| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012L06 | Sequence | 525 | 007451 (4) | ref|XP_009786792.1| | 2e-31 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 757 | 009761 (5) | ref|XP_004232109.1| | 2e-80 | PREDICTED: xyloglucan glycosyltransferase 4 [Solanum lycopersicum] |
| JMFF036A09 | Sequence | 386 | 007451 (4) | ref|XP_009786792.1| | 6e-10 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 734 | 009761 (5) | ref|XP_006338294.1| | 4e-76 | PREDICTED: xyloglucan glycosyltransferase 4-like [Solanum tuberosum] |
| JMFF041C14 | Sequence | 639 | 007451 (4) | ref|XP_009786792.1| | 3e-41 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 603 | 009761 (5) | ref|XP_006338294.1| | 6e-43 | PREDICTED: xyloglucan glycosyltransferase 4-like [Solanum tuberosum] |
| JMFS092D10 | Sequence | 601 | 007451 (4) | ref|XP_009786792.1| | 2e-37 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS092D10+ TAATGAACCTGTACAACTT
JMFF041C14+ AGAAACAGCAAGAAAGCCTCTAATGAACCTGTACAACTT
____________________________________________________________
consensus AGAAACAGCAAGAAAGCCTCTAATGAACCTGTACAACTT
. : . : . : . : . : . :
JMFS092D10+ CCCTCTATACCTGGGATCTTCTTCATCTGTATCAGACAAGGCAATGCGTTTCTTGACAGA
JMFF012L06+ CTGGGATCTTCTTCATCTGTATCAGACAAGGCAATGCGTTTCTTGACAGA
JMFF041C14+ CCCTCTATACCTGGGATCTTCTTCATCTGTATCAGACAAGGCAATGCGTTTCTTGACAGA
____________________________________________________________
consensus CCCTCTATACCTGGGATCTTCTTCATCTGTATCAGACAAGGCAATGCGTTTCTTGACAGA
. : . : . : . : . : . :
JMFS092D10+ AGAAAATGTTGTGAGCAAACCAGTGGCCAGCCATGGAAGGCAAGCTAGAGCTCTGTGGGC
JMFF012L06+ AGAAAATGTTGTGAGCAAACCAGTGGCCAGCCATGGAAGGCAAGCTAGAGCTCTGTGGGC
JMFF041C14+ AGAAAATGTTGTGAGCAAACCAGTGGCCAGCCATGGAAGGCAAGCTAGAGCTCTGTGGGC
____________________________________________________________
consensus AGAAAATGTTGTGAGCAAACCAGTGGCCAGCCATGGAAGGCAAGCTAGAGCTCTGTGGGC
. : . : . : . : . : . :
JMFS092D10+ TTTGAGAATAAGGAATGTCTTTGGGTTTGTAGCCTTCTGTTTATCCCGAAAGGCGGGCGA
JMFF036A09+ TAGCCTTCTGTTTATCCCGAAAGGCGGGCGA
JMFF012L06+ TTTGAGAATAAGGAATGTCTTTGGGTTTGTAGCCTTCTGTTTATCCCGAAAGGCGGGCGA
JMFF041C14+ TTTGAGAATAAGGAATGTCTTTGGGTTTGTAGCCTTCTGTTTATCCCGAAAGGCGGGCGA
____________________________________________________________
consensus TTTGAGAATAAGGAATGTCTTTGGGTTTGTAGCCTTCTGTTTATCCCGAAAGGCGGGCGA
. : . : . : . : . : . :
JMFS092D10+ ATTCGAATCGTTGATCTCCACCAGGGAAATGCTCTTGGAGTTCTCAATAGTCACCACTAC
JMFF036A09+ ATTCGAATCGTTGATCTCCACCAGGGAAATGCTCTTGGAGTTCTCAATAGTCACCACTAC
JMFF012L06+ ATTCGAATCGTTGATCTCCACCAGGGAAATGCTCTTGGAGTTCTCAATAGTCACCACTAC
JMFF041C14+ ATTCGAATCGTTGATCTCCACCAGGGAAATGCTCTTGGAGTTCTCAATAGTCACCACTAC
____________________________________________________________
consensus ATTCGAATCGTTGATCTCCACCAGGGAAATGCTCTTGGAGTTCTCAATAGTCACCACTAC
. : . : . : . : . : . :
JMFS092D10+ AGAGCTTGGTGCCATTCCTCTTCTGAACACACAATCAAAACCCAAAGGGATCAATGGCAG
JMFF036A09+ AGAGCTTGGTGCCATTCCTCTTCTGAACACACAATCAAAACCCAAAGGGATCAATGGCAG
JMFF012L06+ AGAGCTTGGTGCCATTCCTCTTCTGAACACACAATCAAAACCCAAAGGGATCAATGGCAG
JMFF041C14+ AGAGCTTGGTGCCATTCCTCTTCTGAACACACAATCAAAACCCAAAGGGATCAATGGCAG
____________________________________________________________
consensus AGAGCTTGGTGCCATTCCTCTTCTGAACACACAATCAAAACCCAAAGGGATCAATGGCAG
. : . : . : . : . : . :
JMFS092D10+ CCCAGATTTGGGATTTTCACAAAGATGCAAACTTTGTGGACCTCAGAGCTCAGTTATGAC
JMFF036A09+ CCCAGATTTGGGATTTTCACAAAGATGCAAACTTTGTGGACCTCAGAGCTCAGTTATGAC
JMFF012L06+ CCCAGATTTGGGATTTTCACAAAGATGCAAACTTTGTGGACCTCAGAGCTCAGTTATGAC
JMFF041C14+ CCCAGATTTGGGATTTTCACAAAGATGCAAACTTTGTGGACCTCAGAGCTCAGTTATGAC
____________________________________________________________
consensus CCCAGATTTGGGATTTTCACAAAGATGCAAACTTTGTGGACCTCAGAGCTCAGTTATGAC
. : . : . : . : . : . :
JMFS092D10+ ACTTCCACAGCTCCTCTGTCACACCACAAACAAAATCATTGGATAGTTATAACTGCACTC
JMFF036A09+ ACTTCCACAGCTCCTCTGTCACACCACAAACAAAATCATTGGATAGTTATAACTGCACTC
JMFF012L06+ ACTTCCACAGCTCCTCTGTCACACCACAAACAAAATCATTGGATAGTTATAACTGCACTC
JMFF041C14+ ACTTCCACAGCTCCTCTGTCACACCACAAACAAAATCATTGGATAGTTATAACTGCACTC
____________________________________________________________
consensus ACTTCCACAGCTCCTCTGTCACACCACAAACAAAATCATTGGATAGTTATAACTGCACTC
. : . : . : . : . : . :
JMFS092D10+ ATTTCAAGAAAATATGGATCTTGAACCTGAAAAGAATGGCAATAGGCTCTTGGCTCAACA
JMFF036A09+ ATTTCAAGAAAATATGGATCTTGAACCTGAAAAGAATGGCAATAGGCTCTTGGCTCAACA
JMFF012L06+ ATTTCAAGAAAATATGGATCTTGAACCTGAAAAGAATGGCAATAGGCTCTTGGCTCAACA
JMFF041C14+ ATTTCAAGAAAATATGGATCTTGAACCTGAAAAGAATGGCAATAGGCTCTTGGCTCAACA
____________________________________________________________
consensus ATTTCAAGAAAATATGGATCTTGAACCTGAAAAGAATGGCAATAGGCTCTTGGCTCAACA
. : . : . : . : . : . :
JMFS092D10+ ATTCTCCAGGTCAAATCTAGAAAGAAAAACAGAGAGAGATAGAGAGAGG
JMFF036A09+ ATTCTCCAGGTCAAATCTAGAAAGAAAAACAGAGAGAGATAGAGAGAGG
JMFF012L06+ ATTCTCCAGGTCAAATCTAGAAAGAAAAACAGAGAGAGATAGAGAGAGG
JMFF041C14+ ATTCTCCAGGTCAAATCTAGAAAGAAAAACAGAGAGAGATAGAGAGAGGXXXXXXXXXXX
____________________________________________________________
consensus ATTCTCCAGGTCAAATCTAGAAAGAAAAACAGAGAGAGATAGAGAGAGGNNNNNNNNNNN
. : . : . : . : . : . :
JMFF041C14+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAGAATCTGGTTCTGTAATTAAAT
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAGAATCTGGTTCTGTAATTAAAT