Contig 007426:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034D12Sequence593007426 (2)752007426 (2)ref|XP_009759280.1|3e-13PREDICTED: uncharacterized protein LOC104211844 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMFF034D12-                                                 ATTACGCCAACAAATATAGGT
                      ____________________________________________________________
consensus                                                    ATTACGCCAACAAATATAGGT
 
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rJMFF034D12-          TTTGTACATACAATGATATAATGATTGATCACCAGATCAGATATATTAAAATCAGAAGCA
                      ____________________________________________________________
consensus             TTTGTACATACAATGATATAATGATTGATCACCAGATCAGATATATTAAAATCAGAAGCA
 
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rJMFF034D12-          AAATAATCTAGTAAAGAATTTAACCCTACACCTTTCATCCTTCAATTTTGTGTTGTTTCG
                      ____________________________________________________________
consensus             AAATAATCTAGTAAAGAATTTAACCCTACACCTTTCATCCTTCAATTTTGTGTTGTTTCG
 
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rJMFF034D12-          ATTTTGAAAATTATTTTTGATGCCACCTTTTACAATCACTTGTCGCTTCAAAACATCCAT
                      ____________________________________________________________
consensus             ATTTTGAAAATTATTTTTGATGCCACCTTTTACAATCACTTGTCGCTTCAAAACATCCAT
 
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rJMFF034D12-          CGTATACTCCCGTAACCCAGTTATATTCAAAATTACTTGAGAAATTCTTCGTCTGCAATG
                      ____________________________________________________________
consensus             CGTATACTCCCGTAACCCAGTTATATTCAAAATTACTTGAGAAATTCTTCGTCTGCAATG
 
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rJMFF034D12-          AGCACAGCCCAGGTTTGCATTTACTACCACCACCTGGAACTAACAACACACAAAACTATC
                      ____________________________________________________________
consensus             AGCACAGCCCAGGTTTGCATTTACTACCACCACCTGGAACTAACAACACACAAAACTATC
 
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rJMFF034D12-          TAATAAGAAAGTCAGAAAAAGGATACATATAACATATATACATACATAATTCATCATAAT
                      ____________________________________________________________
consensus             TAATAAGAAAGTCAGAAAAAGGATACATATAACATATATACATACATAATTCATCATAAT
 
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rJMFF034D12-          CCCCACACACTGTCCGATGATATACTAGGAAAAAAAGACAATAACTGAGAGAGCTTACAG
                      ____________________________________________________________
consensus             CCCCACACACTGTCCGATGATATACTAGGAAAAAAAGACAATAACTGAGAGAGCTTACAG
 
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rJMFF034D12-          ACGGGATCTTGAGATTAGCAACGTTAAACAGGGCTTGTTTATGAGTTTTCTCCATCTATG
                      ____________________________________________________________
consensus             ACGGGATCTTGAGATTAGCAACGTTAAACAGGGCTTGTTTATGAGTTTTCTCCATCTATG
 
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rJMFF034D12-          GATCTTTCTTCTGCAATGAGCATTACCCAGAGAAGAATGAACCTAACTCAGTTGTTTGCC
                      ____________________________________________________________
consensus             GATCTTTCTTCTGCAATGAGCATTACCCAGAGAAGAATGAACCTAACTCAGTTGTTTGCC
 
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rJMFF034D12-          TAAAACCTGGTGCTTAAATTATATATAATCCTCCAGAATTAATAATAAGAAAAATTGTAT
                      ____________________________________________________________
consensus             TAAAACCTGGTGCTTAAATTATATATAATCCTCCAGAATTAATAATAAGAAAAATTGTAT
 
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rJMFF034D12-          TTTTGGTCCTTCAGTTATACCCGTGATACAGACTTAGTGCCTGAGTTATATGCGTTACCA
JMFF034D12+                 TCCTTCAGTTATACCCGTGATACAGACTTAGTGCCTGAGTTATATGCGTTACCA
                      ____________________________________________________________
consensus             TTTTGGTCCTTCAGTTATACCCGTGATACAGACTTAGTGCCTGAGTTATATGCGTTACCA
 
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rJMFF034D12-          TCTTTAACCCCTAAGTTGTATATGGAGTGACAATTTTAATCATTGGAAGCCTTGAAGGAC
JMFF034D12+           TCTTTAACCCNTAAGTTGTATATGGAGTGACAATTTTAATCATT-GAAGCCTTGAAGGAC
                      ____________________________________________________________
consensus             TCTTTAACCCCTAAGTTGTATATGGAGTGACAATTTTAATCATTGGAAGCCTTGAAGGAC
 
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rJMFF034D12-          CAATATGGACT                                                 
JMFF034D12+           CAATATGGACTAAAATGGTCACTTGTACATAACTTAGGGGTTAAAATGACCAGACAATAT
                      ____________________________________________________________
consensus             CAATATGGACTAAAATGGTCACTTGTACATAACTTAGGGGTTAAAATGACCAGACAATAT
 
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JMFF034D12+           AATTTAGGGACTAAATTTGTACCACTGTACAGGTATAACCGAAGGACAAAAAATGCAATT
                      ____________________________________________________________
consensus             AATTTAGGGACTAAATTTGTACCACTGTACAGGTATAACCGAAGGACAAAAAATGCAATT
 
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JMFF034D12+           TTTTCATATAAAAATAATAGTTTAGTTTATCTAAACGCAGATAATTAAAATATGTGTTAA
                      ____________________________________________________________
consensus             TTTTCATATAAAAATAATAGTTTAGTTTATCTAAACGCAGATAATTAAAATATGTGTTAA
 
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JMFF034D12+           GTTGTGTGCATATGCAAAGCATTCACATATATATATTGAATTCAAAATAAAGCAGCTAGC
                      ____________________________________________________________
consensus             GTTGTGTGCATATGCAAAGCATTCACATATATATATTGAATTCAAAATAAAGCAGCTAGC
 
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JMFF034D12+           TGCAGACTAAAGAAGGGGACGAAGAATTGGCATTGTGTGGCCACCAATAACGAACCTCCG
                      ____________________________________________________________
consensus             TGCAGACTAAAGAAGGGGACGAAGAATTGGCATTGTGTGGCCACCAATAACGAACCTCCG
 
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JMFF034D12+           ATCTTCATCAGCTGGCTGGTGGTCTTCATGTTGCCATCAATTAAAGACAAAATATATATA
                      ____________________________________________________________
consensus             ATCTTCATCAGCTGGCTGGTGGTCTTCATGTTGCCATCAATTAAAGACAAAATATATATA
 
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JMFF034D12+           ATATTGTAAGTCAGTAGAGACAAGAGGAGATTAGTATGAGAGATTAGGAAATTTTGATTA
                      ____________________________________________________________
consensus             ATATTGTAAGTCAGTAGAGACAAGAGGAGATTAGTATGAGAGATTAGGAAATTTTGATTA
 
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JMFF034D12+           ATTAATCGGTGTGGGAAGTATGATATTTTAGCCCGTGAATTGAAGCAGCTGGTTGCTGAT
                      ____________________________________________________________
consensus             ATTAATCGGTGTGGGAAGTATGATATTTTAGCCCGTGAATTGAAGCAGCTGGTTGCTGAT