| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041M06 | Sequence | 558 | 007455 (6) | ref|XP_006445107.1| | 1e-37 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P | 471 | 007455 (6) | ref|XP_006445107.1| | 1e-35 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P |
| JMFN014I13 | Sequence | 499 | 007455 (6) | ref|XP_006445107.1| | 1e-37 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P | |||||
| JMFN038N11 | Sequence | 581 | 007455 (6) | ref|XP_006445107.1| | 2e-37 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P | |||||
| JMFN044F20 | Sequence | 529 | 007455 (6) | ref|XP_006445107.1| | 1e-37 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P | |||||
| JMFN044O18 | Sequence | 578 | 007455 (6) | ref|XP_006445107.1| | 2e-37 | hypothetical protein CICLE_v10023111mg [Citrus clementina] ref|XP_006491045.1| P | |||||
This contig is upended
. : . : . : . : . : . :
JMFN038N11+ TTTTAGAAGAAGAAGTGTATCACTT
JMFN044F20+ AGAAGAAGAAGTGTATCACTT
JMFN044O18+ AGAAGAAGAAGTGTATCACTT
____________________________________________________________
consensus TTTTAGAAGAAGAAGTGTATCACTT
. : . : . : . : . : . :
JMFN038N11+ TATTAAGAACAAATTTTAAGGCCAACCTCCCAAGATTATACAGAGAGCAGCACAAGACAG
JMFN044F20+ TATTAAGAACAAATTTTAAGGCCAACCTCCCAAGATTATACAGAGAGCAGCACAAGACAG
JMFN014I13+ AGCAGCACAAGACAG
rJMFF041M06- AGCACAAGACAG
JMFN044O18+ TATTAAGAACAAATTTTAAGGCCAACCTCCCAAGATTATACAGAGAGCAGCACAAGACAG
JMFF041M06+ AGCACAAGACAG
____________________________________________________________
consensus TATTAAGAACAAATTTTAAGGCCAACCTCCCAAGATTATACAGAGAGCAGCACAAGACAG
. : . : . : . : . : . :
JMFN038N11+ TCATTTC-TATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
JMFN044F20+ TCATTTCTTATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
JMFN014I13+ TCATTTCTTATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
rJMFF041M06- TCATTTTTTATTCAATCCAAAATGGTTATTTTGAAAACTTGCTAAGTTCAAATTGAAAAA
JMFN044O18+ TCATTTCTTATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
JMFF041M06+ TCATTTCTTATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
____________________________________________________________
consensus TCATTTCTTATTCAATCCAAAATGGTTATCTTGAAGACTTGCTAAGTTCAAATTGAAAAA
. : . : . : . : . : . :
JMFN038N11+ TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
JMFN044F20+ TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
JMFN014I13+ TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
rJMFF041M06- TTCCAAGAAATAGGGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
JMFN044O18+ TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
JMFF041M06+ TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
____________________________________________________________
consensus TTCCAAGAAATAGTGAAATACACAATTTCAGGATCCAATTACACAGTTTATCCACAGAAC
. : . : . : . : . : . :
JMFN038N11+ AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
JMFN044F20+ AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
JMFN014I13+ AGATGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
rJMFF041M06- AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTTTTTCGTCCC
JMFN044O18+ AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
JMFF041M06+ AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
____________________________________________________________
consensus AGCTGATATCCATGACAGTTTCACTGACAAACTAGCACAAAATTAGTATTCTTTCGTCCC
. : . : . : . : . : . :
JMFN038N11+ GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
JMFN044F20+ GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
JMFN014I13+ GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
rJMFF041M06- GAAGTTCTTGCACCAAAGCTGAAAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
JMFN044O18+ GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
JMFF041M06+ GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
____________________________________________________________
consensus GAAGTTCTTGCACCAGAGCTGAGAGGGAATTGGCCTGACCGGATTATGGGGCCTTTGCTC
. : . : . : . : . : . :
JMFN038N11+ GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
JMFN044F20+ GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
JMFN014I13+ GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
rJMFF041M06- GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAAAACGATTCCTGCCATGGCGAT
JMFN044O18+ GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
JMFF041M06+ GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
____________________________________________________________
consensus GAGCTGGGCGGATTTCATGGCGATGGGAATGCAAATGAGAACGATTCCTGCCATGGCGAT
. : . : . : . : . : . :
JMFN038N11+ GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
JMFN044F20+ GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
JMFN014I13+ GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
rJMFF041M06- GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAAAC
JMFN044O18+ GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
JMFF041M06+ GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
____________________________________________________________
consensus GGCGGTATTGCGTTTCCAGTGCACGGGCCTGCAATTAGGTCCGCCGGTCATGGTCCAGAC
. : . : . : . : . : . :
JMFN038N11+ CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
JMFN044F20+ CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
JMFN014I13+ CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
rJMFF041M06- CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGGGGTGTCCGTGGTCTCCTCCACCCAT
JMFN044O18+ CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
JMFF041M06+ CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
____________________________________________________________
consensus CTTGGCCCGGAAGTCGCCGGCCGCATCGGCGTGGTGGTGTCCGTGGTCTCCTCCACCCAT
. : . : . : . : . : . :
JMFN038N11+ GTTGTTGAGAGCGTCGAGATTACAGAAATGGCGATGTGGAATTGGGGAGATTGCGAGTAG
JMFN044F20+ GTTGTTGAGAGCGTCGAGATTACAGAAA
JMFN014I13+ GTTGTTGAGAGCGTCGAGATTACAGAAATGGCGATGTGGAATTGGGGAGATTGCGAGTAG
rJMFF041M06- GTTGTTGAGAGCGTTGAGATTACAAAAATGGCAATGTGG
JMFN044O18+ GTTGTTGAGAGCGTCGAGATTACAGAAATGGCGATGTGGAATTGGGGAGATTGCGAGTAG
JMFF041M06+ GTTGTTGAGAGCGTCGAGATTACAGAAATGGCGATGTGGAATTGGGGAGATTATGAGTAG
____________________________________________________________
consensus GTTGTTGAGAGCGTCGAGATTACAGAAATGGCGATGTGGAATTGGGGAGATTGCGAGTAG
. : . : . : . : . : . :
JMFN038N11+ CGACTCGTTCACTTAAA
JMFN014I13+ CGAC
JMFN044O18+ CGACTTGTTCACTTAAA
JMFF041M06+ CGACTCGTTCACTTAAAGAAATTACAAGCCCTAATCTTGTAAACCGGTCCTTTACGGGTT
____________________________________________________________
consensus CGACTCGTTCACTTAAAGAAATTACAAGCCCTAATCTTGTAAACCGGTCCTTTACGGGTT