| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038L11 | Sequence | 580 | 007442 (7) | ref|XP_008812364.1| | 8e-48 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera] | 720 | 013780 (3) | gb|AEI98631.1| | 1e-19 | hypothetical protein 111O18.18 [Coffea canephora] |
| JMFS003G11 | Sequence | 587 | 007442 (7) | ref|XP_006340603.1| | 1e-73 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2 [Solanum t | |||||
| JMFS009A07 | Sequence | 605 | 007442 (7) | ref|XP_006340602.1| | 4e-59 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X1 [Solanum t | |||||
| JMFS060C02 | Sequence | 627 | 007442 (7) | ref|XP_006340603.1| | 2e-65 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2 [Solanum t | |||||
| JMFS098D08 | Sequence | 627 | 007442 (7) | ref|XP_006340603.1| | 3e-66 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2 [Solanum t | |||||
| JMFS109C02 | Sequence | 621 | 007442 (7) | ref|XP_008812364.1| | 8e-44 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera] | |||||
| JMSF051K04 | Sequence | 674 | 007442 (7) | ref|XP_006340603.1| | 8e-66 | PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2 [Solanum t | |||||
This contig is upended
. : . : . : . : . : . :
JMFS003G11+ AACCCCCTGTGGGGGTGCTCAATAATACCTACCCTCTTTATAGGACCAT
____________________________________________________________
consensus AACCCCCTGTGGGGGTGCTCAATAATACCTACCCTCTTTATAGGACCAT
. : . : . : . : . : . :
JMFS003G11+ AAGCCTCAAACTCCCTTTTGATTCTGCTTTCAGTTGTCTCATAGTTGAGTCTAGCTACAA
JMSF051K04+ TCCCTTTTGATTCTGCTTTCAGTTGTCTCATAGTTGAGTCTAGCTACAA
JMFS098D08+ TCCCTTTTGATTCTGCTNTCAGTTGTCTCATAGTTGAGTCTAGCTACAA
JMFS060C02+ TCCCTTTTGATTCTGCTTTCAGTTGTCTCATAGTTGAGTCTAGCTACAA
JMFS009A07+ AGTTGAGTCTAGCTACAA
____________________________________________________________
consensus AAGCCTCAAACTCCCTTTTGATTCTGCTTTCAGTTGTCTCATAGTTGAGTCTAGCTACAA
. : . : . : . : . : . :
JMFS003G11+ ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
JMSF051K04+ ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
JMFS098D08+ ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
JMFS109C02+ TTTTCAA
JMFS060C02+ ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
JMFS009A07+ ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
JMFF038L11+ CCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
____________________________________________________________
consensus ACAATGTTTTGTATGGATCTCCTGTAGCATTTGGGTCATTACTTGGATCATATTTTTCAA
. : . : . : . : . : . :
JMFS003G11+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMSF051K04+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMFS098D08+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMFS109C02+ GCTCTTCAGCAGCCTTNTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMFS060C02+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMFS009A07+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
JMFF038L11+ GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
____________________________________________________________
consensus GCTCTTCAGCAGCCTTTTCTGCTCCCTTTTCAAGCCTTATCTTGTGGACCCTAGCCCTTC
. : . : . : . : . : . :
JMFS003G11+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMSF051K04+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMFS098D08+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMFS109C02+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMFS060C02+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMFS009A07+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
JMFF038L11+ TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
____________________________________________________________
consensus TTTCTGTCGGAGTTTCAACCTCCTTAACAGGTGGAGCATATTCTGGATCACCCGGCTCAG
. : . : . : . : . : . :
JMFS003G11+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
JMSF051K04+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
JMFS098D08+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
JMFS109C02+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
JMFS060C02+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
JMFS009A07+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGAAGGGCATTTTCTCTTCTCAGGAG
JMFF038L11+ CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
____________________________________________________________
consensus CAAAATTACTAACGAATTGAGCCATTCCTGTATATGGAGGGCATTTTCTCTTCTCAGGAG
. : . : . : . : . : . :
JMFS003G11+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMSF051K04+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMFS098D08+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMFS109C02+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMFS060C02+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMFS009A07+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
JMFF038L11+ GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
____________________________________________________________
consensus GTGGTTTGAATTCCAGAGGTGGGCGAGGCTCAAACAGTTTTAGCAAATTAGTTGTCAAAC
. : . : . : . : . : . :
JMFS003G11+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTCCCATAACATTGGCACGGTTTTGGGCCT
JMSF051K04+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
JMFS098D08+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
JMFS109C02+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
JMFS060C02+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
JMFS009A07+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
JMFF038L11+ CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
____________________________________________________________
consensus CAGTAGGGTGGCTTTGACCAATCAGCTTGAGTTGCATAACATTGGCACGGTTTTGGGCCT
. : . : . : . : . : . :
JMFS003G11+ TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
JMSF051K04+ TGGTGCGCGCCTGAACGGCGGCGTTGTTG
JMFS098D08+ TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
JMFS109C02+ TGGTGCGCGCCTGAACGGCGGCGTTGTTG
JMFS060C02+ TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
JMFS009A07+ TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
JMFF038L11+ TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
____________________________________________________________
consensus TGGTGCGCGCCTGAACGGCGGCGTTGTTGCGCATGAACGCATCGTTGGGATCTCCCATTG
. : . : . : . : . : . :
JMFS003G11+ TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGG
JMFS098D08+ TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGGTT
JMFS060C02+ TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGGTT
JMFS009A07+ TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGGTT
JMFF038L11+ TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGGTT
____________________________________________________________
consensus TCGGCGATATCGAAGAGAAATCCTAGGGTTTCCCCTCGAAGGTAAATGATCGTCGCGGTT
. : . : . : . : . : . :
JMFS098D08+ ACGGTGAACGGACGGCGAAGATCAGATGCATCTATATATAGACCTGGATTGGAGAGAGTG
JMFS060C02+ ACGGTGAACGGACGGCGAAGATCAGATGCATCTATATATAGACCTGGATTGGAGAGAGTG
JMFS009A07+ ACGGTGAACGGACGGCGAAGATCAGATGCATCTATATATAGACCTGGATTGGAGAGAGTG
JMFF038L11+ ACGGTGAACGGACGGCGAAGATCAGATGCATCTATATATAGACCTGGATTGGAGAGAGTG
____________________________________________________________
consensus ACGGTGAACGGACGGCGAAGATCAGATGCATCTATATATAGACCTGGATTGGAGAGAGTG
. : . : . : . : . : . :
JMFS098D08+ AGAGATCTCTATCGCAGATAAGAGCGGCAGCGAA
JMFS060C02+ AGAGATCTCTATCGCAGATAAGAGCGGCAGCGAACCCA
JMFS009A07+ AGAGATCTCTATCGCAGATAAGAGCGGCAGCGAACCCAGAAAGCGAA
JMFF038L11+ AGAGATCTCTATCGCAGATAAGAGCGGCAGCGAACCCAGAAAGCGAAGCGGAAGGGTTTT
____________________________________________________________
consensus AGAGATCTCTATCGCAGATAAGAGCGGCAGCGAACCCAGAAAGCGAAGCGGAAGGGTTTT