| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038M06 | Sequence | 504 | 007443 (6) | ref|XP_006339860.1| | 2e-41 | PREDICTED: probable WRKY transcription factor 15-like [Solanum tuberosum] | 732 | 007443 (6) | ref|XP_009764184.1| | 238 | PREDICTED: probable WRKY transcription factor 7 [Nicotiana sylvestris] |
| JMFF041F20 | Sequence | 647 | 007443 (6) | ref|XP_006339860.1| | 1e-52 | PREDICTED: probable WRKY transcription factor 15-like [Solanum tuberosum] | 602 | 007443 (6) | ref|XP_009764184.1| | 180 | PREDICTED: probable WRKY transcription factor 7 [Nicotiana sylvestris] |
| JMFF049C12 | Sequence | 388 | 007443 (6) | ref|XP_006339860.1| | 1e-32 | PREDICTED: probable WRKY transcription factor 15-like [Solanum tuberosum] | |||||
| JMSF027K19 | Sequence | 652 | 007443 (6) | ref|XP_006339860.1| | 2e-63 | PREDICTED: probable WRKY transcription factor 15-like [Solanum tuberosum] | 728 | 017167 | ref|XP_009764184.1| | 99.8 | PREDICTED: probable WRKY transcription factor 7 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF041F20- AACCTACACGAAATTTTTAAATATTCAAAATAAAATTAGAGTATCAC
rJMFF038M06- AAATAAAATTAGAGTATCAC
____________________________________________________________
consensus AACCTACACGAAATTTTTAAATATTCAAAATAAAATTAGAGTATCAC
. : . : . : . : . : . :
rJMFF041F20- TCAGAACTCAAACCCTACACATACCCTAACACTAGAGCAGAAGATACTAGGGTTACACTG
rJMFF038M06- TCAGAACTCAAACCCTACACATACCCTAACACTAGAGCAGAAGATACTAGGGTTACACTG
____________________________________________________________
consensus TCAGAACTCAAACCCTACACATACCCTAACACTAGAGCAGAAGATACTAGGGTTACACTG
. : . : . : . : . : . :
rJMFF041F20- TGAGCCTGCAGCCTGCACAAATTTTTACAGGGCAAACTGAGATCTGGATCTAGCTAGCCT
rJMFF038M06- TGAGCCTGCAGCCTGCACAAATTTTTACAGGGCAAACTGAGATCTGGATCTAGCTAGCCT
____________________________________________________________
consensus TGAGCCTGCAGCCTGCACAAATTTTTACAGGGCAAACTGAGATCTGGATCTAGCTAGCCT
. : . : . : . : . : . :
rJMFF041F20- CATCACCATGAATGAACTGATCATAATAATCTAAGAAGACTCTAAGATTAAACTGCTTGT
rJMFF038M06- CATCACCATGAATGAACTGATCATAATAATCTAAGAAGACTCTAAGATTAAACTGCTTGT
____________________________________________________________
consensus CATCACCATGAATGAACTGATCATAATAATCTAAGAAGACTCTAAGATTAAACTGCTTGT
. : . : . : . : . : . :
rJMFF041F20- TTCAGGTACAGAGAGGGAATGATTGTGCTCTCCTTCATATGTGACAATCAGCATGGTCGG
rJMFF038M06- TTCAGGTACAGAGAGGGAATGATTGTGCTCTCCTTCATATGTGACAATCAGCATGGTCGG
____________________________________________________________
consensus TTCAGGTACAGAGAGGGAATGATTGTGCTCTCCTTCATATGTGACAATCAGCATGGTCGG
. : . : . : . : . : . :
rJMFF041F20- ATCATCCAGAGCCCTCTCTACATGTTTACGTGCCGGACACCCTCTCACGCTGCTGCACTT
rJMFF038M06- ATCATCCAGAGCCCTCTCTACATGTTTACGTGCCGGACACCCTCTCACGCTGCTGCACTT
____________________________________________________________
consensus ATCATCCAGAGCCCTCTCTACATGTTTACGTGCCGGACACCCTCTCACGCTGCTGCACTT
. : . : . : . : . : . :
rJMFF041F20- GTAATATCCCCT
rJMFF038M06- GTAATATCCCCTAGGGTGTGGAGAGCCTTTAATAGGTTTCTGTCCATATTTCCTCCATGA
____________________________________________________________
consensus GTAATATCCCCTAGGGTGTGGAGAGCCTTTAATAGGTTTCTGTCCATATTTCCTCCATGA
. : . : . : . : . : . :
rJMFF038M06- GAAATCGTCAGGTGGGATGTCGGCCATCTTCATGCTTATTGCCGGAACTCTGGTCACCCT
____________________________________________________________
consensus GAAATCGTCAGGTGGGATGTCGGCCATCTTCATGCTTATTGCCGGAACTCTGGTCACCCT
. : . : . : . : . : . :
rJMFF038M06- CTTCTGTCTTAGCTTCTTTCTCTTGGAACAGTGGCATCGGCCGGAGGAGCCGCCGCTGCA
____________________________________________________________
consensus CTTCTGTCTTAGCTTCTTTCTCTTGGAACAGTGGCATCGGCCGGAGGAGCCGCCGCTGCA
. : . : . : . : . : . :
rJMFF038M06- CTTGCCGGAGAGGTTGTTCTCGGAGGAGCTGCACTTTCTCTTCAACGAAGACGAAGAAAG
JMSF027K19+ GGAGCTGCACTTTCTTTTCAACGAAGACGAAGAAAG
JMFF041F20+ AGACGAAGAAAG
____________________________________________________________
consensus CTTGCCGGAGAGGTTGTTCTCGGAGGAGCTGCACTTTCTTTTCAACGAAGACGAAGAAAG
. : . : . : . : . : . :
rJMFF038M06- CGGCGGCTTTCCGCCGGAGGAGGCCAGGGACAGATTGGTAATCTGGAAAGCAGAGGAAGA
JMSF027K19+ CGGCGGCTTTCCGCCGGAGGAGGCCAGGGACAGATTGGTAATCTGGAAAGCAGAGGAAGA
JMFF041F20+ CGGCGGCTTCCCGCCGGAGGAGGCCAGGGACAGATTGGTAATCTGGAAAGCAGAGGAAGA
____________________________________________________________
consensus CGGCGGCTTTCCGCCGGAGGAGGCCAGGGACAGATTGGTAATCTGGAAAGCAGAGGAAGA
. : . : . : . : . : . :
rJMFF038M06- AGACGCCTGTTTGCTCTCTGTCTCCCCGGTCAACGACGATAAATTGAAAGAGTTGGCCCG
JMSF027K19+ AGACGCCTGTTTGCTCTCTGTCTCCCCGGTCAACGACGATAAATTGAAAGAGTTGGCCCG
JMFF041F20+ AGACGCCTGTTTGCTCTCTGTCTCCCCGGTCAACGACGATAAATTGAAAGAGTTGGCCCG
____________________________________________________________
consensus AGACGCCTGTTTGCTCTCTGTCTCCCCGGTCAACGACGATAAATTGAAAGAGTTGGCCCG
. : . : . : . : . : . :
rJMFF038M06- CGAAACCTCCGGCGAGTACGAGAAACTAATCGTCTTTNCGCCGCCGCCG
JMSF027K19+ CGAAACCTCCGGCGAGTACGAGAAACTAATCGTCTTTCCGCCGCCGCCGCCGCCTCCGGC
JMFF041F20+ CGAAACCTCCGGCGAGTACGAGAAACTAATCGTCTTTCCGCCGCCGCCGCCGCCTCCGGC
JMFF038M06+ GCCGCCGCNGCNGCNTCCGGC
____________________________________________________________
consensus CGAAACCTCCGGCGAGTACGAGAAACTAATCGTCTTTCCGCCGCCGCCGCCGCCTCCGGC
. : . : . : . : . : . :
JMSF027K19+ GGCGCTCTTCGGCCGTGGGGAGTGATCGAAAGCAACCGGCGGCAGAACTTGCTGAATCGG
JMFF041F20+ GGCGCTCTTCGGCCGTGGGGAGTGATCGAAAGCAACCGGCGGCAAAACTTGCTGAATCGG
JMFF038M06+ GGCGCTNTTCGGCCGTGGGGAGTGATCGAAAGCAACCGGCGGCAGAACTTGNTGAATCGG
____________________________________________________________
consensus GGCGCTCTTCGGCCGTGGGGAGTGATCGAAAGCAACCGGCGGCAGAACTTGCTGAATCGG
. : . : . : . : . : . :
JMSF027K19+ CGTCGGATTATAAACCTTGGTGTCAACCTGGATATCCTTCGCCGGAACCGGCAAAGAAGA
JMFF041F20+ CGTCGGATTATAAACCTTGGTGTCAACCTGGATATCCTTCGCCGGAACCGGCAAAGAAGA
JMFF049C12+ TATCCTTCGCCGGAACCGGCAAAGAAGA
JMFF038M06+ CGTCGGATTATAAACCTTGGTGTCAACCTGGATATCCTTCGCCGGAACCGGCAAAGAAGA
____________________________________________________________
consensus CGTCGGATTATAAACCTTGGTGTCAACCTGGATATCCTTCGCCGGAACCGGCAAAGAAGA
. : . : . : . : . : . :
JMSF027K19+ AACGACGGGGGCTCTCCGGAACCGGGCGTGCCCGGTCCGGGTTCGACCCAGAAGATTAAT
JMFF041F20+ AACGACGGGGGCTCTCCGGAACCGGGCGTGCCCGGTCCGGGTTCGACCCAGAAGATTAAT
JMFF049C12+ AACGACGGGGGCTCTCCGGAACCGGGCGTGCCCGGTCCGGGTTCGACCCAGAAGATTAAT
JMFF038M06+ AACGACGGGGGCTCTCCGGAACCGGGCGTGCCCGGTCCGGGTTCGACCCAGAAGATTAAT
____________________________________________________________
consensus AACGACGGGGGCTCTCCGGAACCGGGCGTGCCCGGTCCGGGTTCGACCCAGAAGATTAAT
. : . : . : . : . : . :
JMSF027K19+ CACCTTCTGGAACTTATTCACCGCCACATCCGCCACCATTTCAATCTCCACCGACGACTT
JMFF041F20+ CACCTTCTGGAACTTATTCACCGCCACATCCGCCACCATTTCAATCTCCACCGACGACTT
JMFF049C12+ CACCTTCTGGAACTTATTCACCGCCACATCCGCCACCATTTCAATCTCCACCGACGACTT
JMFF038M06+ CACCTTCTGGAACTTATTCACCGCCACATCCGCCACCATTTCAATCTCCACCGACGACTT
____________________________________________________________
consensus CACCTTCTGGAACTTATTCACCGCCACATCCGCCACCATTTCAATCTCCACCGACGACTT
. : . : . : . : . : . :
JMSF027K19+ CTCCCGGCTCTCCGCCGCCTTATTCTGCTGCTGCTGCGACAACAATCTGATAAACGTATG
JMFF041F20+ CTCCCGGCTCCCCGCCGCCTTATTCTGCTGCTGCTGCGACAACAATCTGATAAACGTATG
JMFF049C12+ CTCCCGGCTCTCCGCCGCCTTATTCTGCTGCTGCTGCGACAACAATCTGATAAACGTATG
JMFF038M06+ CTCCCGGCTCTCCGCCGCCTTATTCTGCTGCTGCTGCGACAACAATCTGATAAACGTATG
____________________________________________________________
consensus CTCCCGGCTCTCCGCCGCCTTATTCTGCTGCTGCTGCGACAACAATCTGATAAACGTATG
. : . : . : . : . : . :
JMSF027K19+ AACGCTCTCAAGCCCCGACGCCGCCTCCTGCGCCACCGCGCTCTCCTCCAGCTTCTTCGC
JMFF041F20+ AACGCTCTCAAGCCCCGACGCCGCCTCCTG-GCCACCGCGCTCTCCTCCAGCTTCTTCGC
JMFF049C12+ AACGCTCTCAAGCCCCGACGCCGCCTCCTGCGCCACCGCGCTCTCCTCCAGCTTCTTCGC
JMFF038M06+ AACGCTCTCAAGCCCCGACGCCGCCTCCTGCGCCACCGCGCTCTCCTCCAGCTTCTTCGC
____________________________________________________________
consensus AACGCTCTCAAGCCCCGACGCCGCCTCCTGCGCCACCGCGCTCTCCTCCAGCTTCTTCGC
. : . : . : . : . : . :
JMSF027K19+ GAAGCTGAGATCACTACTCCTGCCGTTACCGCCGTGTCTGTAATCCATCATAAGCTCCAC
JMFF041F20+ GAAGCTGAGATCACTACTCCTGCCGTTACCGCCGTGTCTGTAATCCATCATAAGCTCCAC
JMFF049C12+ GAAGCTGAGATCACTACTCCTGCCGTTACCGCCGTGTCTGTAATCCATCATAAGCTCCAC
JMFF038M06+ GAAGCTGAGATCACTACTCCTGCCGTTACCGCCGTGTCTGTAATCCATCATAAGCTCCAC
____________________________________________________________
consensus GAAGCTGAGATCACTACTCCTGCCGTTACCGCCGTGTCTGTAATCCATCATAAGCTCCAC
. : . : . : . : . : . :
JMSF027K19+ TGCCATGGCCG
JMFF041F20+ TGCCATGGCCGCCCCAAGAAGAGAAACAGAGAAAAT
JMFF049C12+ TGCCATGGCCGCCCCAAGAAGAGAAACAGAGAAAATGTGATTCCAAACAAGAGTCAAAAT
JMFF038M06+ TGCCATGGCCGCCCCAAGAAGAGAAACAGAGAAAATGTGATTCCAAACAAGAGTCAAAAT
____________________________________________________________
consensus TGCCATGGCCGCCCCAAGAAGAGAAACAGAGAAAATGTGATTCCAAACAAGAGTCAAAAT