Contig 007436:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036O15Sequence544007436 (2)ref|XP_009613221.1|1e-42PREDICTED: F-box protein CPR30-like [Nicotiana tomentosiformis]723007436 (2)ref|XP_009613221.1|3e-78PREDICTED: F-box protein CPR30-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF036O15-                        TTATATTATATGCAAAATTATATTCTTACACTTCTCACTTTTGAGC
                      ____________________________________________________________
consensus                           TTATATTATATGCAAAATTATATTCTTACACTTCTCACTTTTGAGC
 
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rJMFF036O15-          AACTAGATTCTTGATTGAAACTAAGCTCTCCTTGAATACAGAAGCCTGCAGAGAATATCC
                      ____________________________________________________________
consensus             AACTAGATTCTTGATTGAAACTAAGCTCTCCTTGAATACAGAAGCCTGCAGAGAATATCC
 
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rJMFF036O15-          TTTTCTCCTAGGTCCAAGAGCCCTGATTTCTTTGCTCCTAGGATCATACATGTGCAGTTC
                      ____________________________________________________________
consensus             TTTTCTCCTAGGTCCAAGAGCCCTGATTTCTTTGCTCCTAGGATCATACATGTGCAGTTC
 
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rJMFF036O15-          CGAATTCACAATTTCTAACAAAACTTCACCATTTTTCCCATATCCCAGCGGCCTCTTGAT
                      ____________________________________________________________
consensus             CGAATTCACAATTTCTAACAAAACTTCACCATTTTTCCCATATCCCAGCGGCCTCTTGAT
 
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rJMFF036O15-          ATTCAAAAAGGGTCCAAGACTCGCCATTTTGGTCCAACACATTGCCCTATCCATAACCCA
                      ____________________________________________________________
consensus             ATTCAAAAAGGGTCCAAGACTCGCCATTTTGGTCCAACACATTGCCCTATCCATAACCCA
 
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rJMFF036O15-          TACATCAATGCTTGTCTGCATATTCATCGATTCATACAGAAACATAGCAACAGAATCATT
                      ____________________________________________________________
consensus             TACATCAATGCTTGTCTGCATATTCATCGATTCATACAGAAACATAGCAACAGAATCATT
 
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rJMFF036O15-          GTACAAAGCCAAATCTCCCTGCGTGGATTTGAATGTTTCTGGTGTTTGGATCTCCCGAAA
                      ____________________________________________________________
consensus             GTACAAAGCCAAATCTCCCTGCGTGGATTTGAATGTTTCTGGTGTTTGGATCTCCCGAAA
 
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rJMFF036O15-          AACCTCATTTCCCATGTCGAATGAAACGACCTTCCCATTGTTGTTTGCTCTCCAGTAGTA
                      ____________________________________________________________
consensus             AACCTCATTTCCCATGTCGAATGAAACGACCTTCCCATTGTTGTTTGCTCTCCAGTAGTA
 
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rJMFF036O15-          AAAACCATCCAAGTATGCGTTACAGCAAGATTTACCCAGTATGCGGCTGCAGATATGAAG
                      ____________________________________________________________
consensus             AAAACCATCCAAGTATGCGTTACAGCAAGATTTACCCAGTATGCGGCTGCAGATATGAAG
 
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rJMFF036O15-          TTCTTCAAAGTGTTTCCAGGAATCAGTGGTGAGTGTATAAACTGAGATAATCGCAGGTGA
                      ____________________________________________________________
consensus             TTCTTCAAAGTGTTTCCAGGAATCAGTGGTGAGTGTATAAACTGAGATAATCGCAGGTGA
 
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rJMFF036O15-          ATGCCAAGCATCCGCGATTGGATCCCAATAGTCTCTTATCCAAACAACTTTATAATTGCC
JMFF036O15+                                                                   TGCC
                      ____________________________________________________________
consensus             ATGCCAAGCATCCGCGATTGGATCCCAATAGTCTCTTATCCAAACAACTTTATAATTGCC
 
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rJMFF036O15-          GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
JMFF036O15+           GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
                      ____________________________________________________________
consensus             GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
 
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rJMFF036O15-          TTCTGGGTATGAAACTG                                           
JMFF036O15+           TTCTGGGTATGAAACTGGGAGAGACTTGGCCTCCCTAGTAGCAGGGTTCCAAAGAGTCAC
                      ____________________________________________________________
consensus             TTCTGGGTATGAAACTGGGAGAGACTTGGCCTCCCTAGTAGCAGGGTTCCAAAGAGTCAC
 
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JMFF036O15+           CTGTTCTTGATCATTGTACAGAGAAAACAGCCCGTTTAGCGGGCCGTTTATTTCCCACAC
                      ____________________________________________________________
consensus             CTGTTCTTGATCATTGTACAGAGAAAACAGCCCGTTTAGCGGGCCGTTTATTTCCCACAC
 
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JMFF036O15+           GGAAACCGAAGTGTTGGTGTAATCTTGGTAGGAATGGGAGGCGAGAACTTGGGTTTCTTC
                      ____________________________________________________________
consensus             GGAAACCGAAGTGTTGGTGTAATCTTGGTAGGAATGGGAGGCGAGAACTTGGGTTTCTTC
 
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JMFF036O15+           ATCGAACAATGAAAACCCAGATTCCATGGCGTCGAGCGAGTAATGGTGAACGAAGGAGAG
                      ____________________________________________________________
consensus             ATCGAACAATGAAAACCCAGATTCCATGGCGTCGAGCGAGTAATGGTGAACGAAGGAGAG
 
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JMFF036O15+           TGCGGGGTTGGTGGGATGGTGGTGGTGCTTTGCGACGAAATTTGGGGTTTGAATGAGAGG
                      ____________________________________________________________
consensus             TGCGGGGTTGGTGGGATGGTGGTGGTGCTTTGCGACGAAATTTGGGGTTTGAATGAGAGG
 
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JMFF036O15+           CGCCAGTTCTTGCGCAGCGATTTGCACTGCAGAAGGGACTTGGCAGGCAGCCTTGATAAG
                      ____________________________________________________________
consensus             CGCCAGTTCTTGCGCAGCGATTTGCACTGCAGAAGGGACTTGGCAGGCAGCCTTGATAAG
 
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JMFF036O15+           ATCTCCGCTACCACATCCTCCGGCAAATGCTCAAACTTTGTCTCTTCTGCAGTCATTCTG
                      ____________________________________________________________
consensus             ATCTCCGCTACCACATCCTCCGGCAAATGCTCAAACTTTGTCTCTTCTGCAGTCATTCTG
 
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JMFF036O15+           ATCTGCTTCTTTGATCTTCTCAAGATCTGAGAGACTGAGGGTTTGTGGTCAGAGAAAAAT
                      ____________________________________________________________
consensus             ATCTGCTTCTTTGATCTTCTCAAGATCTGAGAGACTGAGGGTTTGTGGTCAGAGAAAAAT