| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006L05 | Sequence | 481 | 007413 (10) | ref|NP_001234317.1| | 1e-49 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | 810 | 006967 (6) | ref|XP_009789452.1| | 2e-65 | PREDICTED: beta-galactosidase 3 [Nicotiana sylvestris] |
| JMFF008A20 | Sequence | 478 | 007413 (10) | ref|NP_001234317.1| | 7e-50 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | 632 | 006967 (6) | ref|XP_009789452.1| | 4e-33 | PREDICTED: beta-galactosidase 3 [Nicotiana sylvestris] |
| JMFF031H19 | Sequence | 480 | 007413 (10) | ref|NP_001234317.1| | 4e-49 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | 672 | 006967 (6) | ref|XP_002534130.1| | 9e-51 | beta-galactosidase, putative [Ricinus communis] gb|EEF28247.1| beta-galactosidas |
| JMFF046B19 | Sequence | 516 | 007413 (10) | ref|NP_001234317.1| | 1e-58 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | 446 | 006967 (6) | |||
| JMFS048C04 | Sequence | 597 | 007413 (10) | ref|NP_001234317.1| | 1e-83 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | |||||
| JMFS071H11 | Sequence | 640 | 007413 (10) | gb|KHF97862.1| | 6e-117 | Beta-galactosidase 3 [Gossypium arboreum] gb|KHF97863.1| Beta-galactosidase 3 [G | |||||
| JMFS094D01 | Sequence | 606 | 007413 (10) | gb|KHF97862.1| | 2e-84 | Beta-galactosidase 3 [Gossypium arboreum] gb|KHF97863.1| Beta-galactosidase 3 [G | |||||
| JMFS118G10 | Sequence | 621 | 007413 (10) | ref|NP_001234317.1| | 2e-86 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | |||||
| JMFS151D02 | Sequence | 613 | 007413 (10) | ref|XP_006340680.1| | 2e-91 | PREDICTED: beta-galactosidase 3-like [Solanum tuberosum] | |||||
| JMFS163D07 | Sequence | 608 | 007413 (10) | ref|NP_001234317.1| | 4e-83 | TBG6 protein precursor [Solanum lycopersicum] gb|AAF70825.1|AF154424_1 putative | |||||
This contig is upended
. : . : . : . : . : . :
JMFS071H11+ GC
____________________________________________________________
consensus GC
. : . : . : . : . : . :
JMFS071H11+ ATCTCTTCCTTGCACATCACCCATGGGACTCCTGTGTTCGTCTCAAGAGCCATATTCGCC
____________________________________________________________
consensus ATCTCTTCCTTGCACATCACCCATGGGACTCCTGTGTTCGTCTCAAGAGCCATATTCGCC
. : . : . : . : . : . :
JMFS071H11+ GCNCAATTCGCGTACTGATAGCCAGCATTACCAAGCACCTTGGCTTGGTGACCATATTCA
____________________________________________________________
consensus GCNCAATTCGCGTACTGATAGCCAGCATTACCAAGCACCTTGGCTTGGTGACCATATTCA
. : . : . : . : . : . :
JMFS071H11+ TTCTCTATCTGTGTGAGTATGATTGGGCCACCCTGAGACTCAAACAGATTATGGCTCTTC
JMFS151D02+ TC
____________________________________________________________
consensus TTCTCTATCTGTGTGAGTATGATTGGGCCACCCTGAGACTCAAACAGATTATGGCTCTTC
. : . : . : . : . : . :
JMFS071H11+ ATCAAGTTCACAATTTTCTCTGTGAACCCTTTCATAGCCATCTTGAATGGTTCATTATCT
JMFS151D02+ ATCAAGTTCACAATTTTCTCTGTGAACCCTTTCATAGCCATCTTGAATGGTTCATTATCT
JMFS048C04+ AGCCATCTTGAATGGTTCATTATCT
JMFS163D07+ GCCATCTTGAATGGTTCATTATCT
JMFS094D01+ CTGTGAACCCTTCNATAGCCATCTGGAATGGTTCATTATCT
JMFS118G10+ CTGTGAACCCTTTCATAGCCATCTTGAATGGTTCATTATCT
____________________________________________________________
consensus ATCAAGTTCACAATTTTCTCTGTGAACCCTTTCATAGCCATCTTGAATGGTTCATTATCT
. : . : . : . : . : . :
JMFS071H11+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
JMFS151D02+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
JMFS048C04+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
JMFS163D07+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
JMFS094D01+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
JMFS118G10+ GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
____________________________________________________________
consensus GTTCTGAAGCTAATACCAGGAACATACTTCAGCCACACTGGGAACCCACCAAAATTCCAT
. : . : . : . : . : . :
JMFS071H11+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFS151D02+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFS048C04+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFS163D07+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFS094D01+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFS118G10+ TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFF046B19+ ATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
JMFF006L05+ CGTC
JMFF008A20+ C
____________________________________________________________
consensus TCTCCACAAACATAAGGCCCAATCCGAAGATGGGCATAAAGCCCTGCTTTCTGAATCGTC
. : . : . : . : . : . :
JMFS071H11+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFS151D02+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFS048C04+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFS163D07+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFS094D01+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFS118G10+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFF046B19+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFF006L05+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFF008A20+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
JMFF031H19+ TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
____________________________________________________________
consensus TTCACAAACCTTACCAGGTCATACCTCCCTTCAAAATCATAATTGCCAGGGGAAGGCTCA
. : . : . : . : . : . :
JMFS071H11+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFS151D02+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFS048C04+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFS163D07+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFS094D01+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFS118G10+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFF046B19+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFF006L05+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFF008A20+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
JMFF031H19+ TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
____________________________________________________________
consensus TGGACATTCCAGAACACGTAGGTTTCAACCACGTCCAATCCTCCTTTTTTAGCTTTGTTA
. : . : . : . : . : . :
JMFS071H11+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFS151D02+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFS048C04+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFS163D07+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFS094D01+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFS118G10+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFF046B19+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFF006L05+ ATAACATCTTCCCACATCTCGGGTGTGCTTNTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFF008A20+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
JMFF031H19+ ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
____________________________________________________________
consensus ATAACATCTTCCCACATCTCGGGTGTGCTTCTGGGATAGTGAATGGAACCAGAGAAAAGC
. : . : . : . : . : . :
JMFS071H11+ AATCTTCTTTGGCCATTGATTACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFS151D02+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFS048C04+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFS163D07+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFS094D01+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFS118G10+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFF046B19+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFF006L05+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFF008A20+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
JMFF031H19+ AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
____________________________________________________________
consensus AATCTTCTTTGGCCATTGATCACTATTGCCTTCCTGTCATAAGTAACACTGCAATGAATC
. : . : . : . : . : . :
JMFS071H11+ AGCCCACAATT-AGGAGGAACACCATGCACAACAACAAT
JMFS151D02+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFS048C04+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFS163D07+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFS094D01+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFS118G10+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFF046B19+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFF006L05+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFF008A20+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
JMFF031H19+ AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
____________________________________________________________
consensus AGCCCACAATTGAGGAGGAACACCATGCACAACAACAATGCCCCCTTCTCCATCATTCCT
. : . : . : . : . : . :
JMFS151D02+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFS048C04+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFS163D07+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFS094D01+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFS118G10+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFF046B19+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFF006L05+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFF008A20+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
JMFF031H19+ TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
____________________________________________________________
consensus TCACCTTTGAACCTCTCTCTCTCTCTCTCTCACTATAATCCTCAAGAATGCATACGTAAA
. : . : . : . : . : . :
JMFS151D02+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFS048C04+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFS163D07+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFS094D01+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFS118G10+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFF046B19+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFF006L05+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFF008A20+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
JMFF031H19+ ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
____________________________________________________________
consensus ACACCCAAAACCAGAGAGAATGAGGTGTTGTTTAGTTGGAGTTTGCGTGAGATGCAAGAT
. : . : . : . : . : . :
JMFS151D02+ GGTTCATTTTC
JMFS048C04+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGT
JMFS163D07+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGT
JMFS094D01+ GGTTCATTTTCCTCTCTCGACAGCA
JMFS118G10+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCA
JMFF046B19+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCACAGACTAAGACCAAGAAC
JMFF006L05+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCACAGACTAAGACCAAGAAC
JMFF008A20+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCACAGACTAAGACCAAGAAC
JMFF031H19+ GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCACAGACTAAGACCAAGAACCGC
____________________________________________________________
consensus GGTTCATTTTCCTCTCTCGACAGCAGCACAGTGAACTCACAGACTAAGACCAAGAACCGC