| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041M14 | Sequence | 631 | 007456 (5) | emb|CDO97109.1| | 2e-69 | unnamed protein product [Coffea canephora] | 611 | 006169 (3) | emb|CDO97108.1| | 4e-54 | unnamed protein product [Coffea canephora] |
| JMFF043M13 | Sequence | 603 | 007456 (5) | gb|ABI93819.1| | 6e-68 | fatty acid 9/13-hydroperoxide lyase [Solanum pennellii] | 437 | 019166 | |||
| JMFS034A05 | Sequence | 523 | 007456 (5) | gb|KCW63866.1| | 6e-59 | hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis] | |||||
| JMFS092E06 | Sequence | 620 | 007456 (5) | gb|KCW63866.1| | 4e-61 | hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis] | |||||
| JMFS132D04 | Sequence | 646 | 007456 (5) | emb|CDO97109.1| | 2e-73 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS132D04+ TGCTAGCGG
____________________________________________________________
consensus TGCTAGCGG
. : . : . : . : . : . :
JMFS132D04+ TGGCGCCCAGCTTGGTGTCCGCCGGATTCTTGTTGTANCAGTACAGCCGGAATATAAACT
____________________________________________________________
consensus TGGCGCCCAGCTTGGTGTCCGCCGGATTCTTGTTGTANCAGTACAGCCGGAATATAAACT
. : . : . : . : . : . :
JMFS034A05+ GACTTACCATTCAGCTTCACCTGCT
JMFS132D04+ CCATCGCCTTATTATCATTCAGATCGTTAAAACTGGACTTACCATTCAGCTTCACCTGCT
JMFS092E06+ TCACCTGCT
JMFF043M13+ TCACCTGCT
JMFF041M14+ TCACCTGCT
____________________________________________________________
consensus CCATCGCCTTATTATCATTCAGATCGTTAAAACTGGACTTACCATTCAGCTTCACCTGCT
. : . : . : . : . : . :
JMFS034A05+ CTTCCAAGGTGGTGAACAGATCGGAGTAGACGGGTGGTGAACTGGGGAATAACCTTATCC
JMFS132D04+ CTTCCAAGGTGGTGAACAGATCGGAGTAGAC-GGTGGTGAACTGGGGAATAACCTTATCC
JMFS092E06+ CTTCCAAGGTGGTGAACAGATCGGAGTAGAC-GGTGGTGAGCTGGGGAATAACCTTATCC
JMFF043M13+ CTTCCAAGGTGGTGAACAGATCGGAGTAGAC-GGTGGTGAACTGGGGAATAACCTTATCC
JMFF041M14+ CTTCCAAGGTGGTGAACAGATCGGAGTAGAC-GGTGGTGAACTGGGGAATAACCTTATCC
____________________________________________________________
consensus CTTCCAAGGTGGTGAACAGATCGGAGTAGAC-GGTGGTGAACTGGGGAATAACCTTATCC
. : . : . : . : . : . :
JMFS034A05+ TTAAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
JMFS132D04+ TTGAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
JMFS092E06+ TTGAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
JMFF043M13+ TTGAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
JMFF041M14+ TTGAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
____________________________________________________________
consensus TTGAGCTTCGCCAGAGTGGCCAGAAAAAACCCTTTCAAGGTGGCGTGTTTGGGCTCCGAC
. : . : . : . : . : . :
JMFS034A05+ GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
JMFS132D04+ GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
JMFS092E06+ GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
JMFF043M13+ GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
JMFF041M14+ GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
____________________________________________________________
consensus GGGTCAAGAAAAGCGCACATGCGGTAGCCGCCGGTGAACTTGGTGGAAGCCATGTACGTC
. : . : . : . : . : . :
JMFS034A05+ CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
JMFS132D04+ CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
JMFS092E06+ CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
JMFF043M13+ CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
JMFF041M14+ CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
____________________________________________________________
consensus CCTTCAAACAGATCTTTCTTCTCCACCTTGGACACGTCGAAGAGAATGGGGAAGCTGGTG
. : . : . : . : . : . :
JMFS034A05+ TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
JMFS132D04+ TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
JMFS092E06+ TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
JMFF043M13+ TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
JMFF041M14+ TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
____________________________________________________________
consensus TTGTCGAGGAGTACGATGACTTTGGAGTTCTTCGCCATGAACGGTCCCGGCGGCATGTTG
. : . : . : . : . : . :
JMFS034A05+ CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
JMFS132D04+ CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
JMFS092E06+ CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
JMFF043M13+ CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
JMFF041M14+ CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
____________________________________________________________
consensus CTCCGGAACACCGTCGACTGGTACTTATCTTTCCGGCTCTGGAAGAACTCAACCTCGCCT
. : . : . : . : . : . :
JMFS034A05+ TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
JMFS132D04+ TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
JMFS092E06+ TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
JMFF043M13+ TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
JMFF041M14+ TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
____________________________________________________________
consensus TGGTTATAGAAGTAATCGTAGCGGTCTAAGATGGGACCCAGGAAGGGGAGGCCATAGCTG
. : . : . : . : . : . :
JMFS034A05+ CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
JMFS132D04+ CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
JMFS092E06+ CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
JMFF043M13+ CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
JMFF041M14+ CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
____________________________________________________________
consensus CCGGGGATATCGACCACCGGAATGTTGTCGGCGAGATCCGGATCGAGAGAGGAAGAAGAC
. : . : . : . : . : . :
JMFS034A05+ ATCAATGGAGCTGAAGAC
JMFS132D04+ ATCAATGGAGCTGAAGACATTTTTATGTTTTCTTGACT
JMFS092E06+ ATCAATGGAGCTGAAGACATTTTTATGTTTTCTTGACT
JMFF043M13+ ATCAATGGAGCTGAAGACATTTTTATGTTTTCTTGACTTTA
JMFF041M14+ ATCAATGGAGCTGAAGACATTTTTATGTTTTCTTGACTTTACAACGTTGGTTTAATTTTT
____________________________________________________________
consensus ATCAATGGAGCTGAAGACATTTTTATGTTTTCTTGACTTTACAACGTTGGTTTAATTTTT