Contig 007415:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031M23Sequence588007415 (2)gb|KJB77816.1|6e-100hypothetical protein B456_012G159000 [Gossypium raimondii] gb|KJB77817.1| hypoth772009721 (2)ref|XP_011070505.1|1e-69PREDICTED: protein NRT1/ PTR FAMILY 8.3-like [Sesamum indicum]
JMFF039I08Sequence517007415 (2)gb|KJB77816.1|2e-63hypothetical protein B456_012G159000 [Gossypium raimondii] gb|KJB77817.1| hypoth694009721 (2)gb|EYU35700.1|2e-57hypothetical protein MIMGU_mgv1a0209461mg, partial [Erythranthe guttata]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF031M23+                       TTCTGATGGATCAGTGTCATCAAACTGATCAGCACCGAATGATGAAAC
                      ____________________________________________________________
consensus                         TTCTGATGGATCAGTGTCATCAAACTGATCAGCACCGAATGATGAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+                                 CCTAGCGCTATCAGATAGAGGCCAAGAAAGAATACAGC
JMFF031M23+           ACACGGTTTAATCCCACCGGTTCCTAGCGCTATCAGATAGAGGCCAAGAAAGAATACAGC
                      ____________________________________________________________
consensus             ACACGGTTTAATCCCACCGGTTCCTAGCGCTATCAGATAGAGGCCAAGAAAGAATACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           ATTCTGGGCAGGAGTAGCAGAAGGGCACACAGAGCCCTCACACCCAGCAGGCCTTAAAGC
JMFF031M23+           ATTCTGGGCAGGAGTAGCAGAAGGGCACACAGAGCCCTCACACCCAGCAGGCCTTAAAGC
                      ____________________________________________________________
consensus             ATTCTGGGCAGGAGTAGCAGAAGGGCACACAGAGCCCTCACACCCAGCAGGCCTTAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           AGGAACAGAAGCTGATAGAGTCAATGTGCACATTCCAATGAAATAAATGGTT--GAAGGC
JMFF031M23+           AGGAACAGAAGCTGATAGAGTCAATGTGCACATTCCAATGAAATAAATGGTTGAGAAGGC
                      ____________________________________________________________
consensus             AGGAACAGAAGCTGATAGAGTCAATGTGCACATTCCAATGAAATAAATGGTTGAGAAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           AGCAATGGTCCAATATCTTCCCCAGTATGCATCTGCCAGGAAAGCTCCAATAAGGGGAGT
JMFF031M23+           AGCAATGGTCCAATATCTTCCCCAGTATGCATCTGCCAGGAAAGCTCCAATAAGGGGAGT
                      ____________________________________________________________
consensus             AGCAATGGTCCAATATCTTCCCCAGTATGCATCTGCCAGGAAAGCTCCAATAAGGGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           AAGGTAACAGGTGCCTGCCCAAGTGGTGATGTTTGTAGCAGCAGAGGCATTTCCTTCATG
JMFF031M23+           AAGGTAACAGGTGCCTGCCCAAGTGGTGATGTTTGTAGCAGCAGAGGCATTTCCTTCATG
                      ____________________________________________________________
consensus             AAGGTAACAGGTGCCTGCCCAAGTGGTGATGTTTGTAGCAGCAGAGGCATTTCCTTCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           CAAATATTTTGTGAGATAGCTCACAAGATTTATGGCAATCCCATAGTAGGCCAACCGTTC
JMFF031M23+           CAAATATTTTGTGAGATAGCTCACAAGATTTATGGCAATCCCATAGTAGGCCAACCGTTC
                      ____________________________________________________________
consensus             CAAATATTTTGTGAGATAGCTCACAAGATTTATGGCAATCCCATAGTAGGCCAACCGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039I08+           ACAACATTCAGTACTAAGTATAAAGGGACAAGCTTTCCAGGTTCCAGTA           
JMFF031M23+           ACAACATTCAGTACTAAGTATAAAGGGACAAGCTTTCCAGGTTCCAGTATTTGCTTTTAG
                      ____________________________________________________________
consensus             ACAACATTCAGTACTAAGTATAAAGGGACAAGCTTTCCAGGTTCCAGTATTTGCTTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF031M23+           AACAGGGTTCCCCTTAATGTCAACTGAAGCATCTCCTGCATAGATTTTGCAGTTTTGTGT
                      ____________________________________________________________
consensus             AACAGGGTTCCCCTTAATGTCAACTGAAGCATCTCCTGCATAGATTTTGCAGTTTTGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF031M23+           CTGTGGAAGAAGAAGATGGTGTTCTAAGAGCAATGTGTCTTCTTGATGAGTCTCCATTAC
                      ____________________________________________________________
consensus             CTGTGGAAGAAGAAGATGGTGTTCTAAGAGCAATGTGTCTTCTTGATGAGTCTCCATTAC