clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004H21 | Sequence | 401 | 007429 (11) | 565 | 007429 (11) | gb|AAA33132.1| | 6e-11 | hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa] | |||
JMFF024L10 | Sequence | 431 | 007429 (11) | 570 | 007429 (11) | gb|AAA33132.1| | 5e-19 | hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa] | |||
JMFF035A24 | Sequence | 477 | 007429 (11) | 637 | 008179 (5) | ref|NP_001274794.1| | 2e-41 | plastidic ATP/ADP-transporter [Solanum tuberosum] sp|O24381.2|TLC1_SOLTU RecName | |||
JMFF035K04 | Sequence | 545 | 007429 (11) | 571 | 007429 (11) | gb|AAA33132.1| | 7e-25 | hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa] | |||
JMFF043J06 | Sequence | 643 | 007429 (11) | ref|WP_029230589.1| | 5e-06 | hypothetical protein [Calescamantes bacterium JGI 0000106-N5] | 579 | 007429 (11) | gb|AAA33132.1| | 9e-20 | hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa] |
JMFF050F06 | Sequence | 626 | 007429 (11) | 602 | 007429 (11) | gb|AAA33132.1| | 1e-19 | hybrid proline-rich protein;cytokinin-induced;haustoria [Cuscuta reflexa] |
This contig is upended
. : . : . : . : . : . :
rJMFF050F06- CCTTATGGCGGAACACCCTGGAGAGTTTTTTTTTTTTTTT
____________________________________________________________
consensus CCTTATGGCGGAACACCCTGGAGAGTTTTTTTTTTTTTTT
. : . : . : . : . : . :
rJMFF043J06- TTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
rJMFF035K04- TTTTTTTTTTTTAATCCTCAACAGTTGNGATTACAATAATATAAA
rJMFF050F06- CCTGCTGATATGATTTTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
rJMFF004H21- TATAAA
rJMFF024L10- TAAA
____________________________________________________________
consensus CCTGCTGATATGATTTTTTTTTTTTTTAATCCTCAACAGTTGTGATTACAATAATATAAA
. : . : . : . : . : . :
rJMFF043J06- AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
rJMFF035K04- ANAACAACAACANTTTCCATCCTGTTTTGGATACNAACAAAATACAAAACNCCTTGNGTT
rJMFF050F06- AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
rJMFF004H21- AGAACAACANCANTTTCCNTCCTGTTTTGGATACAAACAAAATACAAAACNCCTTGNGTT
rJMFF024L10- AGAACAACAACANTTTCCNTCCTGTTTTGGATACNAACAAAATACAAAACNCCTTGNGTT
____________________________________________________________
consensus AGAACAACAACAATTTCCATCCTGTTTTGGATACGAACAAAATACAAAACACCTTGTGTT
. : . : . : . : . : . :
rJMFF043J06- AGTAGACAGTACAACGTACGCAAGAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
rJMFF035K04- ANTAAACAGNACAACGTACNCAAAAAAACCCCATAATCCAAACNAAAATCTTCCTGTTAT
rJMFF050F06- AGTAGACAGTACAACGTACGCAAGAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
rJMFF004H21- ANTAAACAGTACAACGTACNCAAAAAAACCCCATAATCCAAACAAAAATCTTCCTGTTAT
rJMFF024L10- ANTAAACAGTACAACGTACNCAAAAAAACCCCATAATCCAAACNAAAATCTTCCTGTTAT
____________________________________________________________
consensus AGTAAACAGTACAACGTACGCAAAAAAACCCCATAATCCAAACGAAAATCTTCCTGTTAT
. : . : . : . : . : . :
rJMFF043J06- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
rJMFF035K04- TGNATCATGGNTTAATA-TCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGNACACT
rJMFF050F06- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
rJMFF004H21- TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGNACACT
rJMFF024L10- TGGATCATGGNTTAATATTCAATTTATTCTGATCTGATCNATCCTCTCAGGNGGGACANT
____________________________________________________________
consensus TGGATCATGGCTTAATATTCAATTTATTCTGATCTGATCGATCCTCTCAGGCGGGACACT
. : . : . : . : . : . :
rJMFF043J06- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCGATGAGGACTTGAAGCGCGATGGGGA
rJMFF035K04- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCAATNAGGACTTGAANCNCNATGGGNA
rJMFF050F06- TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCGATGAGGACTTGAAGCGCGATGGGGA
rJMFF004H21- TGAACCCTTCCGGGGGANTCTTCCCNCANTCGTCAATNAGGANTTGAANCNCGATGGGGA
rJMFF024L10- TGAACCCTTCCGGGGGAGTNTTCCCACAGTCGNCAATNAGGACTTGAANCNCNATGGGGA
____________________________________________________________
consensus TGAACCCTTCCGGGGGAGTCTTCCCACAGTCGTCAATGAGGACTTGAAGCGCGATGGGGA
. : . : . : . : . : . :
rJMFF043J06- GGATAATGTTTATGTTCAGAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
rJMFF035K04- GGATAATGTTTATGTTCAAAANCTTACCTCTAATGGNGGNGCAAAGGCATATTCCGGNGT
rJMFF050F06- GGATAATGTTTATGTTCAGAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
rJMFF004H21- GGATAATGTTTATGTTCAAAANCTTANCTCTAATGGNGGNGCAAAGGCATATTCCGGCGT
rJMFF024L10- GGATAATGTTTATGTTCAAAANCTTACCTCTAATGGNGGNGCAAAGGCATATTCCGGCGT
____________________________________________________________
consensus GGATAATGTTTATGTTCAAAAGCTTAGCTCTAATGGTGGTGCAAAGGCATATTCCGGCGT
. : . : . : . : . : . :
rJMFF043J06- CTAACCCTGCAAGTCCTCCCAGAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
rJMFF035K04- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
rJMFF050F06- CTAACCCTGCAAGTCCTCCCAGAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
rJMFF004H21- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
rJMFF024L10- CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCNCCNATTC
____________________________________________________________
consensus CTAACCCTGCAAGTCCTCCCAAAACTGGACAGCATGTATCCTTGGGGCTGCCGCCGATTC
. : . : . : . : . : . :
rJMFF043J06- CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCGATCG
rJMFF035K04- CAATGNGNATCANCCCNCCCAGNAAGTCCACNCATGCCCCCAGNTTCAGGGCGTCAATCG
rJMFF050F06- CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCGATCG
rJMFF004H21- CAATGNGGATCACCCCNCCCANNAAGTCCACNCNTGCCCCCAGNTTCAGGGCGTCAATCG
rJMFF024L10- CNATGNGNATCANCCCNCCCAGCAAGTCCACNCATGCCCCCAGNTTCAGGGCGTCAATCG
____________________________________________________________
consensus CGATGTGGATCAGCCCGCCCAGCAAGTCCACGCATGCCCCCAGCTTCAGGGCGTCAATCG
. : . : . : . : . : . :
rJMFF043J06- GGCAAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTC-ACTGGAGGTGGAG
rJMFF035K04- GGNAANTTGGTTGCCCCGGCGGCGGCGGCGGCGGGCACGGNTTTTCA
rJMFF050F06- GGNCAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTC-ACTGGAGGTGGAG
rJMFF004H21- GGNAAATTGGTTGCNCCGGCGGCGGCGGCGGCGGNCACGGNTTTTCAACTGGAGGTGGAG
rJMFF024L10- GGCAANTTGGTTGCCCCGGCGGCGGCGGCGGCGGNCACGGTTTTTCAANTGNAGGTGGAG
JMFF050F06+ G
JMFF043J06+ CGGCGGCGGCGGCGGCGGGCACGGCTTTTCAACTG-AGGTGGAG
____________________________________________________________
consensus GGCAAGTTGGTTGCGCCGGCGGCGGCGGCGGCGGGCACGGCTTTTCAACTGGAGGTGGAG
. : . : . : . : . : . :
rJMFF043J06- GAGGAGGTGG
rJMFF050F06- GAGGAGGTGGGCATGGCTTT
rJMFF004H21- GAGGAGGTGGNCNTGGNTTTTCCACTGGCGGNAAAGGTANTGGAGGCGGCGGTGTACCTA
rJMFF024L10- GAGGAGGTGGGCATGGNTTTTCCACTGGCGGNAAAGGNANTGNAGGCGGCGGTGTACCTA
JMFF050F06+ GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
JMFF035K04+ GTGTAGCTA
JMFF043J06+ GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
____________________________________________________________
consensus GAGGAGGTGGGCATGGCTTTTCCACTGGCGGGAGAGGTAGTGGAGGCGGCGGTGTAGCTA
. : . : . : . : . : . :
rJMFF004H21- CCGGAGGCTTTGGC
rJMFF024L10- CCGGAGGNTTTGGC
JMFF050F06+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
JMFF035K04+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
JMFF043J06+ CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
____________________________________________________________
consensus CCGGAGGCTTTGGCACGTACGGCGGTGGTGTTATTACCACTGGCGGCGGCGGGGGGAGTA
. : . : . : . : . : . :
JMFF050F06+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF035K04+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF024L10+ CGACAGGAGGCGTTG
JMFF043J06+ CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
JMFF035A24+ GCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGNCAGGAGGCGTTG
____________________________________________________________
consensus CTGGCGGGGTCACCACCGGGGGCTTTGGCACGTAAGGCGGTGTCACGACAGGAGGCGTTG
. : . : . : . : . : . :
JMFF050F06+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF035K04+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF004H21+ AACGACCGGAGGTTTGGGAATGTCCGGAGGATGAACCACCG
JMFF024L10+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF043J06+ GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
JMFF035A24+ GGACAATGGGTGGTGCNTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
____________________________________________________________
consensus GGACAATGGGTGGTGGCTTAACGACCGGAGGTTTGGGAATGTACGGAGGATGAACCACCG
. : . : . : . : . : . :
JMFF050F06+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF035K04+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF004H21+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF024L10+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
JMFF043J06+ GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGTGGCGGGTGCA
JMFF035A24+ GCGNTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGTGNCGGGTGCA
____________________________________________________________
consensus GCGGTTTGGGAATGTACGGAGGATGAACCACCGGAGGTTTAGGCACGTGCGGCGGGTGCA
. : . : . : . : . : . :
JMFF050F06+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF035K04+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF004H21+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF024L10+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF043J06+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
JMFF035A24+ CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
____________________________________________________________
consensus CAACCGGAGGTTTGGGTACGTGCGGCGGGTGCACGACCGGAGGTTTGGGTACATGCGGCG
. : . : . : . : . : . :
JMFF050F06+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF035K04+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF004H21+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF024L10+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF043J06+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
JMFF035A24+ GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
____________________________________________________________
consensus GGTGCACTACCGGAGATTTGGGAGGACAGGGCGGCGGCTCGTGATGAACTTTTGGAGGGT
. : . : . : . : . : . :
JMFF050F06+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF035K04+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF004H21+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF024L10+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF043J06+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
JMFF035A24+ GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
____________________________________________________________
consensus GTTTTGGGACCTTTGGGGGAAGTGGTGGTTTAGGGTGGACCTTGGGCGGAGATGGTGGGT
. : . : . : . : . : . :
JMFF050F06+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF035K04+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF004H21+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF024L10+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF043J06+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
JMFF035A24+ AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
____________________________________________________________
consensus AAGGGCAGTATGGGCATGCATGGGCAACCAATAAACTTCCCCATTGAAGAAGGAGAAGAA
. : . : . : . : . : . :
JMFF050F06+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCT
JMFF035K04+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF004H21+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGA
JMFF024L10+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF043J06+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGAC
JMFF035A24+ GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGACAAGT
____________________________________________________________
consensus GCAAAACTTTGCCCAAATGATTCTTCATCTTCAAGAGAGATTAGAGGAATCTTGACAAGT