Contig 007423:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043D20-                                                                ACCCTG
                      ____________________________________________________________
consensus                                                                   ACCCTG
 
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rJMFF043D20-          GAGAGTTTTTTTTTTTTTTTTCCTCACATGAATAAGTGTATAACCCAACAAAAAGTGAAG
                      ____________________________________________________________
consensus             GAGAGTTTTTTTTTTTTTTTTCCTCACATGAATAAGTGTATAACCCAACAAAAAGTGAAG
 
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rJMFF043D20-          AATCATCACCAAAAAGATACATTTACACCTAAATTAAAAGAATCACAAATCTAAATTACA
rJMFF033F24-           ATCATCACCANAAAGATACATTTACACCTAAATTAAAAGAATCACAAATCTAAATTACA
                      ____________________________________________________________
consensus             AATCATCACCAAAAAGATACATTTACACCTAAATTAAAAGAATCACAAATCTAAATTACA
 
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rJMFF043D20-          AATGGTATCATCATTTTGATTTTGATGTCATTTTTCTTAATAACTACCTAAAAAAGAAAA
rJMFF033F24-          AATGGTATCATCATTTTGATTTTGATGTCATTTTTCTTAATAACTACCTAAAAAAGAAAA
                      ____________________________________________________________
consensus             AATGGTATCATCATTTTGATTTTGATGTCATTTTTCTTAATAACTACCTAAAAAAGAAAA
 
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rJMFF043D20-          ATAAAAATTTCACAAATTTACCCCCCAAAAAAACCCGGCATTGAATTTGTGAATTCCAGA
rJMFF033F24-          ATAAAAATTTCACAAATTTACCCCCCAAAAAAACCCGGCATTGAATTTGTGAATTCCAGA
                      ____________________________________________________________
consensus             ATAAAAATTTCACAAATTTACCCCCCAAAAAAACCCGGCATTGAATTTGTGAATTCCAGA
 
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rJMFF043D20-          TCAAACCCGAGACGCAGCGGCCGGAGCGGCGGCAGCTTTTGTGGCAGCGCCCGTCAACAA
rJMFF033F24-          TCAAACCCGAGACGCAGCGGCCGGAGCGGCGGCAGCTTTTGTGGCAGCGCCCGTCAACAA
                      ____________________________________________________________
consensus             TCAAACCCGAGACGCAGCGGCCGGAGCGGCGGCAGCTTTTGTGGCAGCGCCCGTCAACAA
 
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rJMFF043D20-          GGAGATGATACCCGTGGGGGGAGCCTGAGCCTGAGCCTGTTGTTCTTCGAAGTAAAAATC
rJMFF033F24-          GGAGATGATACCCGTGGGGGGAGCCTGAGCCTGAGCCTGTTGTTCTTCGAAGTAGAAATC
                      ____________________________________________________________
consensus             GGAGATGATACCCGTGGGGGGAGCCTGAGCCTGAGCCTGTTGTTCTTCGAAGTAGAAATC
 
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rJMFF043D20-          TTCGGGGACGCGGAAAACTGAATGGGCGCAAACAATGGCGACGCTGACGAGCAATGAGGT
rJMFF033F24-          TTCGGGGACGCGGAAAACTGAATGGGCGCAAACAATGGCGACGCTGACGAGCAATGAGGT
JMFF043D20+             CGGGGACGCGGAAAACTGAATGGGCGCAAACAATGGCGACGCTGACGAGCAATGAGGT
                      ____________________________________________________________
consensus             TTCGGGGACGCGGAAAACTGAATGGGCGCAAACAATGGCGACGCTGACGAGCAATGAGGT
 
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rJMFF043D20-          GACGAGAAGGGGTCCCACGCTGGTAAGGAAAAGGACTAAGACGGTGGAGAGAATGAGGGC
rJMFF033F24-          GACGAGAAGGGGTCCCACGCTGGTAAGGAAAAGGACTAAGACGGTGGAGAGAATGAGGGC
JMFF043D20+           GACGAGAAGGGGTCCCACGCTGGTAAGGAAAAGGACTAAGACGGTGGAGAGAATGAGGGC
JMFF033F24+                                  TAAGGAAAAGGACTAAGACGGTGGAGAGAATGAGGGC
                      ____________________________________________________________
consensus             GACGAGAAGGGGTCCCACGCTGGTAAGGAAAAGGACTAAGACGGTGGAGAGAATGAGGGC
 
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rJMFF043D20-          GGCGAGGATTTCGAAATCGGAGAAGACGCGGCCGAAGATGACGAGAGGCTGATCGACGGG
rJMFF033F24-          GGCGAGGATTTCGAAATCGGAGAAGACGCGGCCGAAGATGACGAGAGGCTGATCGACGGG
JMFF043D20+           GGCGAGGATTTCGAAATCGGAGAAGACGCGGCCGAAGATGACGAGAGGCTGATCGACGGG
JMFF033F24+           GGCGAGGATTTCGAAATCGGAGAAGACGCGGCCGAAGATGACGAGAGGCTGATCGACGGG
                      ____________________________________________________________
consensus             GGCGAGGATTTCGAAATCGGAGAAGACGCGGCCGAAGATGACGAGAGGCTGATCGACGGG
 
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rJMFF043D20-          GCGGA                                                       
rJMFF033F24-          GCGGAAGACGTAGAGGAAGAGCCAGGCGGCGAGGAGGGCGAGGAGGAGGCAGAGGGTGAA
JMFF043D20+           GCGGAAGACGTAGAGGAAGAGCCAGGCGGCGAGGAGGGCGAGGAGGAGGCAGAGGGTGAA
JMFF033F24+           GCGGAAGACGTAGAGGAAGAGCCAGGCGGCGAGGAGGGCGAGGAGGAGGCAGAGGGTGAA
                      ____________________________________________________________
consensus             GCGGAAGACGTAGAGGAAGAGCCAGGCGGCGAGGAGGGCGAGGAGGAGGCAGAGGGTGAA
 
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rJMFF033F24-          AGGGTTGCTGAGGAGCGATAATCCGATCACGGCGGCGATGATGACGTAGTAGTTTGTCCG
JMFF043D20+           AGGGTTGCTGAGGAGCGATAATCCGATCACGGCGGCGATGATGACGTAGTAGTTTGTCCG
JMFF033F24+           AGGGTTGCTGAGGAGCGATAATCCGATCACGGCGGCGATGATGACGTAGTAGTTTGTCCG
                      ____________________________________________________________
consensus             AGGGTTGCTGAGGAGCGATAATCCGATCACGGCGGCGATGATGACGTAGTAGTTTGTCCG
 
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rJMFF033F24-          GAAATACGCGTAGTTCTTGCGGATGCGGAGGGTGGCTTCGGATAACGATTCGGGCTTGGA
JMFF043D20+           GAAATACGCGTAGTTCTTGCGGATGCGGAGGGTGGCTTCGGATAACGATTCGGGCTTGGA
JMFF033F24+           GAAATACGCGTAGTTCTTGCGGATGCGGAGGGTGGCTTCGGATAACGATTCGGGCTTGGA
                      ____________________________________________________________
consensus             GAAATACGCGTAGTTCTTGCGGATGCGGAGGGTGGCTTCGGATAACGATTCGGGCTTGGA
 
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rJMFF033F24-          GANGGCGGAACGGTCGACGAGCTCGCGCCAGGGGCGGCGCTGGGAAANGCCATTGCGTAC
JMFF043D20+           GAGGGCGGAACGGTCGACGAGCTCGCGCCAGGGGCGGCGCTGGGAAAGGCCATTGCGTAC
JMFF033F24+           GAGGGCGGAACGGTCGACGAGCTCGCGCCAGGGGCGGCGCTGGGAAAGGCCATTGCGTAC
                      ____________________________________________________________
consensus             GAGGGCGGAACGGTCGACGAGCTCGCGCCAGGGGCGGCGCTGGGAAAGGCCATTGCGTAC
 
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rJMFF033F24-          GTTCT                                                       
JMFF043D20+           GTTCTCGATGATCTGGTTAAGGAAGGAGCGGAAAGCCGGGTTGGGAACGAAGGCGGCGAC
JMFF033F24+           GTTCTCGATGATCTGGTTAAGGAAGGAGCGGAAAGCCGGGTTGGGAACGAAGGCGGCGAC
                      ____________________________________________________________
consensus             GTTCTCGATGATCTGGTTAAGGAAGGAGCGGAAAGCCGGGTTGGGAACGAAGGCGGCGAC
 
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JMFF043D20+           GACGCCGGCGTCAGAGGGGGCCACGGCGGTGGTGGGTTGGCGGTTGGAAGTAGGGACAAC
JMFF033F24+           GACGCCGGCGTCAGAGGGGGCCACGGCGGTGGTGGGTTGGCGGTTGGAAGTAGGGACAAC
                      ____________________________________________________________
consensus             GACGCCGGCGTCAGAGGGGGCCACGGCGGTGGTGGGTTGGCGGTTGGAAGTAGGGACAAC
 
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JMFF043D20+           CGCGGGCGTGGCCATTGCTTTATTCTTTGGAACCTATGATACTCTCAACTAT        
JMFF033F24+           CGCGGGCGTGGCCATTGCTTTATTCTTTGGAACCTATGATACTCTCAACTATTGTAATTT
                      ____________________________________________________________
consensus             CGCGGGCGTGGCCATTGCTTTATTCTTTGGAACCTATGATACTCTCAACTATTGTAATTT