| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF039G18 | Sequence | 564 | 007446 (7) | ref|XP_009801898.1| | 5e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest | 605 | 007446 (7) | ref|XP_009801898.1| | 8e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest |
| JMFF043K20 | Sequence | 626 | 007446 (7) | ref|XP_009801898.1| | 5e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest | 578 | 007446 (7) | ref|XP_009801898.1| | 3e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest |
| JMFN003N15 | Sequence | 368 | 007446 (7) | ref|XP_010262447.1| | 1e-20 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nelumbo nucifera] | |||||
| JMFN015H13 | Sequence | 593 | 007446 (7) | ref|XP_009801898.1| | 5e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest | |||||
| JMFN033K05 | Sequence | 500 | 007446 (7) | ref|XP_009801898.1| | 2e-43 | PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF043K20- ACAAAAAAGGGGGAGAAATGCAAACTTTT
JMFN015H13+ AATGCAAACTTTT
JMFN003N15- AATGCAAACTTTT
JMFF043K20+ TTAACAAAAAAGGGGGAGAAATGCAAACTTTT
____________________________________________________________
consensus TTAACAAAAAAGGGGGAGAAATGCAAACTTTT
. : . : . : . : . : . :
rJMFF043K20- GCAATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
JMFN015H13+ GCAATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
JMFN003N15- GCAATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
JMFF043K20+ GCAATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
rJMFF039G18- ATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
JMFF039G18+ ATTATAAATTAGCTGAGAAGAAGT
____________________________________________________________
consensus GCAATAACTGATATAGAAATCCGACTGATTGTTAACATTATAAATTAGCTGAGAAGAAGT
. : . : . : . : . : . :
rJMFF043K20- AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
JMFN033K05+ AACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
JMFN015H13+ AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
JMFN003N15- AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
JMFF043K20+ AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
rJMFF039G18- AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
JMFF039G18+ AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
____________________________________________________________
consensus AAGCATAACTTCAAAAATTCTATCAAGTCTAATTATTCCGCAATTCCACATAAAATAGAA
. : . : . : . : . : . :
rJMFF043K20- CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAA---GGAAAACGGAAATCGC
JMFN033K05+ CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
JMFN015H13+ CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
JMFN003N15- CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
JMFF043K20+ CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAA---GGAAAACGGAAATCGC
rJMFF039G18- CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
JMFF039G18+ CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
____________________________________________________________
consensus CCCTAATGCTACAAATTGACCACCACGAGATCATAAACAAAGTTGGAAAACGGAAATCGC
. : . : . : . : . : . :
rJMFF043K20- GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
JMFN033K05+ GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
JMFN015H13+ GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
JMFN003N15- GACTCATCACTTGGGTGCACCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
JMFF043K20+ GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
rJMFF039G18- GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
JMFF039G18+ GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
____________________________________________________________
consensus GACTCATCACTTGGGTGCAGCGATTCCGGGAGGAGGGGTACCGAGCAAGCTAGCCTGTTG
. : . : . : . : . : . :
rJMFF043K20- CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
JMFN033K05+ CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
JMFN015H13+ CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
JMFN003N15- CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACCACGAG
JMFF043K20+ CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
rJMFF039G18- CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
JMFF039G18+ CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
____________________________________________________________
consensus CATCTCGAGCTCGTTAAGTTGGGCCTCGCGGTCCATCTCGATGATGAGAGGTACGACGAG
. : . : . : . : . : . :
rJMFF043K20- GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
JMFN033K05+ GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
JMFN015H13+ GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
JMFN003N15- GATAAGGAAGGGGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGA
JMFF043K20+ GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
rJMFF039G18- GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
JMFF039G18+ GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
____________________________________________________________
consensus GATAAGGAAGGTGGTGCCGGCAATCCAGGCGGCCTTTCCGGTGCTCTTGAGGAGCTTTTT
. : . : . : . : . : . :
rJMFF043K20- GCCCACGTCAGCGGCCTCCGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
JMFN033K05+ GCCCACGTCAGCGGCCTCCGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
JMFN015H13+ GCCCACGTCAGCGGCCTCCGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
JMFF043K20+ GCCCACGTCAGCGGCCTCCGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
rJMFF039G18- GCCCACGTCAGCGGCCTCTGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
JMFF039G18+ GCCCACGTCAGCGGCCTCTGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
____________________________________________________________
consensus GCCCACGTCAGCGGCCTCCGAAGCGGCTCGCTTGCCGCGGTACACTATCGGCGATTGATT
. : . : . : . : . : . :
rJMFF043K20- CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
JMFN033K05+ CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
JMFN015H13+ CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
JMFF043K20+ CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
rJMFF039G18- CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
JMFF039G18+ CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
____________________________________________________________
consensus CAAGGATGACGAAACCCTAGACAAAATTCCTTTGCTGCCTCCGCTGCCTGGCCGCTCCGG
. : . : . : . : . : . :
rJMFF043K20- CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
JMFN033K05+ CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
JMFN015H13+ CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
JMFF043K20+ CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
rJMFF039G18- CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
JMFF039G18+ CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
____________________________________________________________
consensus CAACGAAACTCCGCCTCTCTTGGACGACATCGTGAAAGTACACAGACGAGAATGCGATGC
. : . : . : . : . : . :
rJMFF043K20- GCTCAGCACAGA
JMFN033K05+ GCTCAGCACAGACAAGAGAGGGGAAA
JMFN015H13+ GCTCAGCACAGACAAGAGAGGGGAAACTGATTCCAAGCGG
JMFF043K20+ GCTCAGCACAGACAAGTGAGGGGAAACTGATTCCAAGCGGTAAGGACTCTCGGA
rJMFF039G18- GCTCAGCACAGACAAGAGAGGGGAAACTGATTCCAAGCGGTAAGGACTCTCGGA
JMFF039G18+ GCTCAGCACAGACAAGAGAGGGGAAACTGATTCCAAGCGGTAAGGACTCTCGGAATCCAA
____________________________________________________________
consensus GCTCAGCACAGACAAGAGAGGGGAAACTGATTCCAAGCGGTAAGGACTCTCGGAATCCAA