| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D10 | Sequence | 502 | 007428 (7) | ref|XP_009339426.1| | 8e-05 | PREDICTED: amino acid permease 3-like [Pyrus x bretschneideri] ref|XP_009339427. | 720 | 012473 (8) | ref|XP_010322323.1| | 1e-82 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF017F02 | Sequence | 533 | 007428 (7) | ref|XP_009801366.1| | 1e-10 | PREDICTED: amino acid permease 3-like [Nicotiana sylvestris] | 690 | 012473 (8) | ref|XP_010322323.1| | 5e-80 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF031M21 | Sequence | 545 | 007428 (7) | ref|XP_009609434.1| | 1e-13 | PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis] | 654 | 012473 (8) | ref|XP_010322323.1| | 9e-61 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF031O18 | Sequence | 542 | 007428 (7) | ref|XP_009609434.1| | 1e-13 | PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis] | 716 | 012473 (8) | ref|XP_010322323.1| | 6e-77 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF034P16 | Sequence | 453 | 007428 (7) | 217 | 012473 (8) | ||||||
| JMFF039K07 | Sequence | 478 | 007428 (7) | 617 | 012473 (8) | ref|XP_010322323.1| | 1e-74 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] | |||
| JMFF049J17 | Sequence | 635 | 007428 (7) | ref|XP_009801366.1| | 4e-32 | PREDICTED: amino acid permease 3-like [Nicotiana sylvestris] | 581 | 012473 (8) | ref|XP_009379863.1| | 3e-43 | PREDICTED: amino acid permease 4-like [Musa acuminata subsp. malaccensis] |
This contig is upended
. : . : . : . : . : . :
JMFF049J17+ ACGATAGAGAACAAGATCATCATAGTTGGACCAGCAA
____________________________________________________________
consensus ACGATAGAGAACAAGATCATCATAGTTGGACCAGCAA
. : . : . : . : . : . :
JMFF049J17+ TCCATCCCAACTGTGCCACGGCCCATGCTAAGGACAAAACTCCCGAACCTATAACAGCCG
JMFF031M21+ CAGCCG
JMFF031O18+ CAGCCG
____________________________________________________________
consensus TCCATCCCAACTGTGCCACGGCCCATGCTAAGGACAAAACTCCCGAACCTATAACAGCCG
. : . : . : . : . : . :
JMFF049J17+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF017F02+ TATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF031M21+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF031O18+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF039K07+ GT
JMFF005D10+ TCTCTTGAGACGGCCGTCGTCGT
____________________________________________________________
consensus TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
. : . : . : . : . : . :
JMFF049J17+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF017F02+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTNATCGAGAAATCGAGCA
JMFF031M21+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF031O18+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF039K07+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF005D10+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF034P16+ ACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
____________________________________________________________
consensus CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
. : . : . : . : . : . :
JMFF049J17+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF017F02+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTNTCTCCCATCTTCAATT
JMFF031M21+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF031O18+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF039K07+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF005D10+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF034P16+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
____________________________________________________________
consensus CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
. : . : . : . : . : . :
JMFF049J17+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF017F02+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF031M21+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF031O18+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF039K07+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF005D10+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF034P16+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
____________________________________________________________
consensus TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
. : . : . : . : . : . :
JMFF049J17+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF017F02+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTACAAGTTTTGTTATAAC
JMFF031M21+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF031O18+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF039K07+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF005D10+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF034P16+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
____________________________________________________________
consensus TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
. : . : . : . : . : . :
JMFF049J17+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF017F02+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF031M21+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF031O18+ ACTGGACCACTA--CTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF039K07+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF005D10+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF034P16+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
____________________________________________________________
consensus ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
. : . : . : . : . : . :
JMFF049J17+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF017F02+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF031M21+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF031O18+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF039K07+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF005D10+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF034P16+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
____________________________________________________________
consensus CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
. : . : . : . : . : . :
JMFF049J17+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF017F02+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF031M21+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF031O18+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF039K07+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF005D10+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF034P16+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
____________________________________________________________
consensus TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
. : . : . : . : . : . :
JMFF049J17+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF017F02+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTG
JMFF031M21+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF031O18+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF039K07+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTT
JMFF005D10+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF034P16+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGCAG
____________________________________________________________
consensus CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGCAG