Contig 007450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035G20Sequence575007450 (4)ref|XP_011099633.1|6e-44PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]637002655 (4)ref|XP_004232417.1|8e-61PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum] ref|XP_010316378.1|
JMFF040H16Sequence535007450 (4)ref|XP_011099633.1|1e-25PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]688002655 (4)ref|XP_004232417.1|3e-65PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum] ref|XP_010316378.1|
JMFF041I02Sequence639007450 (4)ref|XP_011099633.1|3e-58PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]615002655 (4)ref|NP_001266362.1|5e-55uncharacterized protein LOC101202709 [Zea mays] gb|ACF80993.1| unknown [Zea mays
JMSF024L18Sequence643007450 (4)ref|XP_011099633.1|8e-51PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]765002655 (4)ref|XP_009779244.1|2e-91PREDICTED: tubby-like F-box protein 5 [Nicotiana sylvestris] ref|XP_009779245.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041I02+ GAAATGGGAAAGG
                      ____________________________________________________________
consensus GAAATGGGAAAGG
 
. : . : . : . : . : . :
JMFF041I02+ TTAGCCTCCCGCATTCCTCGGGAGTCTTGACAATGGCCTTAGTGATCTCCCTCCACGACT
JMFF035G20+ TCCACGACT
JMSF024L18+ CTCGGGAGTCTTGACAATGGCCTTAGTGATCTCCCTCCACGACT
                      ____________________________________________________________
consensus TTAGCCTCCCGCATTCCTCGGGAGTCTTGACAATGGCCTTAGTGATCTCCCTCCACGACT
 
. : . : . : . : . : . :
JMFF041I02+ TACAAACCGATGCACAAAACAGAACCACAGTCCGGGCAGGCCATGATGTCTCGCTCTCTT
JMFF035G20+ TACAAACCGATGCACAAAACAGAACCACAGTCCGGGCAGGCCATGATGTCTCGCTCTCTT
JMSF024L18+ TACAAACCGATGCACAAAACAGAACCACAGTCCGGGCAGGCCATGATGTCTCGCTCTCTT
                      ____________________________________________________________
consensus TACAAACCGATGCACAAAACAGAACCACAGTCCGGGCAGGCCATGATGTCTCGCTCTCTT
 
. : . : . : . : . : . :
JMFF041I02+ CAACTCTCTGGATTATATCCAACAGCAATTCGGGCGGTAGATTTGCCCACCGCCCCTGCT
JMFF035G20+ CAACTCTCTGGATTATATCCAACAGCAATTCGGGCGGTAGATTTGCCCACCGCCCCTGCT
JMSF024L18+ CAACTCTCTGGATTATATCCAACAGCAATTCGGGCGGTAGATTTGCCCACCGCCCCTGCT
JMFF040H16+ CTCTGGATTNTATCCAACAGCAATTCGGGCGGTAGATTTGCCCACCGCCCCTGCT
                      ____________________________________________________________
consensus CAACTCTCTGGATTATATCCAACAGCAATTCGGGCGGTAGATTTGCCCACCGCCCCTGCT
 
. : . : . : . : . : . :
JMFF041I02+ CAATTGGATCAGAATGAGCCAAATCGGGAGCTATATGTGATAGCGTCCTACTCCGCCGCC
JMFF035G20+ CAATTGGATCAGAATGAGCCAAATCGGGAGCTATATGTGATAGCGTCCTACTCCGCCGCC
JMSF024L18+ CAATTGGATCAGAATGAGCCAAATCGGGAGCTATATGTGATAGCGTCCTACTCCGCCGCC
JMFF040H16+ CAATTGGATCAGAATGAGCCAAATCGGGAGCTATATGTGATAGCGTCCTACTCCGCCGCC
                      ____________________________________________________________
consensus CAATTGGATCAGAATGAGCCAAATCGGGAGCTATATGTGATAGCGTCCTACTCCGCCGCC
 
. : . : . : . : . : . :
JMFF041I02+ ATTGCCTCCCTTCCAACCCTCTCCTCGACATGCTCCCTATCCCGTCTTTCATCTCCCTCA
JMFF035G20+ ATTGCCTCCCTTCCAACCCTCTCCTCGACATGCTCCCTATCCCGTCTTTCATCTCCCTCA
JMSF024L18+ ATTGCCTCCCTTCCAACCCTCTCCTCGACATGCTCCCTATCCCGTCTTTCATCTCCCTCA
JMFF040H16+ ATTGCCTCCCTTCCAACCCTCTCCTCGACATGCTCCCTATCCCGTCTTTCATCTCCCTCA
                      ____________________________________________________________
consensus ATTGCCTCCCTTCCAACCCTCTCCTCGACATGCTCCCTATCCCGTCTTTCATCTCCCTCA
 
. : . : . : . : . : . :
JMFF041I02+ GCTCGCGCACAATGCTCTTGAACGACATCCCGACTGATCATACCAATCGGGCAATCAAAA
JMFF035G20+ GCTCGCGCACAATGCTCTTGAACGACATCCCGACTGATCATACCAATCGGGCAATCAAAA
JMSF024L18+ GCTCGCGCACAATGCTCTTGAACGACATCCCGACTGATCATACCAATCGGGCAATCAAAA
JMFF040H16+ GCTCGCGCACAATGCTCTTGAACGACATCCCGACTGATCATACCAATCGGGCAATCAAAA
                      ____________________________________________________________
consensus GCTCGCGCACAATGCTCTTGAACGACATCCCGACTGATCATACCAATCGGGCAATCAAAA
 
. : . : . : . : . : . :
JMFF041I02+ CCTGAGCTAAGAAGATGCAGAGATCGGTGAGAAAACAAAATAGATCGAACAGGCCATTGC
JMFF035G20+ CCTGAGCTAAGAAGATGCAGAGATCGGTGAGAAAACAAAATAGATCGAACAGGCCATTGC
JMSF024L18+ CCTGAGCTAAGAAGATGCAGAGATCGGTGAGAAAACAAAATAGATCGAACAGGCCATTGC
JMFF040H16+ CCTGAGCTAAGAAGATGCAGAGATCGGTGAGAAAACAAAATAGATCGAACAGGCCATTGC
                      ____________________________________________________________
consensus CCTGAGCTAAGAAGATGCAGAGATCGGTGAGAAAACAAAATAGATCGAACAGGCCATTGC
 
. : . : . : . : . : . :
JMFF041I02+ AGACCGTGTCCTCCCCCACTGACTTGATTACTTGACCCGGCTTCACATTAATCTCTTGGT
JMFF035G20+ AGACCGTGTCCTCCCCCACTGACTTGATTACTTGACCCGGCTTCACATTAATCTCTTGGT
JMSF024L18+ AGACCGTGTCCTCCCCCACTGACTTGATTACTTGACCCGGCTTCACATTAATCTCTTGGT
JMFF040H16+ AGACCGTGTCCTCCCCCACTGACTTGATTACTTGACCCGGCTTCACATTAATCTCTTGGT
                      ____________________________________________________________
consensus AGACCGTGTCCTCCCCCACTGACTTGATTACTTGACCCGGCTTCACATTAATCTCTTGGT
 
. : . : . : . : . : . :
JMFF041I02+ GGTCGGATTTCACATTGCCGGAACTTACCAGCGCTGCCGCCACCAACGCCGCCGTCTCCT
JMFF035G20+ GGTCGGATTTCACATTGCCGGAACTTACCAGCGCTGCCGCCACCAACGCCGCCGTCTCCT
JMSF024L18+ GGTCGGATTTCACATTGCCGGAACTTACCAGCGCTGCCGCCACCAACGCCGCCGTCTCCT
JMFF040H16+ GGTCGGATTTCACATTGCCGGAACTTACCAGCGCTGCCGCCACCAACGCCGCCGTCTCCT
                      ____________________________________________________________
consensus GGTCGGATTTCACATTGCCGGAACTTACCAGCGCTGCCGCCACCAACGCCGCCGTCTCCT
 
. : . : . : . : . : . :
JMFF041I02+ CCTTCGCCGTCTGGAAAAAGGTGAAAGCAGAGGTCACGCCACGAGCTGAAAGATAAACAA
JMFF035G20+ CCTTCGCCGTCTGGAAAAAGGTGAAAGCAGAGGTCACGCCACGAGCTGAAAGATAAACAA
JMSF024L18+ CCTTCGCCGTCTGGAAAAAGGTGAAAGCAGAGGTCACGCCACGAGCTGAAAGATAAACAA
JMFF040H16+ CCTTCGCCGTCTGGAAAAAGGTGAAAGCAGAGGTCACGCCACGAGCTGAAAGATAAACAA
                      ____________________________________________________________
consensus CCTTCGCCGTCTGGAAAAAGGTGAAAGCAGAGGTCACGCCACGAGCTGAAAGATAAACAA
 
. : . : . : . : . : . :
JMFF041I02+ AGCCACCCTCTCTGTCTATCTCTAAT
JMFF035G20+ AGCCACCCTCTCTGTCTATCTCTAAT
JMSF024L18+ AGCCACCCTCTCTGTCTATCTCTAATGGCACCAAACAAAAATTTAGCAAGACTTCAAG
JMFF040H16+ AGCCACCCTCTCTGTCTATCTCTAATGGCACCAAACAAAAATTTAGCAAGACTTCAAGAC
                      ____________________________________________________________
consensus AGCCACCCTCTCTGTCTATCTCTAATGGCACCAAACAAAAATTTAGCAAGACTTCAAGAC