Contig 007494:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H06Sequence593007494 (3)ref|XP_009780813.1|295PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]709009858 (2)ref|XP_009780813.1|312PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]
JMFF050K18Sequence583007494 (3)ref|XP_009780813.1|292PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]561009858 (2)ref|XP_009780813.1|184PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]
JMFN034J06Sequence605007494 (3)ref|XP_009780813.1|311PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN034J06+ GGGGATGAAAATGGTGCGATCC
                      ____________________________________________________________
consensus GGGGATGAAAATGGTGCGATCC
 
. : . : . : . : . : . :
JMFN034J06+ CGTAGTGGTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
JMFF003H06+ GTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCANNTAAGAAA
JMFF050K18+ AATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
                      ____________________________________________________________
consensus CGTAGTGGTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
 
. : . : . : . : . : . :
JMFN034J06+ TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
JMFF003H06+ TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
JMFF050K18+ TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGCCAGTGAACCCGACCACTAGAGAG
                      ____________________________________________________________
consensus TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
 
. : . : . : . : . : . :
JMFN034J06+ CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
JMFF003H06+ CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
JMFF050K18+ CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
                      ____________________________________________________________
consensus CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
 
. : . : . : . : . : . :
JMFN034J06+ TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
JMFF003H06+ TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
JMFF050K18+ TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
                      ____________________________________________________________
consensus TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
 
. : . : . : . : . : . :
JMFN034J06+ CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCATCC
JMFF003H06+ CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
JMFF050K18+ CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
                      ____________________________________________________________
consensus CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
 
. : . : . : . : . : . :
JMFN034J06+ TTGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
JMFF003H06+ TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
JMFF050K18+ TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
                      ____________________________________________________________
consensus TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
 
. : . : . : . : . : . :
JMFN034J06+ AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
JMFF003H06+ AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
JMFF050K18+ AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
                      ____________________________________________________________
consensus AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
 
. : . : . : . : . : . :
JMFN034J06+ GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
JMFF003H06+ GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
JMFF050K18+ GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
                      ____________________________________________________________
consensus GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
 
. : . : . : . : . : . :
JMFN034J06+ TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
JMFF003H06+ TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
JMFF050K18+ TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
                      ____________________________________________________________
consensus TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
 
. : . : . : . : . : . :
JMFN034J06+ TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAG
JMFF003H06+ TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCT
JMFF050K18+ TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCTC
                      ____________________________________________________________
consensus TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCTC