Contig 007496:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051A10Sequence511007496 (2)dbj|BAC53938.1|1e-43Myb-like protein [Nicotiana tabacum]526015989gb|KDP41681.1|3e-21hypothetical protein JCGZ_16088 [Jatropha curcas] gb|AIT52202.1| MYB family prot
JMSF013I17Sequence430001957 (4)dbj|BAC53938.1|2e-69Myb-like protein [Nicotiana tabacum]762007496 (2)gb|KDP41681.1|4e-47hypothetical protein JCGZ_16088 [Jatropha curcas] gb|AIT52202.1| MYB family prot

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-                            ATTTCTGCAAATTATCCGGCGAAATTCTACAGACGAAGGTGA
                      ____________________________________________________________
consensus                               ATTTCTGCAAATTATCCGGCGAAATTCTACAGACGAAGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          AACTGATCCGAGACTGTCAATTTTAGAACCCCAGTGTTCAATCTTGCCGGTGCCAAATGC
                      ____________________________________________________________
consensus             AACTGATCCGAGACTGTCAATTTTAGAACCCCAGTGTTCAATCTTGCCGGTGCCAAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          CGATACGCTGCGCCGCCGCATTTTGAATTGCTTCATCAGCCTGCGTACAGAGGCCGTTGT
                      ____________________________________________________________
consensus             CGATACGCTGCGCCGCCGCATTTTGAATTGCTTCATCAGCCTGCGTACAGAGGCCGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          GTTCAACCCCGGACATGTAGTTCCTCACTTCTTTCCTTATCATCTCCTGCAGCTCTGCTA
                      ____________________________________________________________
consensus             GTTCAACCCCGGACATGTAGTTCCTCACTTCTTTCCTTATCATCTCCTGCAGCTCTGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          AGAACTCCGGGCTGAAGAAAGGCTTCTCCGCCGTTTGCGGCGGCGGTGGAGCGGCGAACT
                      ____________________________________________________________
consensus             AGAACTCCGGGCTGAAGAAAGGCTTCTCCGCCGTTTGCGGCGGCGGTGGAGCGGCGAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          GGAAGCTCTGAGGCGGCTGTGGGGGTAAATAAACTTTTGCAGGCGGAGACACCTGGGGAA
                      ____________________________________________________________
consensus             GGAAGCTCTGAGGCGGCTGTGGGGGTAAATAAACTTTTGCAGGCGGAGACACCTGGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          GCTGGGGAATAGGGAGGAGATGATTGCGTCGGTTTATCAACGGTGGAGCTTCGTTGGATC
                      ____________________________________________________________
consensus             GCTGGGGAATAGGGAGGAGATGATTGCGTCGGTTTATCAACGGTGGAGCTTCGTTGGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          CGGGCAAAGAGAGACTCAGAGAGGTAACCGGGTCGGACGACAACGACGGCGGCGTTTCCA
                      ____________________________________________________________
consensus             CGGGCAAAGAGAGACTCAGAGAGGTAACCGGGTCGGACGACAACGACGGCGGCGTTTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          TCGTCGGAAAATGAGGAGGGAGCGGGAGCGGGAGTTTCCCGCCGCCGGTTCTGGCGATGG
                      ____________________________________________________________
consensus             TCGTCGGAAAATGAGGAGGGAGCGGGAGCGGGAGTTTCCCGCCGCCGGTTCTGGCGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          GGTTATAGATATCGCTAAAATCGGAGTCGGAAGGGCTGAGATGAAGACCGGACATGTTCA
                      ____________________________________________________________
consensus             GGTTATAGATATCGCTAAAATCGGAGTCGGAAGGGCTGAGATGAAGACCGGACATGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          CCCCGAGGCCGTCGCTAGAAGATCTCTTGAGCGGCAGCCCACGCGGCGGCGGCGGCTCAA
                      ____________________________________________________________
consensus             CCCCGAGGCCGTCGCTAGAAGATCTCTTGAGCGGCAGCCCACGCGGCGGCGGCGGCTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          AGCTCAAGTTTTCCGACGACACGGAACCGCACTTGCGTTTCANAGTAGAATTCCAGTGAT
JMFF051A10+                                                          GAGTTCCAGTGAT
                      ____________________________________________________________
consensus             AGCTCAAGTTTTCCGACGACACGGAACCGCACTTGCGTTTCANAGTAGAGTTCCAGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013I17-          TCTTAATGGCGTTATCCGTCCGGCCACTAAGCAACCGGGCTATGGTGGCCCACTT     
JMFF051A10+           TCTTAATAGCGTTATCCGTCCGGCCATGTAGCAACCGGGCAATGGTGGCCCACTTGTTAC
                      ____________________________________________________________
consensus             TCTTAATGGCGTTATCCGTCCGGCCATTTAGCAACCGGGCTATGGTGGCCCACTTGTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           CGAACTTAGAATGCGACCGTATGATAATCTCATCCTCTTCCGCCGTGAACGCCCGGTGCT
                      ____________________________________________________________
consensus             CGAACTTAGAATGCGACCGTATGATAATCTCATCCTCTTCCGCCGTGAACGCCCGGTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           CCACCTGCGGCGACAGCTGGTTACACCACCGGAGCCGGACGACTTTCCGGATCTACCACA
                      ____________________________________________________________
consensus             CCACCTGCGGCGACAGCTGGTTACACCACCGGAGCCGGACGACTTTCCGGATCTACCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           AATAGATTTGCTGATCAGAGACCAATTCCTCGCACCGTACTTCTCCACCAGCTTCTGTAA
                      ____________________________________________________________
consensus             AATAGATTTGCTGATCAGAGACCAATTCCTCGCACCGTACTTCTCCACCAGCTTCTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           CAGCTCATCTTCTTCCGGGCTCCACGGACCCTTGATCCGATCCGTAACCTTTCTCCGTGC
                      ____________________________________________________________
consensus             CAGCTCATCTTCTTCCGGGCTCCACGGACCCTTGATCCGATCCGTAACCTTTCTCCGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           GCTAGTCGCCATTAACTCAACACAGXXXXXXXXXXXXXXXXXXXXXXCCTAACTTACACA
                      ____________________________________________________________
consensus             GCTAGTCGCCATTAACTCAACACAGNNNNNNNNNNNNNNNNNNNNNNCCTAACTTACACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051A10+           GATACTAAAGGCCAGAAGCTGAAAGTGTTTAAACGGCGCAGAGGCGTACGCGCCTCCGTG
                      ____________________________________________________________
consensus             GATACTAAAGGCCAGAAGCTGAAAGTGTTTAAACGGCGCAGAGGCGTACGCGCCTCCGTG