Contig 007429:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H21Sequence401007429 (11)565007429 (11)gb|AAA33132.1|6e-11hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa]
JMFF024L10Sequence431007429 (11)570007429 (11)gb|AAA33132.1|5e-19hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa]
JMFF035A24Sequence477007429 (11)637008179 (5)ref|NP_001274794.1|2e-41plastidic ATP/ADP-transporter [Solanum tuberosum] sp|O24381.2|TLC1_SOLTU RecName
JMFF035K04Sequence545007429 (11)571007429 (11)gb|AAA33132.1|7e-25hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa]
JMFF043J06Sequence643007429 (11)ref|WP_029230589.1|5e-06hypothetical protein [Calescamantes bacterium JGI 0000106-N5]579007429 (11)gb|AAA33132.1|9e-20hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa]
JMFF050F06Sequence626007429 (11)602007429 (11)gb|AAA33132.1|1e-19hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050F06- CCTTATGGCGGAACACCCTGGAGAGTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus CCTTATGGCGGAACACCCTGGAGAGTTTTTTTTTTTTTTT
 
. : . : . : . : . : . :
rJMFF043J06- TTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
rJMFF035K04- TTTTTTTTTTTTAATCCTCAACAGTTGNGATTACAATAATATAAA
rJMFF050F06- CCTGCTGATATGATTTTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
rJMFF004H21- TATAAA
rJMFF024L10- TAAA
                      ____________________________________________________________
consensus CCTGCTGATATGATTTTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
 
. : . : . : . : . : . :
rJMFF043J06- AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
rJMFF035K04- ANAACAACAACANTTTCCATCCTGTTTTGGATACNAACAAAATACAAAACNCCTTGNGTT
rJMFF050F06- AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
rJMFF004H21- AGAACAACANCANTTTCCNTCCTGTTTTGGATACAAACAAAATACAAAACNCCTTGNGTT
rJMFF024L10- AGAACAACAACANTTTCCNTCCTGTTTTGGATACNAACAAAATACAAAACNCCTTGNGTT
                      ____________________________________________________________
consensus AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
 
. : . : . : . : . : . :
rJMFF043J06- AGTAGACAGTACAACGTACGCAAGAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
rJMFF035K04- ANTAAACAGNACAACGTACNCAAAAAAACCCCATAATCCAAACNAAAATCTTCCTGTTAT
rJMFF050F06- AGTAGACAGTACAACGTACGCAAGAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
rJMFF004H21- ANTAAACAGTACAACGTACNCAAAAAAACCCCATAATCCAAACAAAAATCTTCCTGTTAT
rJMFF024L10- ANTAAACAGTACAACGTACNCAAAAAAACCCCATAATCCAAACNAAAATCTTCCTGTTAT
                      ____________________________________________________________
consensus AGTAAACAGTACAACGTACGCAAAAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
 
. : . : . : . : . : . :
rJMFF043J06- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
rJMFF035K04- TGNATCATGGNTTAATA-TCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGNACACT
rJMFF050F06- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
rJMFF004H21- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGNACACT
rJMFF024L10- TGGATCATGGNTTAATATTCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGGACANT
                      ____________________________________________________________
consensus TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
 
. : . : . : . : . : . :
rJMFF043J06- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCGATGAGGACTTGAAGCGCGATGGGGA
rJMFF035K04- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCAATNAGGACTTGAANCNCNATGGGNA
rJMFF050F06- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCGATGAGGACTTGAAGCGCGATGGGGA
rJMFF004H21- TGAACCCTTCCGGGGGANTCTTCCCNCANTCGTCAATNAGGANTTGAANCNCGATGGGGA
rJMFF024L10- TGAACCCTTCCGGGGGAGTNTTCCCACAGTCGNCAATNAGGACTTGAANCNCNATGGGGA
                      ____________________________________________________________
consensus TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCAATGAGGACTTGAAGCGCGATGGGGA
 
. : . : . : . : . : . :
rJMFF043J06- GGATAATGTTTATGTTCAGAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
rJMFF035K04- GGATAATGTTTATGTTCAAAANCTTACCTCTAATGGNGGNGCAAAGGCATATTCCGGNGT
rJMFF050F06- GGATAATGTTTATGTTCAGAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
rJMFF004H21- GGATAATGTTTATGTTCAAAANCTTANCTCTAATGGNGGNGCAAAGGCATATTCCGGCGT
rJMFF024L10- GGATAATGTTTATGTTCAAAANCTTACCTCTAATGGNGGNGCAAAGGCATATTCCGGCGT
                      ____________________________________________________________
consensus GGATAATGTTTATGTTCAAAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
 
. : . : . : . : . : . :
rJMFF043J06- CTAACCCTGCAAGTCCTCCCAGAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
rJMFF035K04- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
rJMFF050F06- CTAACCCTGCAAGTCCTCCCAGAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
rJMFF004H21- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
rJMFF024L10- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
                      ____________________________________________________________
consensus CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
 
. : . : . : . : . : . :
rJMFF043J06- CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCGATCG
rJMFF035K04- CAATGNGNATCANCCCNCCCAGNAAGTCCACNCATGCCCCCAGNTTCAGGGCGTCAATCG
rJMFF050F06- CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCGATCG
rJMFF004H21- CAATGNGGATCACCCCNCCCANNAAGTCCACNCNTGCCCCCAGNTTCAGGGCGTCAATCG
rJMFF024L10- CNATGNGNATCANCCCNCCCAGCAAGTCCACNCATGCCCCCAGNTTCAGGGCGTCAATCG
                      ____________________________________________________________
consensus CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCAATCG
 
. : . : . : . : . : . :
rJMFF043J06- GGCAAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTC-ACTGGAGGTGGAG
rJMFF035K04- GGNAANTTGGTTGCCCCGGCGGCGGCGGCGGCGGGCACGGNTTTTCA
rJMFF050F06- GGNCAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTC-ACTGGAGGTGGAG
rJMFF004H21- GGNAAATTGGTTGCNCCGGCGGCGGCGGCGGCGGNCACGGNTTTTCAACTGGAGGTGGAG
rJMFF024L10- GGCAANTTGGTTGCCCCGGCGGCGGCGGCGGCGGNCACGGTTTTTCAANTGNAGGTGGAG
JMFF050F06+ G
JMFF043J06+ CGGCGGCGGCGGCGGCGGGCACGGCTTTTCAACTG-AGGTGGAG
                      ____________________________________________________________
consensus GGCAAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTCAACTGGAGGTGGAG
 
. : . : . : . : . : . :
rJMFF043J06- GAGGAGGTGG
rJMFF050F06- GAGGAGGTGGGCATGGCTTT
rJMFF004H21- GAGGAGGTGGNCNTGGNTTTTCCACTGGCGGNAAAGGTANTGGAGGCGGCGGTGTACCTA
rJMFF024L10- GAGGAGGTGGGCATGGNTTTTCCACTGGCGGNAAAGGNANTGNAGGCGGCGGTGTACCTA
JMFF050F06+ GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
JMFF035K04+ GTGTAGCTA
JMFF043J06+ GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
                      ____________________________________________________________
consensus GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
 
. : . : . : . : . : . :
rJMFF004H21- CCGGAGGCTTTGGC
rJMFF024L10- CCGGAGGNTTTGGC
JMFF050F06+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
JMFF035K04+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
JMFF043J06+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
                      ____________________________________________________________
consensus CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
 
. : . : . : . : . : . :
JMFF050F06+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF035K04+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF024L10+ CGACAGGAGGCGTTG
JMFF043J06+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF035A24+ GCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGNCAGGAGGCGTTG
                      ____________________________________________________________
consensus CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
 
. : . : . : . : . : . :
JMFF050F06+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF035K04+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF004H21+ AACGACCGGAGGTTTGGGAATGTCCGGAGGATGAACCACCG
JMFF024L10+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF043J06+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF035A24+ GGACAATGGGTGGTGCNTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
                      ____________________________________________________________
consensus GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
 
. : . : . : . : . : . :
JMFF050F06+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF035K04+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF004H21+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF024L10+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF043J06+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGTGGCGGGTGCA
JMFF035A24+ GCGNTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGTGNCGGGTGCA
                      ____________________________________________________________
consensus GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
 
. : . : . : . : . : . :
JMFF050F06+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF035K04+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF004H21+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF024L10+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF043J06+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF035A24+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
                      ____________________________________________________________
consensus CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
 
. : . : . : . : . : . :
JMFF050F06+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF035K04+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF004H21+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF024L10+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF043J06+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF035A24+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
                      ____________________________________________________________
consensus GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
 
. : . : . : . : . : . :
JMFF050F06+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF035K04+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF004H21+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF024L10+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF043J06+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF035A24+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
                      ____________________________________________________________
consensus GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
 
. : . : . : . : . : . :
JMFF050F06+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF035K04+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF004H21+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF024L10+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF043J06+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF035A24+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
                      ____________________________________________________________
consensus AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
 
. : . : . : . : . : . :
JMFF050F06+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCT
JMFF035K04+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF004H21+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGA
JMFF024L10+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF043J06+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF035A24+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGACAAGT
                      ____________________________________________________________
consensus GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGACAAGT