Contig 007494:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H06Sequence593007494 (3)ref|XP_009780813.1|295PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]709009858 (2)ref|XP_009780813.1|312PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]
JMFF050K18Sequence583007494 (3)ref|XP_009780813.1|292PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]561009858 (2)ref|XP_009780813.1|184PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]
JMFN034J06Sequence605007494 (3)ref|XP_009780813.1|311PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN034J06+                                                 GGGGATGAAAATGGTGCGATCC
                      ____________________________________________________________
consensus                                                   GGGGATGAAAATGGTGCGATCC
 
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JMFN034J06+           CGTAGTGGTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
JMFF003H06+                  GTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCANNTAAGAAA
JMFF050K18+                            AATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
                      ____________________________________________________________
consensus             CGTAGTGGTAAGGGCTGAATCATGACGTCGCGACAAGCTTTGCCCCATGCAACTAAGAAA
 
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JMFN034J06+           TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
JMFF003H06+           TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
JMFF050K18+           TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGCCAGTGAACCCGACCACTAGAGAG
                      ____________________________________________________________
consensus             TTGCTGGTGGAGTGGCCGTCCGCCACGAGGTGGTGGGCAGTGAACCCGACCACTAGAGAG
 
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JMFN034J06+           CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
JMFF003H06+           CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
JMFF050K18+           CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
                      ____________________________________________________________
consensus             CCACATGTGAAACGTGTGACCTGGACTTGGACCAGCTCCACCACCCCCTTGAGACTAGGG
 
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JMFN034J06+           TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
JMFF003H06+           TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
JMFF050K18+           TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
                      ____________________________________________________________
consensus             TGAAGGTTGAGCAGAGACACGGATGGCTTGAAAGGCATTACCTTATCAAGAGTGGTGTCA
 
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JMFN034J06+           CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCATCC
JMFF003H06+           CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
JMFF050K18+           CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
                      ____________________________________________________________
consensus             CCCGACGCCTCTACAAACTTCACTCCTTCATCGTTCAGCAAAACGACAGGGTTCCCCTCC
 
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JMFN034J06+           TTGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
JMFF003H06+           TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
JMFF050K18+           TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
                      ____________________________________________________________
consensus             TCGTCATTGCCCAATCTCCCCGCCCACTCCCTATACACTCCAAGCGCTTTTCTAAGCCCC
 
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JMFN034J06+           AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
JMFF003H06+           AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
JMFF050K18+           AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
                      ____________________________________________________________
consensus             AACTCGATGGTGCTATTCGGAGGGGTGGGCGGGCGATAGGCGTAAATAACAGCAATCTGA
 
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JMFN034J06+           GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
JMFF003H06+           GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
JMFF050K18+           GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
                      ____________________________________________________________
consensus             GCATCATATGAGACCTTATCAAACACACTAAGAGGAACATGGGTTGTTGTTAATGGAGGA
 
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JMFN034J06+           TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
JMFF003H06+           TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
JMFF050K18+           TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
                      ____________________________________________________________
consensus             TTGCCTTCATACGAAGGTTTAATGGTTCTCGTACTCTCTACCTTCACCTTCATGGTTTTT
 
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JMFN034J06+           TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAG                 
JMFF003H06+           TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCT 
JMFF050K18+           TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCTC
                      ____________________________________________________________
consensus             TTCTCGACAAAATGTACGAAGAAAACAATCAAACTAGATTTAGGTTGATCTGACTATCTC