Contig 007432:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M02Sequence521007432 (5)ref|XP_006366355.1|2e-79PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]766009702 (3)ref|XP_011094987.1|2e-49PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]
JMFF024N18Sequence490007432 (5)ref|XP_006366355.1|7e-71PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]764009702 (3)ref|XP_011094987.1|5e-51PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]
JMFF035L01Sequence618007432 (5)ref|XP_006366355.1|2e-97PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]692009702 (3)ref|XP_011094987.1|4e-88PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]
JMSF011P11Sequence218022062744007432 (5)ref|XP_006366355.1|2e-24PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]
JMSF044B07Sequence778007432 (5)emb|CDP03624.1|6e-117unnamed protein product [Coffea canephora]717017248ref|XP_007198989.1|6e-20hypothetical protein PRUPE_ppa004422mg [Prunus persica] gb|EMJ00188.1| hypotheti

Alignment

This contig is upended


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JMSF044B07+                                               TGCGGTTTCAACATCATTCAACGA
                      ____________________________________________________________
consensus                                                 TGCGGTTTCAACATCATTCAACGA
 
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JMSF044B07+           TGCACATACAGCCAACCAAAGATTGTATGATACAAGATCTGGCGAAGTATTCTTCTTTAA
                      ____________________________________________________________
consensus             TGCACATACAGCCAACCAAAGATTGTATGATACAAGATCTGGCGAAGTATTCTTCTTTAA
 
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JMSF044B07+           TTCTTGAATCATAGCCGGAATCTTCTCTAATTGCCCAGTTGATATGTATAGAGAGAGCAT
                      ____________________________________________________________
consensus             TTCTTGAATCATAGCCGGAATCTTCTCTAATTGCCCAGTTGATATGTATAGAGAGAGCAT
 
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JMSF044B07+           GTGGTTGTAAGGAAGTGGATGCTTCACAAAATCACATTCGGACATTTTTTCCATCAGAGC
                      ____________________________________________________________
consensus             GTGGTTGTAAGGAAGTGGATGCTTCACAAAATCACATTCGGACATTTTTTCCATCAGAGC
 
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JMSF044B07+           CTCGGCTTTAACACAGTCTTGCTCCTGGACATAGCAGTGGAGAAGGGCACTACACGTAGC
                      ____________________________________________________________
consensus             CTCGGCTTTAACACAGTCTTGCTCCTGGACATAGCAGTGGAGAAGGGCACTACACGTAGC
 
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JMSF044B07+           ATGGTCCTTCATTTTATCGGGAATATCCTCGAAAAATTTCTCAGCGCTATTCATTCCTCG
                      ____________________________________________________________
consensus             ATGGTCCTTCATTTTATCGGGAATATCCTCGAAAAATTTCTCAGCGCTATTCATTCCTCG
 
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JMSF044B07+           AACTTTTGCAATCAAATCCAAATGCACAGCATAATCCCCCGATAAAAGGTGGATATCATC
                      ____________________________________________________________
consensus             AACTTTTGCAATCAAATCCAAATGCACAGCATAATCCCCCGATAAAAGGTGGATATCATC
 
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JMSF044B07+           TTGTATCCTCATCCACTCACAAACCTCGAGGGCGTGTTTGTATCGCCGGAGCTTCCGGAG
rJMSF011P11-                                                                CCGGAG
                      ____________________________________________________________
consensus             TTGTATCCTCATCCACTCACAAACCTCGAGGGCGTGTTTGTATCGCCGGAGCTTCCGGAG
 
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JMSF044B07+           CTCCCTTACTACGCGGTTGAGCTCGTATTTCCGGACGGCGTGGCCCTCCTCCTTCCACTT
rJMSF011P11-          CTCCCTTACTACGCGGTTGAGCTCGTATTTGTGGACGGTGTGGCCCTCCTCCTTCCACTC
                      ____________________________________________________________
consensus             CTCCCTTACTACGCGGTTGAGCTCGTATTTGTGGACGGTGTGGCCCTCCTCCTTCCACTT
 
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JMSF044B07+           CCGTATAGTGATGACTGCGCTACGCTTAGCGTACACGAGACTTAGAAGCCTCCTCCCCAG
rJMSF011P11-          CCGTATAGTAATGACTGCACTACGCTTAGCGTACACGAGACTTAGTAGCCTCC-AGCCAG
                      ____________________________________________________________
consensus             CCGTATAGTGATGACTGCGCTACGCTTAGCGTACACGAGACTTAGTAGCCTCCTCGCCAG
 
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JMSF044B07+           AGTGTCCCTGCCGCCCTTACTCGTGGCCGTGTGACTTCCGCTGCCGCCTCCTGCAGCCGT
rJMSF011P11-          AGTATCTCTGTCGCCCTTACTCGTGGTCGTGGGATTTCCGCTGTCGCCTCCTGCAGCCGT
                      ____________________________________________________________
consensus             AGTGTCTCTGTCGCCCTTACTCGTGGTCGTGTGATTTCCGCTGTCGCCTCCTGCAGCCGT
 
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JMSF044B07+           GGGCTTCGTCGCTGCCTCCACCGCCGTTGCTTCCGCCGAGAAGTGGCGCACGGCGGCGAC
rJMSF011P11-          GGGCTTCGTCGCAG------------------CCGCCGAGAAGTGGCGCACGGCGGCGAC
                      ____________________________________________________________
consensus             GGGCTTCGTCGCTGCCTCCACCGCCGTTGCTTCCGCCGAGAAGTGGCGCACGGCGGCGAC
 
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JMSF044B07+           GGATGTCCGAGCCAAACGTAGAAGCATTTTCATCTTTTTCCACTGCCCTGTTTCTGAGAA
rJMSF011P11-          GGATGTCCGAGCCAAACGTAGAAGCATTTTCATCTTTTTCCATTGCCTTGTTTCTGAGAA
                      ____________________________________________________________
consensus             GGATGTCCGAGCCAAACGTAGAAGCATTTTCATCTTTTTCCATTGCCTTGTTTCTGAGAA
 
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JMSF044B07+           GGGCAGCACATTTGGGCTTGGAATATGAACACT                           
rJMSF011P11-          GGGCAGCACATTTGGGCTTGGATTATTAACACTGAAATGTTCCTGGGCTGTTACCCGGTG
                      ____________________________________________________________
consensus             GGGCAGCACATTTGGGCTTGGATTATTAACACTGAAATGTTCCTGGGCTGTTACCCGGTG
 
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rJMSF011P11-          TTCAAATTTCGACCCCATCGCTACAATATCCGACCACCTTGAGCAATCCAAACTGATCCA
JMFF002M02+                                          GACCACCGTGAGCAATCCAAACTGATCCA
JMFF024N18+                                          GACCACCGTGAGCAATCCAAACTGATCCA
JMFF035L01+                                          GACCACCGTGAGCAATCCAAACTGATCCA
                      ____________________________________________________________
consensus             TTCAAATTTCGACCCCATCGCTACAATATCCGACCACCGTGAGCAATCCAAACTGATCCA
 
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rJMSF011P11-          TAGGAGTCGATGGCATTGAAGTCCGATACGACACCGTCGGAGGACGTTTTAATGGTGGTA
JMFF002M02+           TCGGAGTCGATGGCGTTGAAGTCCGATACGACACCGTCGGAGGAGGGTTTAATGGTGGTA
JMFF024N18+           TCGGAGTCGATGGCGTTGAAGTCCGATACGACACCGTCGGAGGAGGGTTTAATGGTGGTA
JMFF035L01+           TCGGAGTCGATGGCGTTGAAGTCCGATACGACACCGTCGGAGGAGGGTTTAATGGTGGTA
                      ____________________________________________________________
consensus             TCGGAGTCGATGGCGTTGAAGTCCGATACGACACCGTCGGAGGAGGGTTTAATGGTGGTA
 
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rJMSF011P11-          AATAGTGAAGCGTCAATTTCGCTGAGTTGAATCGGAGCAAGAACATATATAAGTTGTGAC
JMFF002M02+           AACAGTGAAGCGTCAATTCCGCTGAGTTGAATCGGAGCGAGAGCAGATCTGAGTTGCGAC
JMFF024N18+           AACAGTGAAGCGTCAATTCCGCTGAGTTGAATCGGAGCGAGAGCAGATCTGAGTTGCGAC
JMFF035L01+           AACAGTGAAGCGTCAATTCCGCTGAGTTGAATCGGAGCGAGAGCAGATCTGAGTTGCGAC
                      ____________________________________________________________
consensus             AACAGTGAAGCGTCAATTCCGCTGAGTTGAATCGGAGCGAGAGCAGATCTGAGTTGCGAC
 
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rJMSF011P11-          TCGATGTCGTAATAGAGCGCTTCGTTGATGAGCTCCTGATTTGAGAAC            
JMFF002M02+           TCGATGCCGTAATAGAGCGCCTCGTCGATGAGCTCCTGATTCGAGAACCGTCTGGCGGTG
JMFF024N18+           TCGATGCCGTAATAGAGCGCCTCGTCGATGAGCTCCTGATTCGAGAACCGTCTGGCGGTG
JMFF035L01+           TCGATGCCGTAATAGAGCGCCTCGTCGATGAGCTCCTGATTCGAGAACCGTCTGGCGGTG
                      ____________________________________________________________
consensus             TCGATGCCGTAATAGAGCGCCTCGTCGATGAGCTCCTGATTCGAGAACCGTCTGGCGGTG
 
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JMFF002M02+           GACGGGAGGCGGTTGGTCCGGAGGAGAGAGAGGAGGGCGGAGAAGATTTCCGGGTCGCGG
JMFF024N18+           GACGGGAGGCGGTTGGTCCGGAGGAGAGAGAGGAGGGCGGAGAAGATTTCCGGGTCGCGG
JMFF035L01+           GACGGGAGGCGGTTGGTCCGGAGGAGAGAGAGGAGGGCGGAGAAGATTTCCGGGTCGCGG
                      ____________________________________________________________
consensus             GACGGGAGGCGGTTGGTCCGGAGGAGAGAGAGGAGGGCGGAGAAGATTTCCGGGTCGCGG
 
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JMFF002M02+           TCTATGAAAAGCTCGTCATGGGAAGGCCGGTTCGATAACGCCGATAAAAGAGAGTCGGAA
JMFF024N18+           TCTATGAAAAGCTCGTCATGGGAAGGCCGGTTCGATAACGCCGATAAAAGAGAGTCGGAA
JMFF035L01+           TCTATGAAAAGCTCGTCATGGGAAGGCCGGTTCGATAACGCCGATAAAAGAGAGTCGGAA
                      ____________________________________________________________
consensus             TCTATGAAAAGCTCGTCATGGGAAGGCCGGTTCGATAACGCCGATAAAAGAGAGTCGGAA
 
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JMFF002M02+           CCACCGGACTGGAGCGTAGAGACGGTGGTCTCGAAGAGCTTGCCGCCGACGTTGAGTTTG
JMFF024N18+           CCACCGGACTGGAGCGTAGAGACGGTGGTCTCGAAGAGCTTGCCGCCGACGTTGAGTTTG
JMFF035L01+           CCACCGGACTGGAGCGTAGAGACGGTGGTCTCGAAGAGCTTGCCGCCGACGTTGAGTTTG
                      ____________________________________________________________
consensus             CCACCGGACTGGAGCGTAGAGACGGTGGTCTCGAAGAGCTTGCCGCCGACGTTGAGTTTG
 
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JMFF002M02+           ACCCGGTCACCGGGCTGGGCATTTTGGGGATTTCCTTCCTCCATGAATCAGCGAT     
JMFF024N18+           ACCCGGTCACCGGGCTGGGCATTTTGGGGATTTCCTTCCTCCATGAATCAGCGAT     
JMFF035L01+           ACCCGGTCACCGGGCTGGGCATTTTGGGGATTTCCTTCCTCCATGAATCAGCGATAAGAT
                      ____________________________________________________________
consensus             ACCCGGTCACCGGGCTGGGCATTTTGGGGATTTCCTTCCTCCATGAATCAGCGATAAGAT