATATTCACCGCCGTTGATGTTATAGTTCTCCGAG
rJMFF008J20- TGGTCAAATAACCCATCCAGCGCAGCATATTCACCGCCGTTGATGTTATAGTTCTCCGAG
JMFN020H23+ TGGTCAAATAACCCATCCAGCGCAGCATATTCACCGCCGTTGATGTTATAGTTCTCCGAG
JMFN005B19+ TGGTCAAATAACCCATCCAGCGCAGCATATTCACCGCCGTTGATGTTATAGTTCTCCGAG
JMFF051P18+ ATCCAGCGCAGCATATTCACCGCCGTTGATGTATAGTTTCTCCGAG
____________________________________________________________
consensus TGGTCAAATAACCCATCCAGCGCAGCATATTCACCGCCGTTGATGTTATAGTTCTCCGAG
. : . : . : . : . : . :
rJMFF051P18- TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
rJMFF008J20- TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
JMFN020H23+ TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
JMFN005B19+ TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
JMFF008J20+ CGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
JMFF051P18+ TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
____________________________________________________________
consensus TCGACGATTCCAAACTCGTACGAGTCATAACTCCCAATATGGTCATCCAGGCCCCACAAA
. : . : . : . : . : . :
rJMFF051P18- CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
rJMFF008J20- CCGCCGGTGAGTTCGGCCGAGTCANAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
JMFN020H23+ CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
JMFN005B19+ CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
JMFF008J20+ CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
JMFF051P18+ CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
____________________________________________________________
consensus CCGCCGGTGAGTTCGGCCGAGTCAGAGCAAACACGGATCAACTCCGGCTTCTCCGCCTCT
. : . : . : . : . : . :
rJMFF051P18- ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTC
rJMFF008J20- ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
JMFN020H23+ ACCGGCGGTGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
JMFN005B19+ ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
JMFF008J20+ ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
JMFF051P18+ ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
____________________________________________________________
consensus ACCGGCGGCGACGCCGTAGCCGGCGGGAGGCCAAGCTCGTCGTCGGAGGCTTCCAATAGG
. : . : . : . : . : . :
rJMFF008J20- TATCCNANATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
JMFN020H23+ TATCCGAGATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
JMFN005B19+ TATCCGAGATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
JMFF008J20+ TATCCGAGATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
JMFF051P18+ TATCCGAGATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
____________________________________________________________
consensus TATCCGAGATCCGGCTGGGATTCGCCGGACTCCGACGTCAAGTCAACCACCGCTGCGGCG
. : . : . : . : . : . :
rJMFF008J20- GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
JMFN020H23+ GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
JMFN005B19+ GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
JMFF008J20+ GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
JMFF051P18+ GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
____________________________________________________________
consensus GCCGGCGTCGGCGACGCCGCAATCTCCTCCTCGAAGCTCTTCATGAAGGAGTCCAGATCC
. : . : . : . : . : . :
rJMFF008J20- TGGTCCGCCGNGCANAGCTCAAATTCATCCAGGTCATCCAACAGA
JMFN020H23+ TGGTCCGCCGTGCAGAGCTCAAATTCATCCAGGTCATCCAACAGATCCTCCCTGAGTCTC
JMFN005B19+ TGGTCCGCCGTGCAGAGCTCAAATTCATCCAGGTCATCCAACAGATCCTCCCTGAGTCTC
JMFF008J20+ TGGTCCGCCGTGCAGAGCTCAAATTCATCCAGGTCATCCAACAGATCCTCCCTGAGTCTC
JMFF051P18+ TGGTCCGCCGTGCAGAGCTCAAATTCATCCAGGTCATCCAACAGATCCTCCCTGAGTCTC
____________________________________________________________
consensus TGGTCCGCCGTGCAGAGCTCAAATTCATCCAGGTCATCCAACAGATCCTCCCTGAGTCTC
. : . : . : . : . : . :
JMFN020H23+ TTCACCTCCGGCGA
JMFN005B19+ TTCACCTCCGGCGAGTCGATCCCCAACTCGTCCGAGTCGTCTCGAACTCGCTTCTTGCAA
JMFF008J20+ TTCACCTCCGGCGAGTCGATCCCCAACTCGTCCGAGTCGTCTCGAACTCGCTTCTTGCAA
JMFF051P18+ TTCACCTCCGGCGAGTCGATCCCCAACTCGTCCGAGTCGTCTCGAACTCGCTTCTTGCAA
____________________________________________________________
consensus TTCACCTCCGGCGAGTCGATCCCCAACTCGTCCGAGTCGTCTCGAACTCGCTTCTTGCAA
. : . : . : . : . : . :
JMFN005B19+ CTCACTTCCTCCATATTAAAATACCTCCCAAAAACAAAACAAAAAAAGCGAAATGGAATC
JMFF008J20+ CTCACTTCCTCCATATTAAAATACCTCCCAAAAACAAAACAAAAAAAGCGAAATGGAATC
JMFF051P18+ CTCACTTCCTCCATATTAAAATACCTCCCAAAAACAAAACAAAAAAAGCGAAATGGAATC
____________________________________________________________
consensus CTCACTTCCTCCATATTAAAATACCTCCCAAAAACAAAACAAAAAAAGCGAAATGGAATC
. : . : . : . : . : . :
JMFN005B19+ GGTTGATTTTCTTCGAGTTGCGGTTTCGTACACAAGAGA
JMFF008J20+ GGTTGATTTTCTTCGAGTTGCGGTTTCGTACACAAGAGAGAGAAAAAGCAGTTGAAGGT
JMFF051P18+ GGTTGATTTTCTTCGAGTTGCGGTTTCGTACACAAGAGAGAGAAAAAGCAGTTGAAGGTC
____________________________________________________________
consensus GGTTGATTTTCTTCGAGTTGCGGTTTCGTACACAAGAGAGAGAAAAAGCAGTTGAAGGTC