Contig 007454:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O22Sequence536007454 (13)emb|CDP12195.1|2e-81unnamed protein product [Coffea canephora]753013149 (12)gb|KJB39580.1|2e-71hypothetical protein B456_007G020300 [Gossypium raimondii]
JMFF011N22Sequence549007454 (13)ref|XP_009619852.1|5e-61PREDICTED: luminal-binding protein 4-like [Nicotiana tomentosiformis]566013149 (12)sp|Q03683.1|BIP3_TOBAC5e-62RecName: Full=Luminal-binding protein 3; Short=BiP 3; AltName: Full=78 kDa gluc
JMFF014L10Sequence452007454 (13)ref|XP_010266633.1|9e-60PREDICTED: luminal-binding protein 5-like [Nelumbo nucifera]773013149 (12)sp|Q03682.1|BIP2_TOBAC4e-96RecName: Full=Luminal-binding protein 2; Short=BiP 2; AltName: Full=78 kDa gluc
JMFF024B19Sequence371007454 (13)ref|XP_010266633.1|1e-34PREDICTED: luminal-binding protein 5-like [Nelumbo nucifera]
JMFF027P09Sequence570007454 (13)emb|CDP12195.1|3e-86unnamed protein product [Coffea canephora]733013149 (12)gb|KHG19744.1|3e-93Luminal-binding 5 [Gossypium arboreum]
JMFF033D24Sequence493007454 (13)emb|CDP12195.1|2e-71unnamed protein product [Coffea canephora]751013149 (12)gb|KHG19744.1|8e-92Luminal-binding 5 [Gossypium arboreum]
JMFF038J07Sequence391007454 (13)ref|XP_010266633.1|3e-45PREDICTED: luminal-binding protein 5-like [Nelumbo nucifera]733013149 (12)gb|KHG19744.1|2e-102Luminal-binding 5 [Gossypium arboreum]
JMFF041J04Sequence666007454 (13)emb|CDP12195.1|2e-85unnamed protein product [Coffea canephora]454013149 (12)gb|ABK95666.1|9e-29unknown [Populus trichocarpa]
JMFF042P07Sequence633007454 (13)emb|CDP12195.1|2e-95unnamed protein product [Coffea canephora]
JMFF049K02Sequence629007454 (13)emb|CDP12195.1|1e-103unnamed protein product [Coffea canephora]651013149 (12)sp|Q03683.1|BIP3_TOBAC1e-68RecName: Full=Luminal-binding protein 3; Short=BiP 3; AltName: Full=78 kDa gluc
JMFS044D07Sequence612007454 (13)emb|CDP12195.1|2e-96unnamed protein product [Coffea canephora]
JMSF017D11Sequence476007454 (13)emb|CDP12195.1|1e-71unnamed protein product [Coffea canephora]768013149 (12)sp|Q03682.1|BIP2_TOBAC8e-107RecName: Full=Luminal-binding protein 2; Short=BiP 2; AltName: Full=78 kDa gluc
JMSF037E06Sequence595007454 (13)emb|CDP12195.1|1e-95unnamed protein product [Coffea canephora]719013149 (12)gb|KHG19744.1|2e-94Luminal-binding 5 [Gossypium arboreum]

Alignment

This contig is upended


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JMFS044D07+                                                   TCCCAAGGAATGCTTCAGCT
JMFF049K02+                                                   TCCCAAGGAATGCTTCAGCT
JMFF042P07+                                                   TCCCAAGGAATGCTTCAGCT
                      ____________________________________________________________
consensus                                                     TCCCAAGGAATGCTTCAGCT
 
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JMFS044D07+           GTCTCCTTCATC-TTGTTAGAATCATGGCACTGATTTCCTCAGGGCTGAAGACTTTAACT
JMFF049K02+           GTCTCCTTCATCTTTGTTAGAATCATGGCACTGATTTCCTCAGGGCTGAAGACTTTAACT
JMSF037E06+                              GAATCATGGCACTGATTTCCTCAGGGCTGAAGACTTTAACT
JMFF042P07+           GTCTCCTTCATC-TTGTANGAATCATGGCACTGATTTCCTCAGGGCTGAAGACTTTAACT
JMFF027P09+                                                          GAAGACTTTAACT
JMFF041J04+                                                               CTTTAACT
                      ____________________________________________________________
consensus             GTCTCCTTCATC-TTGTTAGAATCATGGCACTGATTTCCTCAGGGCTGAAGACTTTAACT
 
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JMSF017D11+                                                                   GTAA
JMFS044D07+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF049K02+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF006O22+                      GATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF033D24+                                                                   GTAA
JMSF037E06+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF042P07+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF027P09+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF011N22+                    CTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
JMFF041J04+           TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
                      ____________________________________________________________
consensus             TCCCCATCTCTGATTTTGACTTGTATATAAGGCTTGCCATCCTTGTTAATAATCTTGTAA
 
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JMSF017D11+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFS044D07+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF049K02+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF006O22+           GGAACAAGCTTCATATCCCTNTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF033D24+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMSF037E06+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF042P07+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF027P09+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
JMFF011N22+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTATCCCTCAAACTTTCTTCCAATAAGCCT
JMFF014L10+                                                   AACTTTCTTCCAATAAGCCT
JMFF041J04+           GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
                      ____________________________________________________________
consensus             GGAACAAGCTTCATATCCCTCTGGACTTCCTTAT-CCTCAAACTTTCTTCCAATAAGCCT
 
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JMSF017D11+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFS044D07+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF049K02+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF006O22+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF033D24+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF024B19+                                                                     CC
JMSF037E06+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF042P07+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF027P09+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF011N22+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF014L10+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
JMFF038J07+                                                            GCAGCCTCACC
JMFF041J04+           CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
                      ____________________________________________________________
consensus             CTTAACATCAAAGATAGTCCTTTCATGGTTGACAGCTGCCTGGTTCTTTGCAGCCTCACC
 
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JMSF017D11+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFS044D07+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF049K02+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGGTC
JMFF006O22+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF033D24+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF024B19+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMSF037E06+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF042P07+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF027P09+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF011N22+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF014L10+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
JMFF038J07+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATNCGATTTCCTTGATC
JMFF041J04+           AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
                      ____________________________________________________________
consensus             AATCAATCTTTCTGTGTCAGTGAATGCCACCCATGATGGTGTAATACGATTTCCTTGATC
 
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JMSF017D11+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFS044D07+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF049K02+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF006O22+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF033D24+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF024B19+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMSF037E06+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF042P07+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF027P09+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF011N22+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF014L10+           ATTTGCTATGATTTCAACATTACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF038J07+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
JMFF041J04+           ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
                      ____________________________________________________________
consensus             ATTTGCTATGATTTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAAGTTGTTCC
 
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JMSF017D11+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFS044D07+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF049K02+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF006O22+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF033D24+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF024B19+           AAGATCAATTCCAATAACAGTTCNTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMSF037E06+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF042P07+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF027P09+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTACTCCTTTGCGATAGAAATTGC
JMFF011N22+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF014L10+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF038J07+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
JMFF041J04+           AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
                      ____________________________________________________________
consensus             AAGATCAATTCCAATAACAGTTCCTAATTTTGTTGCCTCCTCCTTTGCGATAGAAATTGC
 
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JMSF017D11+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFS044D07+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF049K02+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF006O22+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF033D24+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF024B19+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACCAGAACCACCTCGCCTCCAAT
JMSF037E06+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF042P07+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF027P09+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF011N22+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF014L10+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF038J07+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
JMFF041J04+           AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
                      ____________________________________________________________
consensus             AGATAGACATCCAATGAAGACGATCGCTAGCACGACGACC-GAACCACCTCGCCTCCAAT
 
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JMSF017D11+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFS044D07+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF049K02+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF006O22+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF033D24+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF024B19+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMSF037E06+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF042P07+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF027P09+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATT
JMFF011N22+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF014L10+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF038J07+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
JMFF041J04+           AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
                      ____________________________________________________________
consensus             AGCCTCCCACGGCCATGGTTTACCTGTCACTTCCTCTCTTCACCTACAAATCCTTTAATC
 
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JMSF017D11+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACT       
JMFS044D07+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGT     
JMFF049K02+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF006O22+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF033D24+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF024B19+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMSF037E06+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF042P07+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF027P09+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF011N22+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF014L10+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF038J07+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
JMFF041J04+           GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
                      ____________________________________________________________
consensus             GAAGACTGAGAGATAACTAGACGCTCCAAAAGCGAGCTCGAGAAGCGTCGACTGTGTTAT
 
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JMFF049K02+           AAGGGTGGCGA                                                 
JMFF006O22+           AAGGGTGGC                                                   
JMFF033D24+           AAGGGTGG                                                    
JMFF024B19+           AAGGGTGGC                                                   
JMSF037E06+           AAGGGTGGC                                                   
JMFF042P07+           AAGGGTGGCGACTGG                                             
JMFF027P09+           AAGGGTGGCGACTGG                                             
JMFF011N22+           AAGGGTGGCGACTGG                                             
JMFF014L10+           AAGGGTGGCGACT                                               
JMFF038J07+           AAGGGTGGCGACTGG                                             
JMFF041J04+           AAGGGTGGCGACTGGCGACGTTAAGGGAGATCGGGTTTTGGGGAGGTTGAAGCGAGAGTG
                      ____________________________________________________________
consensus             AAGGGTGGCGACTGGCGACGTTAAGGGAGATCGGGTTTTGGGGAGGTTGAAGCGAGAGTG
 
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JMFF041J04+           TAGACTGAGCAGTGATTCTCAGTTGGTACGTCCACCTGAAGATAATGGAGCCACACCGGT
                      ____________________________________________________________
consensus             TAGACTGAGCAGTGATTCTCAGTTGGTACGTCCACCTGAAGATAATGGAGCCACACCGGT