| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF039F22 | Sequence | 581 | 007445 (5) | ref|XP_007220014.1| | 5e-54 | hypothetical protein PRUPE_ppa010476mg [Prunus persica] gb|EMJ21213.1| hypotheti | 710 | 007445 (5) | ref|XP_009629932.1| | 214 | PREDICTED: uncharacterized protein LOC104119992 [Nicotiana tomentosiformis] |
| JMFF039F24 | Sequence | 501 | 007445 (5) | gb|KCW88599.1| | 4e-55 | hypothetical protein EUGRSUZ_A00975, partial [Eucalyptus grandis] | 623 | 007445 (5) | ref|XP_009629932.1| | 191 | PREDICTED: uncharacterized protein LOC104119992 [Nicotiana tomentosiformis] |
| JMFN010J01 | Sequence | 625 | 007445 (5) | ref|XP_009629932.1| | 246 | PREDICTED: uncharacterized protein LOC104119992 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF039F22- CTTATGATAACATAGAT
____________________________________________________________
consensus CTTATGATAACATAGAT
. : . : . : . : . : . :
rJMFF039F24- ATAATANGACTGGATTCAACTAAGATTGAATCCCACGGCGTTTTTCNTAAAAT
rJMFF039F22- TAATTAAATAATAAGACTGGATTCAACTAAGATTGAATCCCACGGCGTTTTTCATAAAAT
____________________________________________________________
consensus TAATTAAATAATAAGACTGGATTCAACTAAGATTGAATCCCACGGCGTTTTTCATAAAAT
. : . : . : . : . : . :
rJMFF039F24- CCTACAGCCACCGGTAGACTTAAAAAGTGAGTTACAGTAGTATGTTAAATTGAAGCATGT
rJMFF039F22- CCTACAGCCACCGGTAGACTTAAAAAGTGAGTTACAGTAGTATGTTAAATTGAAGCATGT
____________________________________________________________
consensus CCTACAGCCACCGGTAGACTTAAAAAGTGAGTTACAGTAGTATGTTAAATTGAAGCATGT
. : . : . : . : . : . :
rJMFF039F24- GCTCCATTTCAATTAAAAGCTTAAGTTGATAGTTGGATTGCGTTTATATATTTTATGCTC
rJMFF039F22- GCTCCATTTCAATTAAAAGCTTAAGTTGATAGTTGGATTGCGTTTATATATTTTATGCTC
JMFN010J01+ CCATTTCAATTAAAAGCTTAAGTTGATAGTTGGATTGCGTTTATATATTTTATGCTC
____________________________________________________________
consensus GCTCCATTTCAATTAAAAGCTTAAGTTGATAGTTGGATTGCGTTTATATATTTTATGCTC
. : . : . : . : . : . :
rJMFF039F24- AACAGGCCATTTAGCATTACACCAATGAATCTATAGTTACAACTTGTTCTCCACATCCTC
rJMFF039F22- AACAGGCCATTTAGCATTACACCAATGAATCTATAGTTACAACTTGTTCTCCACATCCTC
JMFN010J01+ AACAGGCCATTTAGCATTACACCAATGAATCTATAGTTACAACTTGTTCTCCACATCCTC
____________________________________________________________
consensus AACAGGCCATTTAGCATTACACCAATGAATCTATAGTTACAACTTGTTCTCCACATCCTC
. : . : . : . : . : . :
rJMFF039F24- GTCATTTGTTGTAGAAGGCACGAACCGAAACTCCACCGTAACGTCCAGAAAGTAAAGCAT
rJMFF039F22- GTCATTTGTTGTAGAAGGCACGAACCGAAACTCCACCGTAACGTCCAGAAAGTAAAGCAT
JMFN010J01+ GTCATTTGTTGTAGAAGGCACGAACCGAAACTCCACCGTAACGTCCAGAAAGTAAAGCAT
____________________________________________________________
consensus GTCATTTGTTGTAGAAGGCACGAACCGAAACTCCACCGTAACGTCCAGAAAGTAAAGCAT
. : . : . : . : . : . :
rJMFF039F24- GAAGACCAGGACGATGCAACATAAGAACATAGGAATAGGTCCAAAGATCCACAAAAAGAG
rJMFF039F22- GAAGACCAGGACGATGCAACATAAGAACATAGGAATAGGTCCAAAGATCCACAAAAAGAG
JMFN010J01+ GAAGACCAGGACGATGCAACATAAGAACATAGGAATAGGTCCAAAGATCCACAAAAAGAG
____________________________________________________________
consensus GAAGACCAGGACGATGCAACATAAGAACATAGGAATAGGTCCAAAGATCCACAAAAAGAG
. : . : . : . : . : . :
rJMFF039F24- GGGAAAAGAAAAGTAAAATGCCCTGAGCCCCAGAGACCAAAAATAGCTCCCTCTATTCAC
rJMFF039F22- GGGAAAAGAAAAGTAAAATGCCCTGAGCCCCAGAGACCAAAAATAGCTCCCTCTATTCAC
JMFN010J01+ GGGAAAAGAAAAGTAAAATGCCCTGAGCCCCAGAGACCAAAAATAGCTCCCTCTATTCAC
____________________________________________________________
consensus GGGAAAAGAAAAGTAAAATGCCCTGAGCCCCAGAGACCAAAAATAGCTCCCTCTATTCAC
. : . : . : . : . : . :
rJMFF039F24- GGTCCTCCCTACGTACTCCGACGTCACCACACACCGGTACTGGTTAGCCGGAGCTTCCCA
rJMFF039F22- GGTCCTCCCTACGTACTCCGACGTCACCACACACCGGTACTGGTTAGCCGGAGCTTCCCA
JMFN010J01+ GGTCCTCCCTACGTACTCCGACGTCACCACACACCGGTACTGGTTAGCCGGAGCTTCCCA
____________________________________________________________
consensus GGTCCTCCCTACGTACTCCGACGTCACCACACACCGGTACTGGTTAGCCGGAGCTTCCCA
. : . : . : . : . : . :
rJMFF039F24- TCCCTCCATTATTTTCCGGTAAGGAACGTTAACCAGGATGCTGGCGTGACTGTAGTACCT
rJMFF039F22- TCCCTCCATTATTTTCCGGTAAGGAACGTTAACCAGGATGCTGGCGTGACTGTAGTACCT
JMFN010J01+ TCCCTCCATTATTTTCCGGTAAGGAACGTTAACCAGGATGCTGGCGTGACTGTAGTACCT
JMFF039F22+ TAAGGAACGTTAACCAGGATGCTGGCGTGACTGTAGTACCT
____________________________________________________________
consensus TCCCTCCATTATTTTCCGGTAAGGAACGTTAACCAGGATGCTGGCGTGACTGTAGTACCT
. : . : . : . : . : . :
rJMFF039F24- TATTGACTGAACGTTGAACAGAAACGCCACCANGAAACAAACCAGTATCGAGAAGAACTT
rJMFF039F22- TATTGACTGAACGTTGAACAGAAACGCCACCAGGAAACAAACCAGTATCGAGAAGAACTT
JMFN010J01+ TATTGACTGAACGTTGAACAGAAACGCCACCAGGAAACAAACCAGTATCGAGAAGAACTT
JMFF039F22+ TATTGACTGAACGTTGAACAGAAACGCCACCAGGAAACAAACCAGTATCGAGAAGAACTT
JMFF039F24+ AAACCAGTATCGAGAAGAACTT
____________________________________________________________
consensus TATTGACTGAACGTTGAACAGAAACGCCACCAGGAAACAAACCAGTATCGAGAAGAACTT
. : . : . : . : . : . :
rJMFF039F24- TATGCATGCGCTTANACTGCTGTTGTCGCC
rJMFF039F22- TATGCATGCGCTTAGACTGCTGTTGTCGCCGAACACAAACGTCATGGAGCGGTCGTTGTT
JMFN010J01+ TATGCATGCGCTTAGACTGCTGTTGTCGCCGAACACAAACGTCATGGAGCGGTCGTTGTT
JMFF039F22+ TATGCATGCGCTTAGACTGCTGTTGTCGCCGAACACAAACGTCATGGAGCGGTCGTTGTT
JMFF039F24+ TATGCATGCGCTTAGACTGCTGTTGTCGCCGAACACAAACGTCATGGAGCGGTCGTTGTT
____________________________________________________________
consensus TATGCATGCGCTTAGACTGCTGTTGTCGCCGAACACAAACGTCATGGAGCGGTCGTTGTT
. : . : . : . : . : . :
rJMFF039F22- AAAGCCCGTCATCAAGACGGCGATGAGGGAGCT
JMFN010J01+ AAAGCCCGTCATCAAGACGGCGATGAGGGAGCTCAGCATTATCGCCGTCGACGCTAAAAG
JMFF039F22+ AAAGCCCGTCATCAAGACGGCGATGAGGGAGCTCAGCATTATCGCCGTCGACGCTAAAAG
JMFF039F24+ AAAGCCCGTCATCAAGACGGCGATGAGGGAGCTCAGCATTATCGCCGTCGACGCTAAAAG
____________________________________________________________
consensus AAAGCCCGTCATCAAGACGGCGATGAGGGAGCTCAGCATTATCGCCGTCGACGCTAAAAG
. : . : . : . : . : . :
JMFN010J01+ CGTCGACGCCATT
JMFF039F22+ CGTCGACGCCATTTATATTGTTTCTGAAAGTCTGAACTGCTAGAACCCCATTCTTCGACA
JMFF039F24+ CGTCGACGCCA-TTATATTGTTTCTGAAAGTCTGAACTGCTAGAACCCCATTCTTCGACA
____________________________________________________________
consensus CGTCGACGCCATTTATATTGTTTCTGAAAGTCTGAACTGCTAGAACCCCATTCTTCGACA
. : . : . : . : . : . :
JMFF039F22+ CATCCTCCATCATTGCGCGGACCCAGAAACGGCGGTTGATTGCATTGACGCCGATGACAG
JMFF039F24+ CATCCTCCATCATTGCGCGGACCCAGAAACGGCGGTTGATTGCATTGACGCCGATGACAG
____________________________________________________________
consensus CATCCTCCATCATTGCGCGGACCCAGAAACGGCGGTTGATTGCATTGACGCCGATGACAG
. : . : . : . : . : . :
JMFF039F22+ TGCGGTTGGGGTTATTCCTAATCTGCCACAGAAGCCATAGGTGATAAGACACCATAACTA
JMFF039F24+ TGCGGTTGGGGTTATTCCTAATCTGCCACAGAAGCCATAGGTGATAAGACACCATAACTA
____________________________________________________________
consensus TGCGGTTGGGGTTATTCCTAATCTGCCACAGAAGCCATAGGTGATAAGACACCATAACTA
. : . : . : . : . : . :
JMFF039F22+ AAAGCCCCGACGGGACTAACACGTAATCAAGAACCCGTTTTTCCATACTCCCTTTTCTTC
JMFF039F24+ AAAGCCCCGACGGGACTAACACGTAATCAAGAACCCGTTTTTCCATACTCCCTTTTCTTC
____________________________________________________________
consensus AAAGCCCCGACGGGACTAACACGTAATCAAGAACCCGTTTTTCCATACTCCCTTTTCTTC
. : . : . : . : . : . :
JMFF039F22+ TTACACAAACACACAAGAAAAAGAAATTAAATGCTATACGGAAGATCAGATCAGATGGAA
JMFF039F24+ TTACACAAACACACAAGAAAAAGAAATTAAATGCTATACGGAAGATCAGATCAGATGGAA
____________________________________________________________
consensus TTACACAAACACACAAGAAAAAGAAATTAAATGCTATACGGAAGATCAGATCAGATGGAA
. : . : . : . : . : . :
JMFF039F22+ ATTTCCAGGAGATGATATGATACTATGATAGCGGTGTAAACAAAAGAGTCCGATAGTTAC
JMFF039F24+ ATTTCCAGGAGATGATATGATACTATGATAGCGGTGTAAACAAAAGAGTCCGATAGTTAC
____________________________________________________________
consensus ATTTCCAGGAGATGATATGATACTATGATAGCGGTGTAAACAAAAGAGTCCGATAGTTAC