Contig 007448:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040C07Sequence403007448 (2)ref|XP_010241850.1|8e-18PREDICTED: uncharacterized protein LOC104586348 isoform X2 [Nelumbo nucifera]700019151gb|ADV02783.1|2e-85unknown protein, partial [Ipomoea batatas]
JMSF027L11Sequence685007448 (2)ref|XP_009619194.1|6e-64PREDICTED: uncharacterized protein LOC104111167 isoform X2 [Nicotiana tomentosi802015059emb|CDP07070.1|4e-36unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF027L11+                                                         TGCAGACAAAGTAG
                      ____________________________________________________________
consensus                                                           TGCAGACAAAGTAG
 
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JMSF027L11+           ATTTACCGCAGCCACTTGTTCCACAAAGGAGTACAGTAATAGATTCCTTTCTTTCTCGGA
                      ____________________________________________________________
consensus             ATTTACCGCAGCCACTTGTTCCACAAAGGAGTACAGTAATAGATTCCTTTCTTTCTCGGA
 
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JMSF027L11+           TTCTGCAAGCTAAAGTTAGATCAGCCCTCTGATTTGGGCCAACATACTTGTATTCTGTGA
                      ____________________________________________________________
consensus             TTCTGCAAGCTAAAGTTAGATCAGCCCTCTGATTTGGGCCAACATACTTGTATTCTGTGA
 
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JMSF027L11+           GAGCATCACAAATAACATCTAGAAAAGTTTTTCTTCTGACAACAACAGTTGTGCGCCTTT
                      ____________________________________________________________
consensus             GAGCATCACAAATAACATCTAGAAAAGTTTTTCTTCTGACAACAACAGTTGTGCGCCTTT
 
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JMSF027L11+           TATACAATTCAAATGGTTCGCTTTTAGCTCCATCATTTGCTCTATCCAAGCATGCACTAA
                      ____________________________________________________________
consensus             TATACAATTCAAATGGTTCGCTTTTAGCTCCATCATTTGCTCTATCCAAGCATGCACTAA
 
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JMSF027L11+           TATTATTATGATAGTCCTCTTCCTGAAGTTGATTTAAGGTATCCTGCTCTGATTTGTATG
                      ____________________________________________________________
consensus             TATTATTATGATAGTCCTCTTCCTGAAGTTGATTTAAGGTATCCTGCTCTGATTTGTATG
 
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JMSF027L11+           CACACACTGAAACCAAACTGTCACTTGTGGACTTGTTTCTCATCTTCTCCAAAACCCTTT
JMFF040C07+                                              TTTCTAATCTTCTCGAACACCCTTC
                      ____________________________________________________________
consensus             CACACACTGAAACCAAACTGTCACTTGTGGACTTGTTTCTCATCTTCTCGAACACCCTTT
 
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JMSF027L11+           GGCTAATCTTAAAGGCATGTCTCGGTTTGCACCCCATGAGCTGCAGAGTACTCTGCAGAA
JMFF040C07+           GGCTGATCTTAAACGCGTGTCTGGATTTGCATCCCATGAGCTGCAGAGTACTCTGCAGAA
                      ____________________________________________________________
consensus             GGCTGATCTTAAAGGCGTGTCTGGGTTTGCATCCCATGAGCTGCAGAGTACTCTGCAGAA
 
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JMSF027L11+           CCGAACG                                                     
JMFF040C07+           CCGAACGAGTATATCGAAAGGCGTCCTTATCTTTCTCTCTAATTTTTTCAATATCAGTCT
                      ____________________________________________________________
consensus             CCGAACGAGTATATCGAAAGGCGTCCTTATCTTTCTCTCTAATTTTTTCAATATCAGTCT
 
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JMFF040C07+           CTTTGCTTCCCTCCCTCCTCCCCTCCTCTCCGTCTACCACCAGTATGTACAACAGCTTCG
                      ____________________________________________________________
consensus             CTTTGCTTCCCTCCCTCCTCCCCTCCTCTCCGTCTACCACCAGTATGTACAACAGCTTCG
 
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JMFF040C07+           TCACCTCCACCGCCATTCTGAGGAACGGTACGTGATTCTTAAGACAGGAATCCGATATGC
                      ____________________________________________________________
consensus             TCACCTCCACCGCCATTCTGAGGAACGGTACGTGATTCTTAAGACAGGAATCCGATATGC
 
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JMFF040C07+           TAGGGTTTACAAAGAGGAGCGGAGCGACACGAAAGAAACGAAGAGAGGAGAGGTTTGACA
                      ____________________________________________________________
consensus             TAGGGTTTACAAAGAGGAGCGGAGCGACACGAAAGAAACGAAGAGAGGAGAGGTTTGACA
 
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JMFF040C07+           GGAGATCGTCATGTCCAGTCTCTGCTTCCACGCATGATCATAGTCGGAGTGCCTCCAGCT
                      ____________________________________________________________
consensus             GGAGATCGTCATGTCCAGTCTCTGCTTCCACGCATGATCATAGTCGGAGTGCCTCCAGCT