| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005E10 | Sequence | 536 | 007421 (12) | ref|NP_001266128.1| | 7e-40 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | 747 | 013863 (13) | gb|AAX20031.1| | 4e-83 | RING-finger protein [Capsicum annuum] |
| JMFF019N13 | Sequence | 575 | 007421 (12) | ref|NP_001266128.1| | 1e-68 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | 748 | 013863 (13) | gb|AAX20031.1| | 4e-70 | RING-finger protein [Capsicum annuum] |
| JMFF033C16 | Sequence | 520 | 007421 (12) | 730 | 013863 (13) | ref|XP_002515058.1| | 2e-33 | copine, putative [Ricinus communis] gb|EEF47612.1| copine, putative [Ricinus com | |||
| JMFF034B20 | Sequence | 398 | 007421 (12) | 739 | 013863 (13) | gb|AAX20031.1| | 8e-65 | RING-finger protein [Capsicum annuum] | |||
| JMFF037G22 | Sequence | 544 | 007421 (12) | 651 | 013863 (13) | ref|XP_006338634.1| | 3e-32 | PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Solanum tuberosum] | |||
| JMFF041C03 | Sequence | 647 | 007421 (12) | ref|NP_001266128.1| | 3e-84 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | 380 | 013863 (13) | ref|XP_011101825.1| | 3e-27 | PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X2 [Sesamum indicum] |
| JMFF046B23 | Sequence | 563 | 007421 (12) | ref|NP_001266128.1| | 8e-64 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | 425 | 013863 (13) | ref|XP_002526974.1| | 6e-25 | copine, putative [Ricinus communis] gb|EEF35461.1| copine, putative [Ricinus com |
| JMFF050N10 | Sequence | 626 | 007421 (12) | ref|NP_001266128.1| | 2e-82 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | 511 | 013863 (13) | ref|XP_002526974.1| | 2e-24 | copine, putative [Ricinus communis] gb|EEF35461.1| copine, putative [Ricinus com |
| JMFS152B06 | Sequence | 602 | 007421 (12) | ref|NP_001266128.1| | 7e-07 | E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum] ref|XP_010315864.1 | |||||
| JMSF005I03 | Sequence | 208 | 007421 (12) | ||||||||
| JMSF013B19 | Sequence | 253 | 007421 (12) | 805 | 013863 (13) | gb|AAX20031.1| | 2e-85 | RING-finger protein [Capsicum annuum] | |||
| JMSF051A17 | Sequence | 640 | 007421 (12) | 724 | 013863 (13) | gb|AAX20031.1| | 5e-91 | RING-finger protein [Capsicum annuum] | |||
This contig is upended
. : . : . : . : . : . :
JMFF050N10+ GCAATTTCCCTATATGNAGATAAAACTTCCTCAAAACCAT
JMFF041C03+ GCAAGTTTTAGTCGGGGGGCAATTTCCCTATATTGAGATAAAACTTCCTCAAAACCAT
____________________________________________________________
consensus GCAAGTTTTAGTCGGGGGGCAATTTCCCTATATTGAGATAAAACTTCCTCAAAACCAT
. : . : . : . : . : . :
JMFF019N13+ TCATCAGGATAGAAACTGAATACATCTTGATCATGAGTTGATGCATCTC
JMFF046B23+ ATGCATCTC
JMFF050N10+ TGCAAAATCTTTCATCAGGATAGAAACTGAATACATCTTGATCATGAGTTGATGCATCTC
JMFF041C03+ TGCAAAATCTTTCATCAGGATAGAAACTGAATACATCTTGATCATGAGTTGATGCATCTC
____________________________________________________________
consensus TGCAAAATCTTTCATCAGGATAGAAACTGAATACATCTTGATCATGAGTTGATGCATCTC
. : . : . : . : . : . :
JMFF019N13+ CAAATCCAAAACAAGGGATTAAGTTATCATCATCAAAGGCAGCCAAAGTTTTCCCAATAA
JMFF046B23+ CAAATCCAAAACAAGGGATTAAGTNATCATCATCAAAGGCAGCCAAAGTTTTCCCAATAA
JMFF050N10+ CAAATCCAAAACAAGGGATTAAGTTATCATCATCAAAGGCAGCCAAAGTTTTCCCAATAA
JMFF041C03+ CAAATCCAAAACAAGGGATTAAGTTATCATCATCAAAGGCAGCCAAAGTTTTCCCAATAA
____________________________________________________________
consensus CAAATCCAAAACAAGGGATTAAGTTATCATCATCAAAGGCAGCCAAAGTTTTCCCAATAA
. : . : . : . : . : . :
JMFF019N13+ TGGAGATTGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
JMFF046B23+ TGGAGATTGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
JMFF050N10+ TGGAGATTGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
JMFF041C03+ TGGAGATTGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
JMFF005E10+ TGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
____________________________________________________________
consensus TGGAGATTGCTTGCTCATAGGGATTAAGACCATGTCCAATGTTATGTAAGCTTCGCCCAT
. : . : . : . : . : . :
JMFF019N13+ TGAATGACTTCTTACCCGTCCATTCATCGCTCTTTGTGAAATCAATACCAACAATTAGAT
JMFF046B23+ TGAATGACTTCTTACCCGTCCATTCATTGCTCTTTGTGAAATCAATACCAACAATTAGAT
JMFF050N10+ TGAATGACTTCTTACCCGTCCATTCATTGCTCTTTGTGAAATCAATACCAACAATTAGAT
JMFF041C03+ TGAATGACTTCTTACCCGTCCATTCATTGCTCTTTGTGAAATCAATACCAACAATTAGAT
JMFF005E10+ TGAATGACTTCTTACCCGTCCATTCATTGCTCTTTGTGAAATCAATACCAACAATTAGAT
____________________________________________________________
consensus TGAATGACTTCTTACCCGTCCATTCATTGCTCTTTGTGAAATCAATACCAACAATTAGAT
. : . : . : . : . : . :
JMFF019N13+ TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
JMFF046B23+ TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
JMFF050N10+ TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
JMFF041C03+ TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
JMFF005E10+ TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
JMFS152B06+ TACCTCCTCCAATGAATTGTAAT
____________________________________________________________
consensus TGGATGACTCGAGTCCAGCACGTGCAAGAGCTTCAGTTACCTCCTCCAATGAATTGTAAT
. : . : . : . : . : . :
JMFF019N13+ TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFF046B23+ TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFF050N10+ TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFF041C03+ TATCTGCTATCCTTGAACATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFF005E10+ TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFS152B06+ TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
JMFF037G22+ CGGTCAAGCNTCCTCTGCGGCGGCGCATGATTACGAG
JMSF051A17+ CGGCGCATGATTCCGAG
____________________________________________________________
consensus TATCTGCTATCCTTGAATATCTCCGGTCAAGCCTCCTCTGCGGCGGCGCATGATTCCGAG
. : . : . : . : . : . :
JMFF019N13+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF046B23+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF050N10+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF041C03+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF005E10+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF034B20+ TGGGGAGGAGGAGGGGCATATG
JMFS152B06+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMFF037G22+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
JMSF051A17+ AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
____________________________________________________________
consensus AGGCAAAATCTTGAGAAGGCGGGGGATACTGCTGCTCTTGGGGAGGAGGAGGGGCATATG
. : . : . : . : . : . :
JMFF019N13+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF046B23+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF050N10+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF041C03+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF005E10+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF034B20+ AAGGATAAGCATGCTGAACNGGGTAATTGTAGCTNTNTTGTGGTTGAGGCGGATAAGCTG
JMFS152B06+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMFF037G22+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
JMSF051A17+ AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
____________________________________________________________
consensus AAGGATAAGCATGCTGAACAGGGTAATTGTAGCTCTCTTGTGGTTGAGGCGGATAAGCTG
. : . : . : . : . : . :
JMFF019N13+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF046B23+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF050N10+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF041C03+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF005E10+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF034B20+ TTTGAGGATATTNGTAATTCCCCGAAGACGAAGTTGACCTNGAAGCTTGCCTCCAACTAT
JMSF013B19+ T
JMFS152B06+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMFF037G22+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
JMSF051A17+ TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
____________________________________________________________
consensus TTTGAGGATATTCGTAATTCCACGAAGACGAAGTTGACCTCGAAGCTTGCCTCCAACTAT
. : . : . : . : . : . :
JMFF019N13+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTAC
JMFF046B23+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTACTAC
JMFF050N10+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTACTAC
JMFF041C03+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGATCCGACAAC
JMFF005E10+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTCTACGAAGAT
JMFF034B20+ CGTCCCTAGAACTNTTCCCTCCCATCAATTCAATTNCCGCTCCTACAACTTTACGAAGAT
JMSF013B19+ CGTCCCTAGAACTNTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTNTACGAAGAT
JMSF005I03+ TACGAAGAT
JMFS152B06+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTCTACGAAGAT
JMFF037G22+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTCTACGAAGAT
JMSF051A17+ CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTCTACGAAGAT
JMFF033C16+ CCCATCAATTCAATTACCGCTCNTACAACTCTACGAAGAT
____________________________________________________________
consensus CGTCCCTAGAACTCTTCCCTCCCATCAATTCAATTACCGCTCCTACAACTCTACGAAGAT
. : . : . : . : . : . :
JMFF005E10+ CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
JMFF034B20+ CCTTAATTTTTCAGATAAAAACTTTCAGCCGTCCAGAAACAAAAACCNCAACGAATCCGA
JMSF013B19+ CCTTAATTTCTCAGATAAAAACTNTCAGCCGTCCAGAAACAAAAACCNCAACGAATCCGA
JMSF005I03+ CCTTAATTTCTCAGATAAAAACTNTCAGCCGTCCAGAAACAAAAACCNCAACGAATNCGA
JMFS152B06+ CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
JMFF037G22+ CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
JMSF051A17+ CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
JMFF033C16+ CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
____________________________________________________________
consensus CCTTAATTTCTCAGATAAAAACTCTCAGCCGTCCAGAAACAAAAACCACAACGAATCCGA
. : . : . : . : . : . :
JMFF005E10+ AAC
JMFF034B20+ AAC
JMSF013B19+ AAC
JMSF005I03+ AAC
JMFS152B06+ AACACGTGGCAGACAATCCAGAAGAGTTCGGCGGCTATACAGCAAAAAGAAAAAGACTTT
JMFF037G22+ AACACGTGGCAGACAATCCAGAAGAGTTCGGCGGCTATACAGCAAAAAGAAAAAGACTTT
JMSF051A17+ AACACGTGGCAGACAATCCAGAAGAGTTCGGCGGCTATACAGCAAAAAGAAAAAGACTTT
JMFF033C16+ AACACGTGGCAGACAATCCAGAAGAGTTCGGCGGCTATACAGCAAAAAGAAAAAGACTTT
____________________________________________________________
consensus AACACGTGGCAGACAATCCAGAAGAGTTCGGCGGCTATACAGCAAAAAGAAAAAGACTTT
. : . : . : . : . : . :
JMFF037G22+ TCTTATACTGTAGTTTCCGGAAAGACCCCCTCAACGACCGAGACGAATTTATATTACTTT
JMSF051A17+ TCTTATACTGTAGTTTCCGGAAAGACCCCCTCAACGACCGAGACGAATTTATATTACTTT
JMFF033C16+ TCTTATACTGTAGTTTCCGGAAAGACCCCCTCAACGACCGAGACGAATTTATATTACTTT
____________________________________________________________
consensus TCTTATACTGTAGTTTCCGGAAAGACCCCCTCAACGACCGAGACGAATTTATATTACTTT
. : . : . : . : . : . :
JMFF037G22+ TCCGGCCAAATGATGAAATCAAACATTGTCGTGCACAGCATGCC
JMSF051A17+ TCCGGCCAAATGATGAAATCAAACATTGTCGTGCACAGCATGCC
JMFF033C16+ TCCGGCCAAATGATGAAATCAAACATTGTCGTGCACAGCATGCCAAATTCAAGACTTAAC
____________________________________________________________
consensus TCCGGCCAAATGATGAAATCAAACATTGTCGTGCACAGCATGCCAAATTCAAGACTTAAC
. : . : . : . : . : . :
JMFF033C16+ CAGAACGAACACAACTGAGATCTGAGCAGTTAGTTCATCTGCATTCTTTAAATATATGAT
____________________________________________________________
consensus CAGAACGAACACAACTGAGATCTGAGCAGTTAGTTCATCTGCATTCTTTAAATATATGAT
. : . : . : . : . : . :
JMFF033C16+ GGAATGGCGAAGGAAGCCAGCGAGAACACACCTGGGCAATAGACAACGGAATCTCTACTG
____________________________________________________________
consensus GGAATGGCGAAGGAAGCCAGCGAGAACACACCTGGGCAATAGACAACGGAATCTCTACTG
. : . : . : . : . : . :
JMFF033C16+ CATTTTCGTCGTGGTGTTAGCACTCGATTTTTCAAAATTATTTGCGGGGAAATTGGTAGA
____________________________________________________________
consensus CATTTTCGTCGTGGTGTTAGCACTCGATTTTTCAAAATTATTTGCGGGGAAATTGGTAGA
. : . : . : . : . : . :
JMFF033C16+ TCGAATTTCGAATCGTTTGAAAATTTTCAGCCTCGTTGGAAAAGATTGAGGGGAAAAGGT
____________________________________________________________
consensus TCGAATTTCGAATCGTTTGAAAATTTTCAGCCTCGTTGGAAAAGATTGAGGGGAAAAGGT