clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF047O14 | Sequence | 410 | 007484 (5) | ref|XP_009591927.1| | 2e-58 | PREDICTED: zinc finger protein 598 [Nicotiana tomentosiformis] | |||||
JMFS006F01 | Sequence | 586 | 007484 (5) | gb|KDP28319.1| | 3e-98 | hypothetical protein JCGZ_14090 [Jatropha curcas] | |||||
JMFS104H06 | Sequence | 610 | 007484 (5) | gb|KDP28319.1| | 4e-107 | hypothetical protein JCGZ_14090 [Jatropha curcas] | |||||
JMFS151D08 | Sequence | 614 | 007484 (5) | gb|KDP28319.1| | 4e-116 | hypothetical protein JCGZ_14090 [Jatropha curcas] | |||||
JMSF012H18 | Sequence | 428 | 007484 (5) | ref|XP_009591927.1| | 2e-58 | PREDICTED: zinc finger protein 598 [Nicotiana tomentosiformis] | 809 | 018148 | ref|XP_011079489.1| | 3e-30 | PREDICTED: zinc finger protein 598 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFS151D08+ GCAGAATTCAC
____________________________________________________________
consensus GCAGAATTCAC
. : . : . : . : . : . :
JMFS151D08+ ACATAGGATGACCCATGAAGCCACCTCTCTCACTCTCAGTTCCATCAACCTCAGAGTCTC
JMFS104H06+ AGCCACCTCTCTCACTCTCAGTTCCATCAACCTCAGAGTCTC
JMFS006F01+ GTCTC
____________________________________________________________
consensus ACATAGGATGACCCATGAAGCCACCTCTCTCACTCTCAGTTCCATCAACCTCAGAGTCTC
. : . : . : . : . : . :
JMFS151D08+ CACTATTTATATGTTGATTTAGCTGTGCTCTAGTATAGAGTTTTTGCTCACAAATAAATA
JMFS104H06+ CACTATTTATATGTTGATTTAGCTGTGCTCTAGTATAGAGTTTTTGCTCACAAATAAATA
JMFS006F01+ CACTATTTATATGTTGATTTAGCTGTGCTCTAGTATAGAGTTTTTGCTCACAAATAAATA
____________________________________________________________
consensus CACTATTTATATGTTGATTTAGCTGTGCTCTAGTATAGAGTTTTTGCTCACAAATAAATA
. : . : . : . : . : . :
JMFS151D08+ CCTTACGTCCTTCCAAGCACAAACTGCACATTAACAGTCTATGTTGGTGAAACAGATGAC
JMFS104H06+ CCTTACGTCCTTCCAAGCACAAACTGCACATTAACAGTCTATGTTGGTGAAACAGATGAC
JMFS006F01+ CCTTACGTCCTTCCAAGCACAAACTGCACATTAACAGTCTATGTTGGTGAAACAGATGAC
____________________________________________________________
consensus CCTTACGTCCTTCCAAGCACAAACTGCACATTAACAGTCTATGTTGGTGAAACAGATGAC
. : . : . : . : . : . :
JMFS151D08+ CCTTCAACTGCTCAATGTTCCTGAACTTCCCCCTTCTTTTAGGGCCTTCTCCAGATTGCT
JMFS104H06+ CCTTCAACTGCTCAATGTTCCTGAACTTCCCCCTTCTTTTAGGGCCTTCTCCAGATTGCT
JMFS006F01+ CCTTCAACTGCTCAATGTTCCTGAACTTCCCCCTTCTTTTAGGGCCTTCTCCAGATTGCT
JMSF012H18+ CTCCAGATTGCT
____________________________________________________________
consensus CCTTCAACTGCTCAATGTTCCTGAACTTCCCCCTTCTTTTAGGGCCTTCTCCAGATTGCT
. : . : . : . : . : . :
JMFS151D08+ CCTCCATCCTATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
JMFS104H06+ CCTCCATCCTATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
JMFS006F01+ CCTCCATCCTATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
JMSF012H18+ CCTCCATCCTATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
JMFF047O14+ ATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
____________________________________________________________
consensus CCTCCATCCTATCACACACACTACATGATAGCCTGCACATGGCTCTGATCATCTTATAGT
. : . : . : . : . : . :
JMFS151D08+ GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCTGATCGAC
JMFS104H06+ GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCTGATCGAC
JMFS006F01+ GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCTGATCGAC
JMSF012H18+ GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCTGATCGAC
JMFF047O14+ GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCAGATCGAC
____________________________________________________________
consensus GATCAGAATCATCGAAGAAAGCTTGAATGCCTTCATGATACCAATATGACCCTGATCGAC
. : . : . : . : . : . :
JMFS151D08+ CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGGGTATAGTCTCCTA
JMFS104H06+ CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGGGTATAGTCTCCTA
JMFS006F01+ CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGGGTATAGTCTCCTA
JMSF012H18+ CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGGGTATAGTCTCCTA
JMFF047O14+ CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGCGTATAGTCTCCTA
____________________________________________________________
consensus CCTCTTTTGGTTCAGGCGGAAAAACTGCAAATTCGCTTATGATACGGGTATAGTCTCCTA
. : . : . : . : . : . :
JMFS151D08+ GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
JMFS104H06+ GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
JMFS006F01+ GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
JMSF012H18+ GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
JMFF047O14+ GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
____________________________________________________________
consensus GAGCCTTGGTAACGAAGACAATACTGTTTTCGGTCTTACAAATACAGCATCGTCGATCGT
. : . : . : . : . : . :
JMFS151D08+ CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
JMFS104H06+ CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
JMFS006F01+ CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
JMSF012H18+ CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
JMFF047O14+ CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
____________________________________________________________
consensus CGCAGATGAATCGTAAACGAGCAACACAAGTAGAACACACATCCTTGTGACCGCAGGCAC
. : . : . : . : . : . :
JMFS151D08+ CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
JMFS104H06+ CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
JMFS006F01+ CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
JMSF012H18+ CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
JMFF047O14+ CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
____________________________________________________________
consensus CATATGCAACCCATTCTAGGGTTTCCGCGCACACTGCACAAGTATCATCCATAGCCTTCG
. : . : . : . : . : . :
JMFS151D08+ ACG
JMFS104H06+ ACGATCTGAGCTCAATTACAAACTTTTG
JMFS006F01+ ACGATCTGAGCTCAATTACAAACTTTTGCCTAAGATTGGCG
JMSF012H18+ ACGATCTGAGCTCAATTACAAACTTTTGCCTAAGATTGGCGTTTCGATGACTTT
JMFF047O14+ ATGTTCTGAGCTAAATTACAAACTTTTGCCTAAGATTGGCGTTTCGATGACTTTTATACT
____________________________________________________________
consensus ACGATCTGAGCTCAATTACAAACTTTTGCCTAAGATTGGCGTTTCGATGACTTTTATACT