Contig 007476:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012E06+                                          CTGCTGGTCAACAATGGCTTCTCTTCTC
                      ____________________________________________________________
consensus                                             CTGCTGGTCAACAATGGCTTCTCTTCTC
 
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rJMSF012E06+          GTTTATCTTTGCATCGTGTTTAGTCCACTCCTAGTTTTCAAGCTTTACGGTGTTCCCCTC
                      ____________________________________________________________
consensus             GTTTATCTTTGCATCGTGTTTAGTCCACTCCTAGTTTTCAAGCTTTACGGTGTTCCCCTC
 
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rJMSF012E06+          TTGATTTTTGTCATGTGGTTGGATCTCGTCACCTACTTGCATCACCATGGTTACGATAAG
                      ____________________________________________________________
consensus             TTGATTTTTGTCATGTGGTTGGATCTCGTCACCTACTTGCATCACCATGGTTACGATAAG
 
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rJMSF012E06+          AAGGTCCCGTGGTATCGTGGCAAGGAATGGAATTATTTGAGGGGAGGATTAACGACAATT
                      ____________________________________________________________
consensus             AAGGTCCCGTGGTATCGTGGCAAGGAATGGAATTATTTGAGGGGAGGATTAACGACAATT
 
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rJMSF012E06+          GACCGTGATTATGGAATCATTAACAACATCCATCATGATATTGGCACCCATGTTATCCAC
                      ____________________________________________________________
consensus             GACCGTGATTATGGAATCATTAACAACATCCATCATGATATTGGCACCCATGTTATCCAC
 
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rJMSF012E06+          CATTTGTTTCCCCAGATTCCCCACTATCATTTAATTGAAGCCACGAAAGCTGCGAAGCCG
                      ____________________________________________________________
consensus             CATTTGTTTCCCCAGATTCCCCACTATCATTTAATTGAAGCCACGAAAGCTGCGAAGCCG
 
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rJMSF012E06+          GTGCTGGGGAAGTACTACAGGGAGCCGAAGAAGTCGGGGCTGATTCCGTTCCATCTCATT
                      ____________________________________________________________
consensus             GTGCTGGGGAAGTACTACAGGGAGCCGAAGAAGTCGGGGCTGATTCCGTTCCATCTCATT
 
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rJMSF012E06+          CCCGTTCTGACAAAGAGCATGAGCGAGGATCACTATGTGAGCGACGAGGGGGAAGTCGTT
                      ____________________________________________________________
consensus             CCCGTTCTGACAAAGAGCATGAGCGAGGATCACTATGTGAGCGACGAGGGGGAAGTCGTT
 
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rJMSF012E06+          TTCTACCAGACCGATAGAGATATAAGTTCTAAAAAGGACGCTTGAGAGATGGGGAGGCTC
                      ____________________________________________________________
consensus             TTCTACCAGACCGATAGAGATATAAGTTCTAAAAAGGACGCTTGAGAGATGGGGAGGCTC
 
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rJMSF012E06+          TCTTCTTCTGGTTTTTTAGAGTGTATCTGTCAAAGACTAGAATTTCTGGCATATTGCCAT
JMFF017L22+                       TTTTTAGAGTGTATCTGTCAAAGACTAGAATTTCTGGCATATTGCCAT
                      ____________________________________________________________
consensus             TCTTCTTCTGGTTTTTTAGAGTGTATCTGTCAAAGACTAGAATTTCTGGCATATTGCCAT
 
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rJMSF012E06+          ATTTGGTGATAAATTTATCCCTAGTTATTACAGTAGAGAAGAGAAATGAAGAAGAAGCTT
JMFF017L22+           ATTTGGTGATAAATTTATCCCTAGTTATTACAGTAGAGAAGAGAAATGAAGAAGAAGCTT
                      ____________________________________________________________
consensus             ATTTGGTGATAAATTTATCCCTAGTTATTACAGTAGAGAAGAGAAATGAAGAAGAAGCTT
 
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rJMSF012E06+          ATACAGTGTACTTTTGGGGCAAAAGAATGGGTGGTTTTGCCCATTCCAGGCCTCATCCAT
JMFF017L22+           ATACAGTGTACTTTTGGGGCAAAAGAATGGGTGGTTTTGCCCATTCCAGGCCTCATCCAT
JMFF025H02+                           GGGCAAAAGAATGGGTGGTTTTGCCCATTCCAGGCCTCATCCAT
                      ____________________________________________________________
consensus             ATACAGTGTACTTTTGGGGCAAAAGAATGGGTGGTTTTGCCCATTCCAGGCCTCATCCAT
 
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rJMSF012E06+          TGCAT                                                       
JMFF017L22+           TGCATTGAAATTTTGCTAATGGAATAAAAATGATTGATAATTATGAGTCTTCAAAGTCGT
JMFF025H02+           TGCATTGAAATTTTGCTAATGGAATAAAAATGATTGATAATTATGAGTCTTCAAAGTCGT
JMFF046L14+                               GGAATAAAAATGATGNATAATTATGAGTCTTCAAAGTCGT
                      ____________________________________________________________
consensus             TGCATTGAAATTTTGCTAATGGAATAAAAATGATTGATAATTATGAGTCTTCAAAGTCGT
 
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JMFF017L22+           TTTGTGGTGCAGAACAGTGGTAGCAGATACTCTAAATCTTGACAGTTTTAGTGTTCATCG
JMFF025H02+           TTTGTGGTGCAGAACAGTGGTAGCAGATACTCTAAATCTTGACAGTTTTAGTGTTCATCG
JMFF046L14+           TNTGTGGTGCAGAACAGTGGTAGCAGATACTCTAAATCTTGACAGTTTTAGTGTTCATCG
                      ____________________________________________________________
consensus             TTTGTGGTGCAGAACAGTGGTAGCAGATACTCTAAATCTTGACAGTTTTAGTGTTCATCG
 
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JMFF017L22+           TATTTGAATAATTGGTTATTGGTCCAAGAAGCTGTCTTTTTCATGGATTGTGATGGATGA
JMFF025H02+           TATTTGAATAATTGGTTATTGGTCCAAGAAGCTGTCTTTTTCATGGATTGTGATGGATGA
JMFF046L14+           TATTTGAATAATTGGTTATTGGTCCAAGAAGCTGTCTTTTTCATGGATTGTGATGGATGA
                      ____________________________________________________________
consensus             TATTTGAATAATTGGTTATTGGTCCAAGAAGCTGTCTTTTTCATGGATTGTGATGGATGA
 
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JMFF017L22+           GGAGCATGGCACCAAACATGTTAGCACTACTCACTCTGCCATGAAAAAGATGACAGACTT
JMFF025H02+           GGAGCATGGCACCAAACATGTTAGCACTACTCACTCTGCCATGAAAAAGATGACAGACTT
JMFF046L14+           GGAGCATGGCACCAAACATGTTAGCACTACTCACTCTGCCATGAAAAAGATGACAGACTT
                      ____________________________________________________________
consensus             GGAGCATGGCACCAAACATGTTAGCACTACTCACTCTGCCATGAAAAAGATGACAGACTT
 
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JMFF017L22+           GTCCCCATGGTCTGCTCAAGACTTGGTTCATTTCTTTTGGGGATTTTCAATAGGTTTAAT
JMFF025H02+           GTCCCCATGGTCTGCTCAAGACTTGGTTCATTTCTTTTGGGGATTTTCAATAGGTTTAAT
JMFF046L14+           GTCCCCATGGTCTGCTCAAGACTTGGTTCATTTCTTTTGGGGATTTTCAATAGGTTTAAT
                      ____________________________________________________________
consensus             GTCCCCATGGTCTGCTCAAGACTTGGTTCATTTCTTTTGGGGATTTTCAATAGGTTTAAT
 
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JMFF017L22+           TCTATGTTAAAAAGGTTGTGTACATTAATCTACTTTAGACACTAAAGATAAGTGCTTTTG
JMFF025H02+           TCTATGTTAAAAAGGTTGTGTACATTAATCTACTTTAGACACTAAAGATAAGTGCTTTTG
JMFF046L14+           TCTATGTTAAAAAGGTTGTGTACATTAATCTACTTTAGACACTAAAGATAAGTGCTTTTG
                      ____________________________________________________________
consensus             TCTATGTTAAAAAGGTTGTGTACATTAATCTACTTTAGACACTAAAGATAAGTGCTTTTG
 
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JMFF017L22+           TTTTTTGCCCAACTTGCCCAACTTGATAACTTAGCTTTATAGTTACGGCAGAAACCTCTT
JMFF025H02+           TTTTTTGCCCAACTTGCCCAACTTGATAACTTAGCTTTATAGTTACGGCAGAAACCTCTT
JMFF046L14+           TTTTTTGCCCAACTTGCCCAACTTGATAACTTAGCTTTATAGTTACGGCAGAAACCTCTT
                      ____________________________________________________________
consensus             TTTTTTGCCCAACTTGCCCAACTTGATAACTTAGCTTTATAGTTACGGCAGAAACCTCTT
 
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JMFF017L22+           TCACCGACCTCAGAGCAAGAGGCTTGAGTTTCCAGGACCAGAGGGGTGAAA         
JMFF025H02+           TCACCGACCTCAGAGCAAGAGGCTTGAGTTTCCAGGACCAGAGGGGTGAAA         
JMFF046L14+           TCACCGACCTCAGAGCAAGAGGCTTGAGTTTCCAGGACCAGAGGGGTGAAATTCTCGACG
                      ____________________________________________________________
consensus             TCACCGACCTCAGAGCAAGAGGCTTGAGTTTCCAGGACCAGAGGGGTGAAATTCTCGACG