| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014I06 | Sequence | 496 | 007457 (8) | ref|XP_009592276.1| | 4e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
| JMFF041N11 | Sequence | 566 | 007457 (8) | ref|XP_009592276.1| | 8e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | 560 | 007457 (8) | ref|XP_009592276.1| | 8e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] |
| JMFN017M18 | Sequence | 527 | 007457 (8) | ref|XP_009592276.1| | 6e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
| JMFN020L17 | Sequence | 389 | 007457 (8) | ref|XP_009592276.1| | 7e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
| JMFN032I24 | Sequence | 422 | 007457 (8) | ref|XP_009592276.1| | 4e-23 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
| JMFN035B15 | Sequence | 477 | 007457 (8) | ref|XP_009592276.1| | 3e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
| JMFN045J01 | Sequence | 491 | 007457 (8) | ref|XP_009592276.1| | 4e-24 | PREDICTED: protein 108-like [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN017M18+ GTAACTT
rJMFF041N11- ATTTTTTAGAGTCGAATTTGTAACTT
JMFF041N11+ ATTTTTTAGAGTCGAATTTGTAACTT
____________________________________________________________
consensus ATTTTTTAGAGTCGAATTTGTAACTT
. : . : . : . : . : . :
JMFN045J01+ AGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
JMFN035B15+ AGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
JMFN020L17+ GCATGCATGTTTTGTTATTGAATTGAA
JMFN017M18+ TAATTGTAGTTACTGCTTTTGAGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
rJMFF014I06- CATGTTTTGTTATTGAATTGAA
rJMFF041N11- TAATTGTAGTTACTGCTTTTGAGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
JMFF041N11+ TAATTGTAGTTACTGCTTTTGAGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
____________________________________________________________
consensus TAATTGTAGTTACTGCTTTTGAGATACAAACATGCATGCATGTTTTGTTATTGAATTGAA
. : . : . : . : . : . :
JMFN045J01+ GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
JMFN035B15+ GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
JMFN032I24+ GAAATTAACATTATTACACTGGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
JMFN020L17+ GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
JMFN017M18+ GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
rJMFF014I06- GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
rJMFF041N11- GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
JMFF041N11+ GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
____________________________________________________________
consensus GAAATTAACATTATTACACTCGAAATCTGATTATAAAGAAACTGAAATTAAACTTCCTCC
. : . : . : . : . : . :
JMFN045J01+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
JMFN035B15+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
JMFN032I24+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
JMFN020L17+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTACGGAGCAAGAGATGGAGG
JMFN017M18+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
rJMFF014I06- GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
rJMFF041N11- GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
JMFF041N11+ GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
____________________________________________________________
consensus GGTCCGATCCGATCACGTACGCTCCGGTGGGGCGTTAGTTTGCGGAGCAAGAGATGGAGG
. : . : . : . : . : . :
JMFN045J01+ GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
JMFN035B15+ GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
JMFN032I24+ GGATGTTGCCCTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
JMFN020L17+ GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
JMFN017M18+ GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
rJMFF014I06- GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
rJMFF041N11- GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
JMFF041N11+ GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
____________________________________________________________
consensus GGATGTTGCACTGTGCGGGAATGCGAGCGGCGACGCGGAGGGTGTTGCAGATGCAGTCGT
. : . : . : . : . : . :
JMFN045J01+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
JMFN035B15+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
JMFN032I24+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
JMFN020L17+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
JMFN017M18+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
rJMFF014I06- GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
rJMFF041N11- GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
JMFF041N11+ GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
____________________________________________________________
consensus GATCCATGCTTTGTACGACGCTGCAACAGTCGGCGCTGGGGGCGGTGGTCACGGCGCCCG
. : . : . : . : . : . :
JMFN045J01+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
JMFN035B15+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
JMFN032I24+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
JMFN020L17+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
JMFN017M18+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
rJMFF014I06- GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
rJMFF041N11- GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGAGAGGCGGTGCACGTGTCAGTCT
JMFF041N11+ GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGAGAGGCGGTGCACGTGTCAGTCT
____________________________________________________________
consensus GCATCACAAACGGAGCGCACACGTTCAGATTCCCTAGCGAGGCGGTGCACGTGTCAGTCT
. : . : . : . : . : . :
JMFN045J01+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
JMFN035B15+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
JMFN032I24+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
JMFN020L17+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
JMFN017M18+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
rJMFF014I06- GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
rJMFF041N11- GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
JMFF041N11+ GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
____________________________________________________________
consensus GGGAGTTCGCCGCCTGCAGGAACTGTGCCGCCATCATCACGGCCAACGCCACCCAAACAA
. : . : . : . : . : . :
JMFN045J01+ CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
JMFN035B15+ CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
JMFN032I24+ CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
JMFN020L17+ CC
JMFN017M18+ CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
rJMFF014I06- CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
rJMFF041N11- CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
JMFF041N11+ CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
____________________________________________________________
consensus CCATTCTCTTTGACTTTCCCGCCATTGCTAGCTTGGCTCCGGCAGATCGGGCTATTAATT
. : . : . : . : . : . :
JMFN045J01+ ATTTAACTTGATTTCGTTTCTAGCTAGAGTGA
JMFN035B15+ ATTTAACTTGATTTCGTT
JMFN032I24+ AT
JMFN017M18+ ATTTAACTTGATTTCGTTTCTAGCTAGAGTGATATACCAA
rJMFF014I06- ATTTAACTTGATTTCGTTTCTAGCTAGAGTGATATACCAACG
rJMFF041N11- ATTTAACTTGATTTCGTTTCTAGCTAGAGTGATATACCAACG
JMFF041N11+ ATTTAACTTGATTTCGTTTCTAGCTACAGTCATATACCAACGCGCGGTTCAACATCGGTT
____________________________________________________________
consensus ATTTAACTTGATTTCGTTTCTAGCTAGAGTGATATACCAACGCGCGGTTCAACATCGGTT