Contig 007406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029P18Sequence466007406 (6)gb|ADB93061.1|9e-06hypothetical protein [Jatropha curcas] gb|KDP35203.1| hypothetical protein JCGZ_431007406 (6)ref|XP_009765504.1|51.2PREDICTED: uncharacterized protein LOC104217048 [Nicotiana sylvestris]
JMSF015J23Sequence404007406 (6)gb|ADB93061.1|7e-06hypothetical protein [Jatropha curcas] gb|KDP35203.1| hypothetical protein JCGZ_492007406 (6)ref|XP_009765504.1|52.0PREDICTED: uncharacterized protein LOC104217048 [Nicotiana sylvestris]
JMSF033L07Sequence296007406 (6)331007406 (6)

Alignment

This contig is upended


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JMSF015J23-                                                         GATGCACATGGCAA
rJMSF015J23+                                                        GATGCACATGGCAA
                      ____________________________________________________________
consensus                                                           GATGCACATGGCAA
 
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JMSF015J23-           TTGGCAACCTTATCCACTCCTGTCTAAGAACCCACCTGCTTCTGTTATATATGCCCTGTG
rJMSF015J23+          TTGGCAACCTTATCCACTCCTGTNTAAGAACCCNCCTGCTTCTGTTATATATGCCCTGTG
                      ____________________________________________________________
consensus             TTGGCAACCTTATCCACTCCTGTCTAAGAACCCACCTGCTTCTGTTATATATGCCCTGTG
 
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JMSF015J23-           AATTGGCCTATCCAGATATGCCCATTGAGCAAAAGCAACTCTGAAAGCTAAGCTACACAT
rJMSF015J23+          AATTGGCCTATCCAGATATGCCCNTTGAGCAAAAGCAACTNTGAAAGCTAAGCTACACAT
rJMFF029P18+                       AGATATGCCCATTGAGCAAAAGCAACTNTGAAAGCTAAGCTACACAT
JMFF029P18-                        AGATATGCCCATTGAGCAAAAGCAACTCTGAAAGCTAAGCTACACAT
                      ____________________________________________________________
consensus             AATTGGCCTATCCAGATATGCCCATTGAGCAAAAGCAACTCTGAAAGCTAAGCTACACAT
 
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JMSF015J23-           ATATATGGCGGACATAGCTATCCTGGTGGCGGAGGAATACGAGAGGAGGATCAAGAATGC
rJMSF015J23+          ATATATGGCGGACATAGCTATCCTGGTGGCGGAGGAATACGAGAGGAGGATCAAGAATGC
JMSF033L07-                                          GAGGAATACGAGAGGAGGATCAAGAATGC
rJMSF033L07+                                         GAGGAATACGAGAGGAGGATCAAGAATGC
rJMFF029P18+          ATATATGGCGGACATAGCTATCCTGGTGGCGGAGGAATACGAGAGGAGGATCAAGAATGC
JMFF029P18-           ATATATGGCGGACATAGCTATCCTGGTGGCGGAGGAATACGAGAGGAGGATCAAGAATGC
                      ____________________________________________________________
consensus             ATATATGGCGGACATAGCTATCCTGGTGGCGGAGGAATACGAGAGGAGGATCAAGAATGC
 
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JMSF015J23-           AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTCTTCTTCCTCTTT
rJMSF015J23+          AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTNTTNTTCCTCTTT
JMSF033L07-           AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTCTTCTTCCTCTTT
rJMSF033L07+          AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTNTTNTTCCTCTTT
rJMFF029P18+          AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTNTTNTTCCTCTTT
JMFF029P18-           AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTCTTCTTCCTCTTT
                      ____________________________________________________________
consensus             AAGAAAACTGGGCGGCGGCGGCAGTGAGGGTCAGAAACTTGAAGGCTCTTCTTCCTCTTT
 
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JMSF015J23-           GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
rJMSF015J23+          GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
JMSF033L07-           GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
rJMSF033L07+          GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
rJMFF029P18+          GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
JMFF029P18-           GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
                      ____________________________________________________________
consensus             GGTGAAGGTGAAGCTCAGTGGTGGAGAGGAGAAGAGGTTAGAGGTGATGATAATGAAGAA
 
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JMSF015J23-           CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCAGAAATGGATTCTTCTCTGC
rJMSF015J23+          CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCNGAAATGGATTNTTCTNTGC
JMSF033L07-           CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCAGAAATGGATTCTTCTCTGC
rJMSF033L07+          CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCNGAAATGGATTNTTCTCTGC
rJMFF029P18+          CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCAGAAATGGATTNTTCTNTGC
JMFF029P18-           CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCAGAAATGGATTCTTCTCTGC
                      ____________________________________________________________
consensus             CAAGGTTTTGCAGCCTCATTTTGAGGTTGCTGTTGCAGCCAGAAATGGATTCTTCTCTGC
 
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JMSF015J23-           TTAATTCATCACCCAAATAAATTTTTAATT                              
rJMSF015J23+          TTAATTCATCNCCCAAATAAATTTTTAATTTTTTTTTTTTTAAATTTTCTTGCCAAGAGT
JMSF033L07-           TTAATTCATCACCCAAATAAATTTTTAATTTTTTTTTTTTTAAATTTTCTTGCCAANAGT
rJMSF033L07+          TTAATTCATCNCCCAAATAAATTTTTAATTTTTTTTTTTTTAAATTTTCTTGCCAAGAGT
rJMFF029P18+          TTAATTCATCACCCAAATAAATTTTTAA-TTTTTTTTTTTTAAATTTTCTTGCCAAGAGT
JMFF029P18-           TTAATTCATCACCCAAATAAATTTTTAA-TTTTTTTTTTTTAAATTTTCTTGCCAAGAGT
                      ____________________________________________________________
consensus             TTAATTCATCACCCAAATAAATTTTTAATTTTTTTTTTTTTAAATTTTCTTGCCAAGAGT
 
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rJMSF015J23+          TGTTGATTGTTTTTAATTTCTTCTC                                   
JMSF033L07-           TGTTGATTGTTTTTAATTTCTTC                                     
rJMSF033L07+          TGTTGATTGTTTTTAATTTCTTCTC                                   
rJMFF029P18+          TGTTGATTGTTTTTAATTTCTTCTCAATGTGTCATGTTATTTACCTTTGATGATGAAATG
JMFF029P18-           TGTTGATTGTTTTTAATTTCTTCTCAATGNGTCATGTTATTTACCTTTGATGATGAAATG
                      ____________________________________________________________
consensus             TGTTGATTGTTTTTAATTTCTTCTCAATGTGTCATGTTATTTACCTTTGATGATGAAATG
 
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rJMFF029P18+          TGTAAATAGATGATATGAAACCCTA                                   
JMFF029P18-           TGTAAATAGATGATATGAAACCCTATGGAATTTTACTATTTCAAAGTAGTANAAAAAAAA
                      ____________________________________________________________
consensus             TGTAAATAGATGATATGAAACCCTATGGAATTTTACTATTTCAAAGTAGTANAAAAAAAA