Contig 007489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008E10Sequence604007489 (3)ref|XP_009797001.1|1e-56PREDICTED: ankyrin-3 [Nicotiana sylvestris]715002731 (2)ref|XP_008357856.1|3e-78PREDICTED: protein phosphatase 1 regulatory subunit 12C-like [Malus domestica]
JMFF050A03Sequence604007489 (3)ref|XP_009797001.1|1e-55PREDICTED: ankyrin-3 [Nicotiana sylvestris]592002731 (2)ref|XP_006338680.1|1e-58PREDICTED: ankyrin-3-like [Solanum tuberosum]
JMFS068C08Sequence605007489 (3)ref|XP_009797001.1|2e-64PREDICTED: ankyrin-3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS068C08+ GATTAACATCTCCAAAATCTCAAGGTGGTTCTCCCTCACAGCT
JMFF008E10+ AGCT
JMFF050A03+ AGCT
                      ____________________________________________________________
consensus GATTAACATCTCCAAAATCTCAAGGTGGTTCTCCCTCACAGCT
 
. : . : . : . : . : . :
JMFS068C08+ ACTGTAGTAGCATATCCCCTGAAAAGTTTCTGGTTCACATCTGCTCCAATACTCAGCAGT
JMFF008E10+ ACTGTAGTAGCATATCCCCTGAAAAGTTTCTGGTTCACATCTGCTCCAATACTCAGCAGT
JMFF050A03+ ACTGTAGTAGCATATCCCCTGAAAAGTTTCTGGTTCACATCTGCTCCAATACTCAGCAGT
                      ____________________________________________________________
consensus ACTGTAGTAGCATATCCCCTGAAAAGTTTCTGGTTCACATCTGCTCCAATACTCAGCAGT
 
. : . : . : . : . : . :
JMFS068C08+ TTCCTCACGAGTGCGACATTGCCGTTATGCACGGCCAGGAACAATGCGGTGACGTCGGTC
JMFF008E10+ TTCCTCACGAGTGCGACATTGCCGTTATGCACGGCCAGGAACAATGCGGTGACGTCGGTC
JMFF050A03+ TTCCTCACGAGTGCGACATNGCCGTTATGCACGGCCAGGAACAATGCGGTGACGTCGGTC
                      ____________________________________________________________
consensus TTCCTCACGAGTGCGACATTGCCGTTATGCACGGCCAGGAACAATGCGGTGACGTCGGTC
 
. : . : . : . : . : . :
JMFS068C08+ TTAAACTCCTCGTAACCGACTCGAACTTCGTTGGGAGACTCCTCGCGCAGCACCACCTCC
JMFF008E10+ TTAAACTCCTCGTAACCGACTCGAACTTCGTTGGGAGACTCCTCGCGCAGCACCACCTCC
JMFF050A03+ TTAAACTCCTCGTAACCGACTCGAACTTCGTTGGGAGACTCCTCGCGCAGCACCACCTCC
                      ____________________________________________________________
consensus TTAAACTCCTCGTAACCGACTCGAACTTCGTTGGGAGACTCCTCGCGCAGCACCACCTCC
 
. : . : . : . : . : . :
JMFS068C08+ GCCTTGCGCACCTTGAGACAAACATCGCCGACGAAGTTGACGTCGACGAAGGAATCCTGG
JMFF008E10+ GCCTTGCGCACCTTGAGACAAACATCGCCGACGAAGTTGACGTCGACGAAGGAATCCTGG
JMFF050A03+ GCCTTGCGCACCTTGAGACAAACATCGCCGACGAAGTTGACGTCGACGAAGGAATCCTGG
                      ____________________________________________________________
consensus GCCTTGCGCACCTTGAGACAAACATCGCCGACGAAGTTGACGTCGACGAAGGAATCCTGG
 
. : . : . : . : . : . :
JMFS068C08+ AGGCACTCAAGCGCCGCTGCTAGATCGTTGGAATGCGAAGCTTCCAGAAGGCGTCGTGAC
JMFF008E10+ AGGCACTCAAGCGCCGCTGCTAGATCGTTGGAATGCGAAGCTTCCAGAAGGCGTCGTGAC
JMFF050A03+ AGGCACTCAAGCGCCGCTGCTAGATCGTTGGAATGCGAAGCTTCCAGAAGGCGTCGTGAC
                      ____________________________________________________________
consensus AGGCACTCAAGCGCCGCTGCTAGATCGTTGGAATGCGAAGCTTCCAGAAGGCGTCGTGAC
 
. : . : . : . : . : . :
JMFS068C08+ ACCTCAGCTTCGTAGTTCACCGGAAAAACCTGCTTTCCGGCCAGGAAACCGCCGCCTCCA
JMFF008E10+ ACCTCAGCTTCGTAGTTCACCGGAAAAACCTGCTTTCCGGCCAGGAAACCGCCGCCTCCA
JMFF050A03+ ACCTCAGCTTCGTAGTTCACCGGAAAAACCTGCTTTCCGGCCAGGAAACCGCCGCCTCCA
                      ____________________________________________________________
consensus ACCTCAGCTTCGTAGTTCACCGGAAAAACCTGCTTTCCGGCCAGGAAACCGCCGCCTCCA
 
. : . : . : . : . : . :
JMFS068C08+ CCTGAATGTCCAAAAACAGTCATTTCCTGCCAAGCAAAACACTGTCACTGCCTCTTCTGT
JMFF008E10+ CCTGAATGTCCAAAAACAGTCATTTCCTGCCAAGCAAAACACTGTCACTGCCTCTTCTGT
JMFF050A03+ CCTGAATGTCCAAAAACAGTCATTTCCTGCCAAGCAAAACACTGTCACTGCCTCTTCTGT
                      ____________________________________________________________
consensus CCTGAATGTCCAAAAACAGTCATTTCCTGCCAAGCAAAACACTGTCACTGCCTCTTCTGT
 
. : . : . : . : . : . :
JMFS068C08+ TCCTCTGTCTAGATCTATCAGTGTCTATATATCTCTACAGAGAAGAAGCAGCAGAGGAAT
JMFF008E10+ TCCTCTGTCTAGATCTATCAGTGTCTATATATCTCTACAGAGAAGAAGCAGCAGAGGAAT
JMFF050A03+ TCCTCTGTCTAGATCTATCAGTGTCTATATATCTCTACAGAGAAGAAGCAGCAGAGGAAT
                      ____________________________________________________________
consensus TCCTCTGTCTAGATCTATCAGTGTCTATATATCTCTACAGAGAAGAAGCAGCAGAGGAAT
 
. : . : . : . : . : . :
JMFS068C08+ CATCAGCAGAATTGTTTAATACTCTCTTTGTCGCTCTCTATCTCTCTCTGCGGGAGAATG
JMFF008E10+ CATCAGCAGAATTGTTTAATACTCTCTTTGTCGCTCTCTATCTCTCTCTGCGGGAGAATG
JMFF050A03+ CATCAGCAGAATTGTTTAATACTCTCTTTGTCGCTCTCTATCTCTCTCTGCGGGAGAATG
                      ____________________________________________________________
consensus CATCAGCAGAATTGTTTAATACTCTCTTTGTCGCTCTCTATCTCTCTCTGCGGGAGAATG
 
. : . : . : . : . : . :
JMFS068C08+ GAGACGCGAGACTCGAGGTGGA
JMFF008E10+ GAGACGCGAGACTCGAGGTGGAGTGGGTGAAGGAAGGAAACTTGAAAGAAGTGAG
JMFF050A03+ GAGACGCGAGACTCGAGGTGGAGTGGGTGAAGGAAGGAAACTTGAAAGAAGTGAGCGCCC
                      ____________________________________________________________
consensus GAGACGCGAGACTCGAGGTGGAGTGGGTGAAGGAAGGAAACTTGAAAGAAGTGAGCGCCC