Contig 007466:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043M01-                                                   CCTTATGGCGGATCACCCT
                      ____________________________________________________________
consensus                                                      CCTTATGGCGGATCACCCT
 
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rJMFF043M01-          GGAGAGTTTTTTTTTTTTTTTTATTTATGTATATATATTATATCCCAATTAACTTTAAGA
                      ____________________________________________________________
consensus             GGAGAGTTTTTTTTTTTTTTTTATTTATGTATATATATTATATCCCAATTAACTTTAAGA
 
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rJMFF043M01-          TAATCAATAATGTTATTGACGCTCATAGAGCTCAACCTGTCGTCCATCCAGGGGCTGGAT
                      ____________________________________________________________
consensus             TAATCAATAATGTTATTGACGCTCATAGAGCTCAACCTGTCGTCCATCCAGGGGCTGGAT
 
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rJMFF043M01-          TGGCCTTGAATTCCTCTTGCATGCCGAATCCAATGGAGCTCTCAGAGCTACAACTTGTTC
                      ____________________________________________________________
consensus             TGGCCTTGAATTCCTCTTGCATGCCGAATCCAATGGAGCTCTCAGAGCTACAACTTGTTC
 
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rJMFF043M01-          TCTTGATACTGAATGAATCTTGGCAATGACGGTCCATATAATATCTTCAGTGCATGGAGG
                      ____________________________________________________________
consensus             TCTTGATACTGAATGAATCTTGGCAATGACGGTCCATATAATATCTTCAGTGCATGGAGG
 
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rJMFF043M01-          GGTAGTGAGGGAGCCAACATATCTGTAATACTTATGGCTATGGGAAAATTTGACCAATTC
                      ____________________________________________________________
consensus             GGTAGTGAGGGAGCCAACATATCTGTAATACTTATGGCTATGGGAAAATTTGACCAATTC
 
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rJMFF043M01-          ATGGGTGTTCAGATTTCCTAGAAAAATCCGAGGTTTCTCTTGTCTTAATAACTCGCTAGG
                      ____________________________________________________________
consensus             ATGGGTGTTCAGATTTCCTAGAAAAATCCGAGGTTTCTCTTGTCTTAATAACTCGCTAGG
 
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rJMFF043M01-          CAGCTCAGTCAGTTGCTTTTGTATCTTAGCAAGAAGGGGATCAGGACGGCCTAATTTGAG
JMFF037B02+                                                                   TGAG
JMFF043M01+                                             AGGGGATCAGGACGGCCTAATNTGAG
                      ____________________________________________________________
consensus             CAGCTCAGTCAGTTGCTTTTGTATCTTAGCAAGAAGGGGATCAGGACGGCCTAATTTGAG
 
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rJMFF043M01-          GAGGACTGCCAATACCGCCACGCTGTTATCAGGAGCAATGTGAACCAGGTGAAGCTCAGC
JMFF037B02+           GAGGACTGCCAATACCGCCACACTGTTATCAGGAGCAATGTGAACCAGGTGAAGCTCAGC
JMFF043M01+           GAGGACTGCCAATACCGCCACGCTGTTATCAGGAGCAATGTGAACCAGGTGAAGCTCAGC
                      ____________________________________________________________
consensus             GAGGACTGCCAATACCGCCACGCTGTTATCAGGAGCAATGTGAACCAGGTGAAGCTCAGC
 
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rJMFF043M01-          TGCAAAGTGAAATCCATCAATCTGGTGCTCAGAAGGGGCATGCCAGTGCATTTGCTTCAG
JMFF037B02+           TGCAAAGTGAAATCCATCAATCTGGTGCTCAGAAGGGGCATGCCAGTGCATTTGCTTCAG
JMFF043M01+           TGCAAAGTGAAATCCATCAATCTGGTGCTCAGAAGGGGCATGCCAGTGCATTTGCTTCAG
                      ____________________________________________________________
consensus             TGCAAAGTGAAATCCATCAATCTGGTGCTCAGAAGGGGCATGCCAGTGCATTTGCTTCAG
 
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rJMFF043M01-          TCTGTAGATCTTCCCTTCCAAAACCAAAGCTCCTGCATCTTCACCATAACTTATCCCAAC
JMFF037B02+           TCTGTAGATCTTCCCTTCCAAAACCAAAGCTCCTGCATCTTCACCATAACTTATCCCAAC
JMFF043M01+           TCTGTAGATCTTCCCTTCCAAAACCAAAGCTCCTGCATCTTCACCATAACTTATCCCAAC
                      ____________________________________________________________
consensus             TCTGTAGATCTTCCCTTCCAAAACCAAAGCTCCTGCATCTTCACCATAACTTATCCCAAC
 
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rJMFF043M01-          ATTAAACCCATTGTCCATCANAGTAGCATTGACAG                         
JMFF037B02+           ATTAAACCCATTGTCCATCAAAGTAGCATTGACAGACCGACTATATTTCATCTCCAGAGG
JMFF043M01+           ATTAAACCCATTGTCCATCAAAGTAGCATTGACAGACCGACTATATTTCATCTCCAGAGG
                      ____________________________________________________________
consensus             ATTAAACCCATTGTCCATCAAAGTAGCATTGACAGACCGACTATATTTCATCTCCAGAGG
 
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JMFF037B02+           CTTCAACTTCTTGTTAATGACAGCTTTGTGGCGGAGGATGTTGATTGGGGACTGTGATTT
JMFF043M01+           CTTCAACTTCTTGTTAATGACAGCTTTGTGGCGGAGGATGTTGATTGGGGACTGTGATTT
                      ____________________________________________________________
consensus             CTTCAACTTCTTGTTAATGACAGCTTTGTGGCGGAGGATGTTGATTGGGGACTGTGATTT
 
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JMFF037B02+           CCCATTGGAGCATGCTGAGAATGCAGGGTTTAAGGCTCCCCACCGGGCCGGGCCCGTTAT
JMFF043M01+           CCCATTGGAGCATGCTGAGAATGCAGGGTTTAAGGCTCCCCACCGGGCCGGGCCCGTTAT
                      ____________________________________________________________
consensus             CCCATTGGAGCATGCTGAGAATGCAGGGTTTAAGGCTCCCCACCGGGCCGGGCCCGTTAT
 
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JMFF037B02+           GCCTGAGTAGCTGAAGTTGAGTGCCATGCCGTGGTGGTGGTGGTAGTGTTCCCCATGAAG
JMFF043M01+           GCCTGAGTAGCTGAAGTTGAGTGCCATGCCGTGGTGGTGGTGGTAGTGTTCCCCATGAAG
                      ____________________________________________________________
consensus             GCCTGAGTAGCTGAAGTTGAGTGCCATGCCGTGGTGGTGGTGGTAGTGTTCCCCATGAAG
 
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JMFF037B02+           AACTGAGACTGCAGATGCAAAGGGATTGAATATGGTGAGAAATGCAGAGACTGCAAGGAC
JMFF043M01+           AACTGAGACTGCAGATGCAAAGGGATTGAATATGGTGAGAAATGCAGAGACTGCAAGGAC
                      ____________________________________________________________
consensus             AACTGAGACTGCAGATGCAAAGGGATTGAATATGGTGAGAAATGCAGAGACTGCAAGGAC
 
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JMFF037B02+           AAAAAACTTGGCCATTTCTGTGAAATTCTAAGCTCTTCCTCCTCTTTGGAGAAATATGAT
JMFF043M01+           AAAAAACTTGGCCATTTCTGTGAAATTCTAAGCTCTTCCTCCTCTTTGGAGAAATATGAT
                      ____________________________________________________________
consensus             AAAAAACTTGGCCATTTCTGTGAAATTCTAAGCTCTTCCTCCTCTTTGGAGAAATATGAT
 
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JMFF037B02+           TTCAACTTTCCT                                                
JMFF043M01+           TTCAACTTTCCTTTTTTCTTATTCCTGTTCGATCTGGCTTTATTCTTTGTATATAGTTCA
                      ____________________________________________________________
consensus             TTCAACTTTCCTTTTTTCTTATTCCTGTTCGATCTGGCTTTATTCTTTGTATATAGTTCA