| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001O05 | Sequence | 108 | 007444 (11) | 784 | 008352 (13) | gb|AAX83943.1| | 3e-103 | Sgt1b [Capsicum annuum] | |||
| JMFF003L04 | Sequence | 480 | 007444 (11) | ref|XP_011076089.1| | 6e-58 | PREDICTED: protein SGT1 homolog [Sesamum indicum] | 728 | 008352 (13) | gb|AER93283.1| | 3e-102 | SGT1 [Capsicum annuum] |
| JMFF004K14 | Sequence | 458 | 007444 (11) | ref|XP_011076089.1| | 4e-56 | PREDICTED: protein SGT1 homolog [Sesamum indicum] | 711 | 008352 (13) | ref|XP_004516698.1| | 7e-76 | PREDICTED: protein SGT1 homolog isoform X2 [Cicer arietinum] |
| JMFF024D15 | Sequence | 510 | 007444 (11) | ref|XP_011076089.1| | 6e-58 | PREDICTED: protein SGT1 homolog [Sesamum indicum] | 796 | 008352 (13) | gb|AAX83943.1| | 5e-86 | Sgt1b [Capsicum annuum] |
| JMFF034B19 | Sequence | 587 | 007444 (11) | gb|AAO85509.1| | 1e-62 | SGT1 [Nicotiana benthamiana] | 619 | 008352 (13) | ref|XP_004516698.1| | 1e-75 | PREDICTED: protein SGT1 homolog isoform X2 [Cicer arietinum] |
| JMFF038N24 | Sequence | 599 | 007444 (11) | gb|AAO85509.1| | 5e-63 | SGT1 [Nicotiana benthamiana] | 709 | 008352 (13) | ref|XP_004516698.1| | 3e-79 | PREDICTED: protein SGT1 homolog isoform X2 [Cicer arietinum] |
| JMFF042G09 | Sequence | 656 | 007444 (11) | gb|AAO85509.1| | 5e-79 | SGT1 [Nicotiana benthamiana] | 619 | 008352 (13) | ref|XP_006362653.1| | 6e-50 | PREDICTED: protein SGT1 homolog [Solanum tuberosum] |
| JMFF043P09 | Sequence | 604 | 007444 (11) | ref|XP_011076089.1| | 2e-57 | PREDICTED: protein SGT1 homolog [Sesamum indicum] | 592 | 008352 (13) | ref|XP_006362653.1| | 2e-36 | PREDICTED: protein SGT1 homolog [Solanum tuberosum] |
| JMFF045I21 | Sequence | 618 | 007444 (11) | gb|AAO85509.1| | 3e-68 | SGT1 [Nicotiana benthamiana] | 618 | 008352 (13) | gb|AFM35697.1| | 1e-64 | SGT1 [Vitis pseudoreticulata] |
| JMFF045P06 | Sequence | 649 | 007444 (11) | gb|AAO85509.1| | 6e-77 | SGT1 [Nicotiana benthamiana] | 549 | 008352 (13) | gb|KEH26376.1| | 2e-43 | suppressor of G2 allele of SKP1 protein [Medicago truncatula] |
| JMSF037H05 | Sequence | 699 | 007444 (11) | gb|AAO85509.1| | 6e-65 | SGT1 [Nicotiana benthamiana] | 755 | 008352 (13) | gb|AAX83943.1| | 2e-87 | Sgt1b [Capsicum annuum] |
This contig is upended
. : . : . : . : . : . :
JMSF037H05+ CATACTACTTTTACTAAAAGTCATTCAGATGATTAAATATTAAATTCACAT
____________________________________________________________
consensus CATACTACTTTTACTAAAAGTCATTCAGATGATTAAATATTAAATTCACAT
. : . : . : . : . : . :
JMSF037H05+ TCCCATGTTTGAACCAAATACCCTCTTTAAAGGAAAATGGAAGAAGAAAAAACCTATATT
JMFF042G09+ CCTATATT
JMFF043P09+ CCTATATT
JMFF045P06+ ATATAGTAACAACCACTTCCTCTGGTTTCTGATAGAATTCATGCCTATATT
____________________________________________________________
consensus TCCCATGTTTTATCGTAATACCCTCTTTCTCTGGTTTTTGATGGAGTTCATGCCTATATT
. : . : . : . : . : . :
JMSF037H05+ TTGGCTTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
JMFF042G09+ TTGGCTTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
JMFF043P09+ TTGGCTTCACAGCTGTTGCCCCCTGATAGGATAAATTAAAAGCTGGTGNGGCATCCTGTG
JMFF045P06+ TTGGCTTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
JMFF034B19+ CCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
JMFF045I21+ TTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
JMFF038N24+ TGGCTTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
____________________________________________________________
consensus TTGGCTTCACAGCTGTTTGCCCCTGATAGGATAAATTAAAAGCTGGTTGGGCATCCTGTG
. : . : . : . : . : . :
JMSF037H05+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF042G09+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF043P09+ G-TTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTGCCTNCCACAT
JMFF045P06+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF034B19+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF024D15+ ATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF003L04+ TTGCCTCCACTT
JMFF045I21+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
JMFF038N24+ GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
____________________________________________________________
consensus GTTTTTCTAATGGCACTGATTCAGGCAGGATTGCTACATCTGGTGTGGTTGCCTCCACTT
. : . : . : . : . : . :
JMSF037H05+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF042G09+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF004K14+ CTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF043P09+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF045P06+ TAACTTGTTCACCAGCTTCCTCTGCTATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF034B19+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF024D15+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF003L04+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF045I21+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
JMFF038N24+ TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
____________________________________________________________
consensus TAACTTGTTCACCAGCTTCCTCTGCAATGAGTTCATCACATTCTTTAATCAAATCATGGA
. : . : . : . : . : . :
JMSF037H05+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF042G09+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF004K14+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF043P09+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF045P06+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF034B19+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF024D15+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF003L04+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF045I21+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
JMFF038N24+ ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
____________________________________________________________
consensus ATTTTGGCTTCAAACTTTCTGGTGCCAAAGGAATCCCTGTCTCCAATGCTGTTTTGGCAG
. : . : . : . : . : . :
JMSF037H05+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF042G09+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF004K14+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF043P09+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF045P06+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF034B19+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF024D15+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF003L04+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF045I21+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
JMFF038N24+ TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
____________________________________________________________
consensus TCTGATATTCTTCAAGTTTCAAGCAGGCCGTGCCTTTACGCAAATAAGCTCTAGCCATTG
. : . : . : . : . : . :
JMSF037H05+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF042G09+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF004K14+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF043P09+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF045P06+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF034B19+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF024D15+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF003L04+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF045I21+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
JMFF038N24+ AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
____________________________________________________________
consensus AGGGATCCAACTCTATTGCCTTGTTTGCATCAGCTACAGCTTCGGTGAAGTTTTGGAGTT
. : . : . : . : . : . :
JMSF037H05+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF042G09+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF004K14+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF043P09+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF045P06+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF034B19+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF024D15+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF003L04+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF045I21+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
JMFF038N24+ TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
____________________________________________________________
consensus TGATGTTGGCTTGAGCGCGGTCGACGAAGAGCTCGGCGTTGTTAGGGCTCAAATCGATAG
. : . : . : . : . : . :
JMSF037H05+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF042G09+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF004K14+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF043P09+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF045P06+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF034B19+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF024D15+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF003L04+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF045I21+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
JMFF038N24+ CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
____________________________________________________________
consensus CCTGAGAGTAGAGATCAACGGCCAGCTCGAAGTATTCGTCGATGAAGGCATCCTTAGCCT
. : . : . : . : . : . :
JMSF037H05+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF042G09+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF004K14+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF001O05+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF043P09+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF045P06+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF034B19+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF024D15+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF003L04+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF045I21+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
JMFF038N24+ TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
____________________________________________________________
consensus TGCGTTCCAGATCAGACGCCATGGATTTTCCGACGGCACTCGACTACGGCGAACCAGAGA
. : . : . : . : . : . :
JMSF037H05+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACT
JMFF042G09+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAG
JMFF004K14+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAG
JMFF001O05+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTT
JMFF043P09+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAGCGA
JMFF045P06+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAGCGA
JMFF034B19+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTT
JMFF024D15+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTT
JMFF003L04+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTT
JMFF045I21+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAGCGA
JMFF038N24+ AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAGCGATGAG
____________________________________________________________
consensus AACAACACAGAACAGAACACTCTAGAACGATAGCAAATTGGACTACTTGCAAGCGATGAG