Contig 007453:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003M01Sequence275007453 (4)ref|XP_006343987.1|5e-04PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]741005491 (5)emb|CDP09740.1|2e-81unnamed protein product [Coffea canephora]
JMFF004P16Sequence515007453 (4)ref|XP_006343987.1|1e-54PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]737005491 (5)emb|CDP09740.1|4e-87unnamed protein product [Coffea canephora]
JMFF021L17Sequence539007453 (4)ref|XP_006343987.1|3e-60PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]748005491 (5)emb|CDP09740.1|3e-82unnamed protein product [Coffea canephora]
JMFF041I07Sequence592007453 (4)ref|XP_006343987.1|8e-73PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]471005491 (5)gb|AFF18843.1|1e-25gamma-glutamylcysteine synthetase, partial [Dimocarpus longan]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF021L17+ TTT
JMFF041I07+ AAGCTCAAATTGACCACCAGGCTCCAACGATATACTTTGCTTTCCCTGTTTT
                      ____________________________________________________________
consensus AAGCTCAAATTGACCACCAGGCTCCAACGATATACTTTGCTTTCCCTGTTTT
 
. : . : . : . : . : . :
JMFF021L17+ AGCCCAATAATTTTGTCACCTTCCATTATTTTATCCCAATCAAATCTCTCAGAAATGCCA
JMFF004P16+ TCCATTATTTTATCCCAATCAAATCTCTCAGAAATGCCA
JMFF041I07+ AGCCCAATAATTTTGTCACCTTCCATTATTTTATCCCAATCAAATCTCTCAGAAATGCCA
                      ____________________________________________________________
consensus AGCCCAATAATTTTGTCACCTTCCATTATTTTATCCCAATCAAATCTCTCAGAAATGCCA
 
. : . : . : . : . : . :
JMFF021L17+ TTAAGCAACTCAGCTATTTGTTCATACTTCATAGGCCGCAGAGTCTCAAACTCAAAACCA
JMFF004P16+ TTAAGCAACTCAGCTATTTGTTCATACTTCATAGGCCGCAGAGTCTCAAACTCAAAACCA
JMFF041I07+ TTAAGCAACTCAGCTATTTGTTCATACTTCATAGGCCGCAGAGTCTCAAACTCAAAACCA
                      ____________________________________________________________
consensus TTAAGCAACTCAGCTATTTGTTCATACTTCATAGGCCGCAGAGTCTCAAACTCAAAACCA
 
. : . : . : . : . : . :
JMFF021L17+ AACTTTTCATGCTCTGTACCTATCCTCCATTTTTCTTTTGTCTTGCATCCAGAAGCAAGA
JMFF004P16+ AACTTTTCATGCTCTGTACCTATCCTCCATTTTTCTTTTGTCTTGCATCCAGAAGCAAGA
JMFF041I07+ AACTTTTCATGCTCTGTACCTATCCTCCATTTTTCTTTTGTCTTGCATCCAGAAGCAAGA
                      ____________________________________________________________
consensus AACTTTTCATGCTCTGTACCTATCCTCCATTTTTCTTTTGTCTTGCATCCAGAAGCAAGA
 
. : . : . : . : . : . :
JMFF021L17+ TATCCAACGAGGTCTTCTTTCGTTAACGGCTCTGCAGCAGTAACAACATCCTCCGTTGGA
JMFF004P16+ TATCCAACGAGGTCTTCTTTCGTTAACGGCTCTGCAGCAGTAACAACATCCTCCGTTGGA
JMFF041I07+ TATCCAACGAGGTCTTCTTTCGTTAACGGCTCTGCAGCAGTAACAACATCCTCCGTTGGA
                      ____________________________________________________________
consensus TATCCAACGAGGTCTTCTTTCGTTAACGGCTCTGCAGCAGTAACAACATCCTCCGTTGGA
 
. : . : . : . : . : . :
JMFF021L17+ GGACTTGCAGCAACAGTCAACCCCCCGTGTCCTCGTCTAGATTCCAAACGCAACCCTTGC
JMFF003M01+ CCGTGTCNTCGTNTAGATTCCAAACGCAACCCTTGC
JMFF004P16+ GGACTTGCAGCAACAGTCAACCCCCCGTGTCCTCGTCTAGATTCCAAACGCAACCCTTGC
JMFF041I07+ GGACTTGCAGCAACAGTCAACCCCCCGTGTCCTCGTCTAGATTCCAAACGCAACCCTTGC
                      ____________________________________________________________
consensus GGACTTGCAGCAACAGTCAACCCCCCGTGTCCTCGTCTAGATTCCAAACGCAACCCTTGC
 
. : . : . : . : . : . :
JMFF021L17+ ATACCCTTTGATGAACTCCGCGAAGAGGAAGAGAAACCAAAACCAATTTCATTCCTTTTG
JMFF003M01+ ATACCCTTTGATGAACTCCGCGAAGAGGAAGAGAAACCAAAACCAATTTCATTCCTTTTG
JMFF004P16+ ATACCCTTTGATGAACTCCGCGAAGAGGAAGAGAAACCAAAACCAATTTCATTCCTTTTG
JMFF041I07+ ATACCCTTTGATGAACTCCGCGAAGAGGAAGAGAAACCAAAACCAATTTCATTCCTTTTG
                      ____________________________________________________________
consensus ATACCCTTTGATGAACTCCGCGAAGAGGAAGAGAAACCAAAACCAATTTCATTCCTTTTG
 
. : . : . : . : . : . :
JMFF021L17+ AACATCTCCATACTGTTCACAACACCTTTACATTTTACCACTTCTGAATGCATGCCATAT
JMFF003M01+ AACATCTCCATACTGTTCACAACACCTTTACATTTTACCACTTCTGAATGCATGCCATAT
JMFF004P16+ AACATCTCCATACTGTTCACAACACCTTTACATTTTACCACTTCTGAATGCATGCCATAT
JMFF041I07+ AACATCTCCATACTGTTCACAACACCTTTACATTTTACCACTTCTGAATGCATGCCATAT
                      ____________________________________________________________
consensus AACATCTCCATACTGTTCACAACACCTTTACATTTTACCACTTCTGAATGCATGCCATAT
 
. : . : . : . : . : . :
JMFF021L17+ GATGGCCCAGACTGGGACATCAACGCCATGCTTTTTGCCTGGATTGAGCAAGCAGAGAGC
JMFF003M01+ GATGGCCCAGACTGGGACATCAACGCCATGCTTTTTGCCTGGATTGAGCAAGCAGAGAGC
JMFF004P16+ GATGGCCCAGACTGGGACATCAACGCCATGCTTTTTGCCTGGATTGAGCAAGCAGAGAGC
JMFF041I07+ GATGGCCCAGACTGGGACATCAACGCCATGCTTTTTGCCTGGATTGAGCAAGCAGAGAGC
                      ____________________________________________________________
consensus GATGGCCCAGACTGGGACATCAACGCCATGCTTTTTGCCTGGATTGAGCAAGCAGAGAGC
 
. : . : . : . : . : . :
JMFF021L17+ AAGAATTCTAGGGTCTGCGAGAAATTGAGAGATAAATGGTGTGGAGGGAGTAGTAG
JMFF003M01+ AAGAATTCTAGGGTCTGCGAGAAATTGAGAGATAAATGGTGTGGAGGGAGTAGTAG
JMFF004P16+ AAGAATTCTAGGGTCTGCGAGAAATTGAGAGATAAATGGTGTGGAGGGAGTAGTAG
JMFF041I07+ AAGAATTCTAGGGTCTGCGAGAAATTGAGAGATAAATGGTGTGGAGGGAGTAGTAGTCGG
                      ____________________________________________________________
consensus AAGAATTCTAGGGTCTGCGAGAAATTGAGAGATAAATGGTGTGGAGGGAGTAGTAGTCGG