Contig 007460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042H21Sequence508007460 (2)
JMSF046B02Sequence756007098 (12)ref|XP_009601394.1|4e-74PREDICTED: uncharacterized protein LOC104096687 isoform X2 [Nicotiana tomentosi647007460 (2)ref|XP_010313708.1|6e-29PREDICTED: heme-binding-like protein At3g10130, chloroplastic isoform X2 [Solan

Alignment

This contig is upended


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rJMSF046B02+                                                              TCAGATGA
                      ____________________________________________________________
consensus                                                                 TCAGATGA
 
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rJMSF046B02+          TCAAAAATCCCAAAGTCTCGATCCAGATNGNTCTTCCATCAACTAAATCTTNGGACAGTT
                      ____________________________________________________________
consensus             TCAAAAATCCCAAAGTCTCGATCCAGATNGNTCTTCCATCAACTAAATCTTNGGACAGTT
 
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rJMSF046B02+          TACCAACCCCGAATGANGAAGGATTAAAATTGAGGAAAGTTGAAGGAGGCATTGNNGCAG
                      ____________________________________________________________
consensus             TACCAACCCCGAATGANGAAGGATTAAAATTGAGGAAAGTTGAAGGAGGCATTGNNGCAG
 
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rJMSF046B02+          TGACCAAANTCAGCGGGAANCCAACAGAGAACATTGTTCTTGAGAAGGAGAAAGAGCTGA
                      ____________________________________________________________
consensus             TGACCAAANTCAGCGGGAANCCAACAGAGAACATTGTTCTTGAGAAGGAGAAAGAGCTGA
 
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rJMSF046B02+          GGTCTAGTCTTATTAGAAANGGCCTCGAACGTAAACCGGGGTGCCTGCTTGCTCGCTACA
                      ____________________________________________________________
consensus             GGTCTAGTCTTATTAGAAANGGCCTCGAACGTAAACCGGGGTGCCTGCTTGCTCGCTACA
 
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rJMSF046B02+          ATGATCCTGATAAAACTTGGGAACACATAATGGTATCCACTCCCATCCTCACTTGTTTTA
JMFF042H21-                                           GTATGCACTCCCATCCTCACTTGTTTTA
                      ____________________________________________________________
consensus             ATGATCCTGATAAAACTTGGGAACACATAATGGTATGCACTCCCATCCTCACTTGTTTTA
 
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rJMSF046B02+          GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
JMFF042H21-           GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
                      ____________________________________________________________
consensus             GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
 
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rJMSF046B02+          GACNTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
JMFF042H21-           GACCTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
                      ____________________________________________________________
consensus             GACCTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
 
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rJMSF046B02+          CGGTAACACCCCNTCAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
JMFF042H21-           CGGTAACACCCCTTAAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
                      ____________________________________________________________
consensus             CGGTAACACCCCTTCAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
 
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rJMSF046B02+          TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCNAGATCTCT
JMFF042H21-           TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCTAGATCTCT
                      ____________________________________________________________
consensus             TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCTAGATCTCT
 
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rJMSF046B02+          ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTNGGCTCT
JMFF042H21-           ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTTGGCTCT
                      ____________________________________________________________
consensus             ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTTGGCTCT
 
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rJMSF046B02+          ATTTNGNGTATGCTA                                             
JMFF042H21-           ATTTTGCGTATGCTAGCAATGATCCCTTCATCTCTATCTCCTACCTGATTTCATTTACTG
                      ____________________________________________________________
consensus             ATTTTGCGTATGCTAGCAATGATCCCTTCATCTCTATCTCCTACCTGATTTCATTTACTG
 
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JMFF042H21-           TGATGATTGAAGAGAAATGAAGTGCTTATATGGCTGGAGGAATTCTCACTGGATTGATGC
                      ____________________________________________________________
consensus             TGATGATTGAAGAGAAATGAAGTGCTTATATGGCTGGAGGAATTCTCACTGGATTGATGC
 
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JMFF042H21-           TTTGGCAATTTTGGTACCTGGAGTAGAGGAGCAGTAGCACATATTTTTCGTATAGGCAGC
                      ____________________________________________________________
consensus             TTTGGCAATTTTGGTACCTGGAGTAGAGGAGCAGTAGCACATATTTTTCGTATAGGCAGC