Contig 007401:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028C21Sequence620007401 (3)ref|XP_009767944.1|5e-48PREDICTED: palmitoyl-protein thioesterase 1-like [Nicotiana sylvestris]557007401 (3)ref|XP_002274560.1|6e-49PREDICTED: palmitoyl-protein thioesterase 1 [Vitis vinifera] emb|CBI16648.3| unn
JMFN011I01Sequence616007401 (3)ref|XP_009605499.1|2e-51PREDICTED: palmitoyl-protein thioesterase 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF028C21-                                            ATGGATAAATAACATGATATAAGAAG
                      ____________________________________________________________
consensus                                               ATGGATAAATAACATGATATAAGAAG
 
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rJMFF028C21-          ATTAATTTATTGTATATGGATAATAATTATAGAGTATTTTAAAGAATGGATGCGCCCACA
                      ____________________________________________________________
consensus             ATTAATTTATTGTATATGGATAATAATTATAGAGTATTTTAAAGAATGGATGCGCCCACA
 
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rJMFF028C21-          GATCCTCCTGGTTCATGCTAGTGATGCATCCTATCATTTCATGTATGGAACAATATACCG
                      ____________________________________________________________
consensus             GATCCTCCTGGTTCATGCTAGTGATGCATCCTATCATTTCATGTATGGAACAATATACCG
 
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rJMFF028C21-          TTTAATTTCATCAACAGTTATTACAAGGTGAGCGCCAGGCACCTTGAAGAACTTAACTTT
                      ____________________________________________________________
consensus             TTTAATTTCATCAACAGTTATTACAAGGTGAGCGCCAGGCACCTTGAAGAACTTAACTTT
 
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rJMFF028C21-          TCCTGCTTCATCCAATGTTCTAAAACCGAAAGTGTCCTTTATGTAAACTTGAGTCTTCTG
                      ____________________________________________________________
consensus             TCCTGCTTCATCCAATGTTCTAAAACCGAAAGTGTCCTTTATGTAAACTTGAGTCTTCTG
 
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rJMFF028C21-          TACAGGCACAGGCGCGGAGAAATCCCCATCTGGATAATAGCCGAAGTGAGAACTTATTTG
                      ____________________________________________________________
consensus             TACAGGCACAGGCGCGGAGAAATCCCCATCTGGATAATAGCCGAAGTGAGAACTTATTTG
 
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rJMFF028C21-          TGGCATGATAATTGTATCAGCTTGAAACAAGATGAGAACAAGTAGTGTGAGGCTAGTGAA
                      ____________________________________________________________
consensus             TGGCATGATAATTGTATCAGCTTGAAACAAGATGAGAACAAGTAGTGTGAGGCTAGTGAA
 
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rJMFF028C21-          TCTTTTCTTGCGGATTGCACTTTGATCGTCTTGGACTTCGTTGTTTATCTTTGGCAGAAA
                      ____________________________________________________________
consensus             TCTTTTCTTGCGGATTGCACTTTGATCGTCTTGGACTTCGTTGTTTATCTTTGGCAGAAA
 
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rJMFF028C21-          TCTGCAGCCTGACAAGTATCCCTTCATATCATTTGGAATCTTGATATAGCCACTAGGAGC
JMFN011I01+                                      ATCATTTGGAATCTTGATATAGCCACTAGGAGC
JMFF028C21+                                                   TTGATATAGCCACTAGGAGC
                      ____________________________________________________________
consensus             TCTGCAGCCTGACAAGTATCCCTTCATATCATTTGGAATCTTGATATAGCCACTAGGAGC
 
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rJMFF028C21-          CAAGTGATCTTGAGTATCGGGAGTGTATACTCCCTTTTCATAATATTGCCC         
JMFN011I01+           CAAGTGATCTTGAGTATCGGGAGTGTATACTCCCTTTTCATAATATTGCCCAATCGTTCC
JMFF028C21+           CAAGTGATCTTGAGTATCGGGAGTGTATACTCCCTTTTCATAATATTGCCCAATCGTTCC
                      ____________________________________________________________
consensus             CAAGTGATCTTGAGTATCGGGAGTGTATACTCCCTTTTCATAATATTGCCCAATCGTTCC
 
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JMFN011I01+           GCACCAGGGAAATTTTCCGCAAGGAAAGGTTGAAGAATGACCAGCATTTGGCCCTCCTAC
JMFF028C21+           GCACCAGGGAAATTTTCCGCAAGGAAAGGTTGAAGAATGACCAGCATTTGGCCCTCCTAC
                      ____________________________________________________________
consensus             GCACCAGGGAAATTTTCCGCAAGGAAAGGTTGAAGAATGACCAGCATTTGGCCCTCCTAC
 
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JMFN011I01+           TGAGATGAAACTCTTCACCGGTGGACCATCGCATGTCTCAATTACTCCTCTGCCAACCAT
JMFF028C21+           TGAGATGAAACTCTTCACCGGTGGACCATCGCATGTCTCAATTACTCCTCTGCCAACCAT
                      ____________________________________________________________
consensus             TGAGATGAAACTCTTCACCGGTGGACCATCGCATGTCTCAATTACTCCTCTGCCAACCAT
 
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JMFN011I01+           GTTGCCCTGGGAGAGAGCAACCATGTGGTAACCTCCTTGTAGGTGTGCCATTCCCTTGAT
JMFF028C21+           GTTGCCCTGGGAGAGAGCAACCATGTGGTAACCTCCTTGTAGGTGTGCCATTCCCTTGAT
                      ____________________________________________________________
consensus             GTTGCCCTGGGAGAGAGCAACCATGTGGTAACCTCCTTGTAGGTGTGCCATTCCCTTGAT
 
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JMFN011I01+           CTTGCCACAAGCATCTTTAACTTGGCTCTCCATTGGCATCATCCATGAATCACGTAGTCC
JMFF028C21+           CTTGCCACAAGCATCTTTAACTTGGCTCTCCATTGGCATCATCCATGAATCACGTAGTCC
                      ____________________________________________________________
consensus             CTTGCCACAAGCATCTTTAACTTGGCTCTCCATTGGCATCATCCATGAATCACGTAGTCC
 
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JMFN011I01+           ATTTCCAACTTCCACGCATGATCCTTGAACACGTAACAAGGATTTAAGTGTCTGGGTGTA
JMFF028C21+           ATTTCCAACTTCCACGCATGATCCTTGAACACGTAACAAGGATTTAAGTGTCTGGGTGTA
                      ____________________________________________________________
consensus             ATTTCCAACTTCCACGCATGATCCTTGAACACGTAACAAGGATTTAAGTGTCTGGGTGTA
 
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JMFN011I01+           ATAAACAGTTCCTGAATCTTGGCAAAACATTGAAATACCATGGAGAACAATAAAAGGTGT
JMFF028C21+           ATAAACAGTTCCTGAATCTTGGCAAAACATTGAAATACCATGGAGAACAATAAAAGGTGT
                      ____________________________________________________________
consensus             ATAAACAGTTCCTGAATCTTGGCAAAACATTGAAATACCATGGAGAACAATAAAAGGTGT
 
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JMFN011I01+           AGAAGATGAGAGTGGAATGGAAGAGAAGATGGCAAGAAGAACAATAAAAGTAGTCAAGAA
JMFF028C21+           AGAAGATGAGAGTGGAATGGAAGAGAAGATGGCAAGAAGAACAATAAAAGTAGTCAAGAA
                      ____________________________________________________________
consensus             AGAAGATGAGAGTGGAATGGAAGAGAAGATGGCAAGAAGAACAATAAAAGTAGTCAAGAA
 
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JMFN011I01+           AGAGAAACAACGAGCCATATATGATTGTGTTGAAGATTGAACAAGCTAGCTTCTTCAGTT
JMFF028C21+           AGAGAAACAACGAGCCATATATGATTGTGTTGAAGATTGAACAAGCTAGCTTCTTCAGTT
                      ____________________________________________________________
consensus             AGAGAAACAACGAGCCATATATGATTGTGTTGAAGATTGAACAAGCTAGCTTCTTCAGTT
 
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JMFN011I01+           CTTTTGTGAAAATTTTATGGTCTATATGAATTCATGAAGAATA                 
JMFF028C21+           CTTTTGTGAAAATTTTATGGTCTATATGAATTCATGAAGAATAGGTACAGGAGAGAATAT
                      ____________________________________________________________
consensus             CTTTTGTGAAAATTTTATGGTCTATATGAATTCATGAAGAATAGGTACAGGAGAGAATAT